Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	GAL3ST4	Gene	0	41.02	24.54	229.05	32.89	104.57	41.40	51.01	136.59	74.59	93.50	2.55	8.20	9.77	8.99	9.79	12.13	7.38	41.41	43.70	39.57	87.37	20.54	26.27
2	360039	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	426974	Transcript	0	0.00	0.00	0.00	1.36	5.35	0.00	1.32	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	423751	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	498000	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	460995	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	495882	Transcript	0	18.18	15.61	84.62	9.56	56.22	17.89	36.97	54.53	26.19	41.65	1.76	0.92	0.46	1.18	0.86	2.22	0.15	19.79	36.90	29.68	2.97	1.33	3.31
8	482469	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	413800	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	411994	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	IG8	Intergenic	0	6.45	9.84	64.71	6.19	61.90	28.15	38.42	31.42	28.07	33.07	1.63	1.50	0.41	2.04	0.86	2.81	0.69	17.00	21.77	20.82	2.32	0.22	2.47
12	IG8_SR1	SilentIntergenicRegion	0	6.48	9.88	64.98	6.22	62.16	28.27	38.58	31.55	28.18	33.20	1.63	1.51	0.41	2.05	0.86	2.82	0.70	17.07	21.86	20.90	2.33	0.22	2.48
13	ER1a	ExonRegion	0	3.24	0.90	56.30	5.15	40.72	25.89	28.55	18.21	12.45	15.74	0.06	0.00	4.32	1.28	1.14	2.58	1.27	17.39	22.85	17.44	5.08	1.31	2.92
14	E1_Ab	KnownBoundary	0	13.19	6.18	61.32	8.49	29.03	19.25	20.80	20.99	17.88	25.38	0.00	0.00	13.15	0.00	4.45	19.40	7.11	12.85	25.79	26.08	25.76	13.96	24.24
15	ER1b	ExonRegion	0	12.19	2.79	21.56	4.86	14.42	10.48	13.18	7.58	8.37	14.84	1.36	0.00	2.45	4.78	4.63	21.78	6.65	8.91	18.40	11.05	53.55	15.64	41.99
16	E1_Da	NovelBoundary	0	26.67	6.64	40.71	13.75	66.13	19.59	29.72	28.05	27.92	39.30	0.00	0.00	0.00	2.12	0.00	3.42	0.00	22.97	27.58	24.10	0.00	3.12	4.35
17	E1a_E2f	KnownJunction	0	7.04	0.00	0.00	0.00	3.57	4.88	3.71	0.00	3.10	2.77	0.00	0.00	6.17	0.00	8.90	0.00	4.39	0.00	0.00	0.00	47.51	3.12	15.28
18	I1	Intron	0	10.98	6.69	56.84	5.91	35.22	14.62	23.79	38.47	24.46	44.35	0.73	1.35	0.00	1.03	0.52	3.39	0.42	18.02	18.95	28.01	2.23	1.58	2.97
19	I1_SR1	SilentIntronRegion	0	11.14	6.78	57.64	5.98	35.71	14.83	24.14	39.00	24.82	44.99	0.74	1.37	0.00	1.04	0.53	3.44	0.42	18.28	19.23	28.39	2.26	1.61	3.02
20	E2_Aa	NovelBoundary	0	20.23	18.22	59.31	6.43	31.66	22.71	37.49	56.23	41.72	57.27	2.53	0.00	0.00	2.24	0.00	3.59	0.00	11.11	32.66	40.33	0.00	0.00	4.35
21	E2_Ac	NovelBoundary	0	7.04	9.34	36.19	2.06	20.80	5.00	18.28	19.76	10.56	9.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.46	0.00	14.89	3.09	0.00	0.00
22	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E2_Da	NovelBoundary	0	21.56	6.71	38.05	3.70	38.96	17.60	31.80	36.43	8.36	21.95	0.00	0.00	0.00	0.00	0.00	3.76	0.00	25.45	16.85	23.59	0.00	0.00	0.00
