Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PVRIG Gene 0 11.02 26.50 21.40 19.24 33.28 78.35 35.78 26.19 37.78 19.13 13.17 15.64 21.99 7.52 5.16 7.33 3.99 23.18 18.12 27.40 3.12 5.75 3.25 2 471803 Transcript 0 17.44 65.39 52.40 45.38 81.47 215.21 87.74 60.18 89.08 45.56 22.93 37.99 54.39 16.98 13.33 11.72 7.14 54.22 49.01 67.10 7.30 14.21 8.03 3 317271 Transcript 0 12.35 0.60 0.92 2.08 0.77 4.70 0.14 5.18 3.98 1.10 14.24 0.73 0.08 6.38 2.55 11.22 3.30 1.97 0.53 0.16 0.05 0.01 0.00 4 ER1a ExonRegion 0 34.88 130.79 103.50 90.77 162.94 375.74 175.48 118.71 178.17 91.12 43.44 75.98 108.77 26.72 22.20 19.08 14.27 108.44 88.43 134.20 14.60 28.42 16.06 5 E1_Da NovelBoundary 0 0.00 85.45 25.28 35.59 75.21 179.73 0.00 2.55 95.54 0.00 0.00 5.40 5.68 9.89 5.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E1a_E2b KnownJunction 0 0.00 0.00 1.30 0.00 0.00 54.68 0.00 1.64 0.00 0.00 2.42 0.00 0.00 7.24 4.45 4.36 0.00 0.00 9.60 0.00 0.00 0.00 0.00 7 E2_Aa NovelBoundary 0 17.56 87.62 106.32 63.43 60.19 306.30 168.92 114.43 184.26 93.64 51.80 50.12 38.96 34.32 29.30 30.25 60.96 208.59 114.54 177.24 30.58 29.15 51.22 8 E2_Ab NovelBoundary 0 39.41 108.34 88.47 60.13 68.51 209.25 116.15 86.13 174.25 74.27 44.01 11.70 0.00 19.78 19.66 42.21 22.44 221.24 132.05 179.42 36.63 29.15 29.88 9 ER2a ExonRegion 0 0.00 0.58 1.23 0.39 0.00 2.62 0.38 0.74 1.24 0.33 0.14 0.31 1.01 0.35 1.66 0.21 0.00 1.45 0.68 0.15 0.00 0.15 0.00 10 ER2b ExonRegion 0 1.26 0.31 1.21 0.17 0.00 9.70 0.12 1.75 0.43 0.15 0.40 0.15 0.05 1.27 1.55 0.90 0.00 0.58 1.74 0.00 0.00 0.02 0.00 11 E2_Da KnownBoundary 0 46.16 67.03 243.69 108.94 49.15 311.01 91.95 158.67 279.31 186.82 37.64 6.30 8.12 33.37 33.75 41.95 53.02 285.41 142.87 222.62 49.24 27.31 22.79 12 ER2c ExonRegion 0 0.94 0.00 0.00 2.52 0.00 3.47 0.00 0.98 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2_Db NovelBoundary 0 181.37 85.31 428.99 215.19 183.53 370.53 288.07 351.31 321.87 309.99 160.15 25.06 39.61 275.71 92.59 190.04 199.63 618.65 288.48 331.99 163.09 127.79 137.35 14 E2b_E3a KnownJunction 0 3.78 0.00 0.00 3.13 0.00 17.55 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E3_Aa NovelBoundary 0 3.33 25.98 61.80 39.52 29.54 77.46 21.37 61.41 108.68 37.26 5.00 6.15 13.15 16.72 8.90 20.42 0.00 231.23 45.74 98.11 12.42 12.37 8.62 16 ER3a ExonRegion 0 6.30 0.00 0.00 0.79 0.00 4.62 0.21 0.63 0.31 0.00 0.00 0.00 0.00 0.00 0.33 0.00 0.00 1.72 0.00 0.00 0.00 0.00 0.00 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 6.16 0.17 0.83 1.78 0.47 2.38 0.18 2.92 2.91 1.91 12.20 1.22 0.00 3.90 0.74 7.54 2.04 1.02 0.21 0.30 0.00 0.00 0.00 19 E4_Da NovelBoundary 0 14.45 13.09 56.36 28.87 15.79 68.94 28.18 42.18 87.04 27.61 38.11 6.30 20.45 4.94 19.66 7.52 7.76 182.44 45.84 72.74 14.21 6.25 11.35 20 E4a_E5a KnownJunction 0 117.50 6.05 6.92 12.65 7.22 21.18 0.00 34.05 24.28 7.36 118.24 6.30 0.00 55.15 23.24 101.94 23.47 12.89 4.52 0.00 0.00 0.00 0.00 21 E5_Aa NovelBoundary 0 16.82 12.43 57.60 18.08 10.78 79.22 27.95 47.65 67.56 39.59 11.58 0.00 15.58 18.84 20.40 34.44 4.77 173.40 88.47 109.30 17.48 25.35 19.12 22 ER5a ExonRegion 0 9.32 0.35 1.36 1.60 0.86 2.76 0.04 10.70 9.54 2.93 24.02 0.92 0.00 7.55 2.26 13.76 9.23 3.94 0.70 0.89 0.00 0.00 0.00 23 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 Ix Intron 0 0.00 7.24 17.33 2.41 7.93 38.06 7.07 9.16 17.46 9.12 3.44 4.23 2.29 14.96 8.70 10.58 1.96 45.81 30.22 70.66 10.45 8.65 1.74 25 Ix_SR1 SilentIntronRegion 0 0.00 8.37 18.99 2.57 9.96 45.22 8.08 9.81 18.85 9.77 3.95 3.88 2.55 17.51 10.41 12.24 2.09 50.92 34.85 81.70 12.67 10.63 1.64 26 Ix_SR2 SilentIntronRegion 0 0.00 2.24 8.95 1.91 0.00 7.70 2.38 6.57 11.49 6.88 0.97 5.63 0.00 3.25 2.03 3.86 0.99 24.76 11.79 21.91 0.00 1.04 2.35 27 ER6a ExonRegion 0 0.00 0.00 0.00 1.34 0.00 0.00 0.00 7.71 7.15 0.06 15.59 0.00 0.00 7.30 1.66 7.75 4.82 0.88 0.00 0.00 0.00 0.00 0.00 28 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER7a ExonRegion 0 4.22 0.00 0.66 0.77 0.73 1.83 0.84 1.93 1.10 0.62 0.70 0.00 0.00 2.35 0.75 3.47 0.01 1.74 0.29 0.58 0.60 0.00 0.00