24	E2a_E2f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.72	0.00	0.00
25	ER2b	ExonRegion	0	0.09	0.00	0.11	0.00	0.12	0.00	0.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.28	0.00	0.86	0.00	0.00
26	ER2c	ExonRegion	0	2.12	2.03	2.76	0.00	4.01	0.00	5.96	2.59	1.24	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.46	7.17	1.60	2.20	0.00	0.00
27	ER2d	ExonRegion	0	8.79	12.36	9.39	0.66	32.80	6.25	21.12	9.04	2.44	5.71	1.64	0.00	0.00	0.00	0.00	0.00	0.00	3.51	28.67	20.89	0.00	0.00	3.76
28	E2_Ad	KnownBoundary	0	16.82	24.73	65.91	13.22	73.01	16.52	48.23	43.91	24.25	31.75	2.63	0.00	0.00	0.00	0.00	0.00	0.00	15.59	57.04	37.78	0.00	0.00	8.71
29	ER2e	ExonRegion	0	8.62	9.58	52.91	4.98	38.71	10.83	25.97	34.98	13.18	23.42	0.74	1.23	1.33	0.30	2.82	0.32	1.14	23.12	28.84	16.86	2.05	0.00	1.27
30	E2_Db	KnownBoundary	0	9.48	6.38	155.88	14.45	65.53	46.05	55.29	109.30	39.15	55.95	2.26	0.00	0.00	2.47	0.00	4.02	0.00	47.09	43.77	40.72	8.22	0.00	3.67
31	E2b_E2f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER2f	ExonRegion	0	27.57	18.87	159.84	18.45	79.64	29.52	52.83	100.01	49.95	77.59	1.89	1.84	0.93	2.36	1.72	4.45	0.30	36.07	45.14	38.46	5.94	2.66	2.85
33	E2_Ae	KnownBoundary	0	6.00	0.00	64.43	15.05	36.25	24.64	12.85	55.12	29.51	42.07	0.00	0.00	0.00	0.00	0.00	0.00	4.58	15.30	16.00	11.57	2.59	0.00	0.00
34	E2_Af	KnownBoundary	0	16.45	11.71	64.60	2.03	25.47	10.16	32.68	41.85	17.56	35.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.18	21.37	13.93	5.62	0.00	4.18
35	ER2g	ExonRegion	0	35.98	16.27	177.68	21.81	123.08	51.35	54.28	131.36	62.99	102.07	0.00	0.00	0.00	0.00	14.51	5.94	9.90	33.26	44.60	31.91	81.54	4.17	29.37
36	ER2h	ExonRegion	0	43.65	18.99	210.28	17.72	115.51	43.98	65.45	142.55	67.14	107.66	3.32	3.10	1.95	5.18	6.51	4.32	6.35	42.18	36.66	37.58	87.61	4.68	14.18
37	E2_Ag	KnownBoundary	0	51.34	23.61	263.00	27.07	125.38	50.65	58.52	142.16	86.37	113.14	9.95	0.00	6.82	6.89	4.45	4.36	9.16	49.16	24.85	52.73	46.83	8.02	11.69
38	ER2i	ExonRegion	0	22.36	12.33	189.03	16.49	64.27	27.71	37.98	115.72	69.44	85.13	2.75	3.48	7.23	9.44	6.87	13.15	4.72	41.97	43.45	40.34	80.21	10.88	30.31
39	E2_Dc	NovelBoundary	0	27.63	0.00	17.83	3.26	23.94	5.45	26.98	12.20	9.64	14.96	0.00	6.30	0.00	2.47	0.00	0.00	0.00	13.60	4.24	14.70	2.66	2.39	12.38
40	E2c_E3a	KnownJunction	0	17.19	14.87	216.08	12.85	64.94	26.75	44.83	98.62	73.99	86.58	0.00	0.00	0.00	10.30	0.00	0.00	0.00	62.14	27.77	33.05	91.43	4.65	8.02
41	E2c_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.85	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.15	0.00	0.00
42	ER3a	ExonRegion	0	31.41	14.63	197.65	19.73	51.52	31.62	28.48	137.32	81.14	99.61	1.43	2.51	6.87	15.10	6.10	10.22	4.46	51.41	39.18	45.59	107.27	16.55	28.44
43	E3_Da	KnownBoundary	0	40.97	29.53	269.54	33.56	70.71	57.75	46.99	159.16	100.81	111.77	0.00	0.00	6.17	21.66	0.00	24.69	9.44	54.35	60.43	78.17	127.57	14.57	27.91
44	ER3b	ExonRegion	0	18.63	11.68	203.75	26.37	62.31	46.79	50.15	123.24	93.92	111.15	0.00	3.02	7.53	10.83	3.03	9.46	6.55	28.56	39.62	43.36	118.63	12.19	37.60
45	E3_Db	NovelBoundary	0	19.19	12.50	172.23	17.95	85.82	45.37	45.36	154.23	103.36	119.83	0.00	11.55	6.17	11.77	0.00	0.00	7.67	24.62	22.21	24.74	100.14	8.14	26.72
46	E3_Dc	NovelBoundary	0	3.78	3.29	62.18	14.88	35.57	30.32	14.49	24.44	19.04	27.48	0.00	0.00	6.82	5.42	0.00	4.10	0.00	11.15	30.78	23.78	11.49	0.00	12.29
47	E3c_E4a	KnownJunction	0	31.56	9.01	161.38	16.31	66.72	29.02	36.26	161.09	83.13	87.84	0.00	12.15	5.84	4.77	4.82	28.62	8.04	23.63	17.98	24.35	110.15	16.53	31.93
48	ER3c	ExonRegion	0	15.57	8.72	150.52	19.34	57.14	36.26	32.07	133.43	82.43	94.86	0.00	10.06	16.64	8.07	2.90	15.44	7.35	21.40	20.45	18.46	104.85	11.43	28.80
49	I3	Intron	0	16.80	11.93	69.44	12.27	40.02	8.65	25.71	26.23	18.48	22.12	0.72	2.28	2.14	2.07	0.90	3.16	1.90	15.57	19.15	20.87	10.71	1.68	4.98
50	I3_SR1	SilentIntronRegion	0	16.84	11.96	69.59	12.30	40.11	8.67	25.77	26.29	18.52	22.17	0.72	2.28	2.15	2.07	0.91	3.17	1.90	15.60	19.19	20.92	10.73	1.68	5.00
51	E4_Aa	NovelBoundary	0	16.67	27.82	140.09	28.07	109.00	41.11	37.32	54.67	35.79	40.80	0.00	0.00	0.00	0.00	0.00	7.78	4.77	42.49	40.38	11.38	10.87	11.63	0.00
52	ER4a	ExonRegion	0	47.33	26.23	296.38	46.31	121.10	44.46	65.95	197.79	114.23	126.30	3.97	9.65	11.25	11.97	7.22	18.81	15.48	50.99	51.02	49.89	140.09	29.94	35.80
53	E4_Da	KnownBoundary	0	87.72	37.49	328.99	64.59	215.70	38.05	80.11	246.98	112.76	127.92	8.90	6.30	6.82	9.89	4.45	12.39	16.36	71.51	22.59	53.56	107.80	32.45	39.44
54	ER4b	ExonRegion	0	70.54	39.42	377.63	50.76	152.16	65.00	65.53	195.45	105.55	129.90	3.03	10.94	9.63	10.75	6.91	14.68	9.27	49.48	49.82	51.73	158.48	39.12	40.30
55	E4_Db	KnownBoundary	0	60.01	50.19	430.38	56.20	141.00	43.10	97.64	261.23	127.05	127.27	2.68	30.61	26.30	13.95	17.80	19.40	0.00	54.14	28.24	21.60	108.98	26.82	51.39
56	ER4c	ExonRegion	0	117.16	67.35	324.75	86.05	263.03	95.72	110.50	250.44	129.23	163.61	8.98	34.43	59.18	31.74	78.28	38.03	27.92	106.04	97.30	55.53	160.46	49.67	77.06
57	E4_Dc	KnownBoundary	0	1895.52	1656.35	3875.35	4706.56	1455.77	1005.95	1981.23	4677.80	4726.54	4263.64	553.72	301.30	516.20	264.05	520.68	1641.79	1415.24	6584.33	1810.88	1696.87	823.99	1509.34	1983.92
58	ER4d	ExonRegion	0	18.24	18.34	177.81	37.11	99.56	23.80	31.81	116.72	63.36	67.56	1.99	15.81	14.40	9.29	15.71	13.62	10.40	24.63	28.72	24.79	63.22	20.34	19.53
59	ER4e	ExonRegion	0	0.00	2.03	6.13	5.45	13.38	0.00	1.32	5.19	1.24	1.15	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.20	0.00	0.00
60	ER4f	ExonRegion	0	0.00	0.00	0.00	1.36	5.35	0.00	1.32	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00