Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 COPS6 Gene 0 142.56 96.33 476.50 191.44 160.15 202.44 181.55 171.48 96.81 165.79 103.78 83.03 64.03 189.77 279.70 154.28 166.73 202.09 147.41 167.54 251.62 161.30 145.99 2 303904 Transcript 0 55.42 19.01 107.47 39.20 31.55 41.36 37.97 45.88 25.95 48.19 18.66 27.44 15.71 40.28 86.10 53.76 51.29 34.53 39.44 33.47 43.51 42.43 35.63 3 465027 Transcript 0 42.51 23.43 47.76 22.13 30.81 41.72 38.92 27.25 20.63 16.78 12.12 15.33 26.18 17.28 27.87 26.30 23.05 29.68 34.10 36.29 24.03 15.76 29.71 4 419210 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 418625 Transcript 0 3.04 2.89 6.39 0.00 0.00 0.00 2.08 0.00 1.10 0.00 0.00 0.00 0.00 0.00 5.56 0.00 4.77 10.86 0.00 0.00 5.93 3.12 0.00 6 472107 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 416531 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 468499 Transcript 0 11.94 5.00 18.41 8.19 12.43 6.24 11.39 7.52 4.20 5.77 8.67 3.93 2.94 10.21 11.52 8.75 11.46 8.12 2.94 4.58 10.08 5.35 7.17 9 496358 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 474823 Transcript 0 37.49 10.61 48.33 27.45 29.86 43.08 25.30 15.97 13.76 14.92 11.77 8.44 5.99 25.81 24.88 22.71 19.17 19.78 18.81 12.38 36.38 20.29 14.00 11 426712 Transcript 0 2.74 0.00 6.09 8.92 4.33 13.51 2.25 7.11 2.55 2.79 2.68 6.30 6.82 9.77 9.39 0.00 8.32 0.00 22.02 8.56 5.93 10.53 4.01 12 483891 Transcript 0 81.42 16.92 67.26 45.88 43.03 39.49 48.51 42.18 15.55 25.29 15.97 9.30 3.31 26.33 27.61 18.88 23.65 17.25 18.28 23.33 18.12 12.04 14.30 13 ER1a ExonRegion 0 2.91 0.00 0.00 0.00 2.68 3.09 0.74 0.00 0.00 0.00 0.00 0.00 0.00 1.52 3.26 0.00 0.00 0.00 0.80 0.00 0.69 0.00 0.00 14 E1_Af KnownBoundary 0 3.63 2.43 1.30 0.00 11.63 0.00 1.72 0.00 0.00 0.00 0.00 0.00 0.00 2.41 6.30 0.00 0.00 1.78 0.00 0.00 5.99 0.00 0.00 15 E1_Ag KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1_Ah KnownBoundary 0 178.11 105.57 37.05 7.39 86.25 134.41 241.31 8.46 3.30 18.78 14.64 6.15 0.00 21.19 138.20 7.18 10.75 18.94 11.67 2.56 96.93 21.68 9.90 17 ER1b ExonRegion 0 6.70 3.05 1.02 0.00 7.58 14.06 11.47 0.00 0.00 0.00 0.00 0.00 0.00 3.25 13.54 0.00 3.30 0.00 3.19 0.00 7.35 0.00 0.00 18 ER1c ExonRegion 1 35.98 16.61 2.25 0.00 22.30 38.20 42.15 0.00 0.00 1.15 1.93 0.00 3.13 10.83 69.15 2.97 3.30 1.23 3.19 0.35 31.95 1.04 0.00 19 ER1d ExonRegion 1 50.80 28.47 2.45 0.00 34.78 51.35 62.23 0.00 0.00 2.29 3.87 0.00 4.69 16.24 89.94 5.94 3.30 3.70 3.19 2.13 41.87 2.08 0.00 20 ER1e ExonRegion 1 75.14 46.77 7.35 0.68 54.18 70.60 119.82 0.00 0.00 7.45 11.60 4.33 4.69 22.33 140.71 7.43 6.60 8.78 4.78 2.13 65.01 7.81 3.67 21 ER1f ExonRegion 1 142.34 86.43 14.70 2.04 102.35 104.53 214.81 0.00 0.00 13.76 29.48 4.33 8.21 29.23 248.06 11.15 20.63 20.33 9.56 2.13 114.04 25.52 18.35 22 ER1g ExonRegion 1 169.32 103.71 19.20 2.73 115.06 122.25 245.82 0.00 0.41 16.06 36.08 4.33 28.14 34.65 299.80 12.88 30.81 21.56 10.62 2.13 138.10 27.78 26.43 23 ER1h ExonRegion 1 334.55 196.51 143.63 54.06 254.15 278.58 324.88 39.41 31.85 68.95 91.27 16.81 56.91 70.92 320.30 76.58 106.62 113.27 82.08 70.18 300.29 87.37 143.60 24 E1_Da NovelBoundary 0 302.28 191.08 169.89 84.27 271.56 284.84 234.50 50.44 46.73 70.16 82.23 23.56 45.45 66.87 172.08 115.95 103.13 128.84 114.26 132.82 310.62 82.05 192.32 25 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E1b_E2a KnownJunction 1 168.70 195.10 390.70 178.07 142.28 186.20 232.30 140.31 88.37 134.87 71.39 96.33 118.01 36.38 141.91 102.62 83.50 274.01 141.18 121.38 231.36 105.57 173.71 27 E1b_E2b KnownJunction 0 3.04 2.89 6.39 0.00 0.00 0.00 2.08 0.00 1.10 0.00 0.00 0.00 0.00 0.00 5.56 0.00 4.77 10.86 0.00 0.00 5.93 3.12 0.00 28 ER1i ExonRegion 0 241.45 197.57 287.21 118.89 228.06 267.73 237.09 92.41 63.28 111.87 96.50 61.94 115.45 65.84 183.23 113.86 113.50 185.77 142.61 127.82 315.64 113.31 206.69 29 ER2a ExonRegion 1 126.46 152.01 289.80 124.36 145.83 182.92 187.34 101.11 67.31 106.09 57.99 76.85 105.53 48.72 112.42 88.42 63.54 182.47 117.06 100.53 212.11 86.99 146.83 30 ER2b ExonRegion 1 50.80 75.18 534.47 194.11 70.23 102.63 89.84 163.96 114.84 211.84 158.66 75.94 87.15 208.59 289.91 118.40 284.01 243.51 118.77 230.24 505.72 134.13 115.03 31 E2_Da KnownBoundary 0 3.78 0.00 32.32 10.79 0.00 0.00 4.50 4.97 6.66 1.29 2.11 0.00 0.00 4.59 4.45 4.36 4.77 8.58 18.54 0.00 5.19 9.19 8.62 32 E2a_E2c KnownJunction 0 91.57 123.53 1222.37 412.63 69.69 104.26 118.58 357.63 204.86 425.82 191.57 139.25 194.79 672.32 987.08 482.95 320.52 791.59 428.34 540.36 624.75 393.67 499.63 33 ER2c ExonRegion 0 7.94 1.99 40.39 13.96 11.39 34.92 12.52 11.18 7.23 5.87 2.51 4.65 4.13 7.37 9.56 9.01 4.44 18.63 14.96 6.24 9.23 4.87 7.00 34 E2_Ac KnownBoundary 0 23.63 11.71 52.69 14.08 15.70 31.74 12.23 11.01 1.65 15.07 2.11 6.30 6.82 4.89 8.90 3.25 8.51 12.64 21.18 8.95 35.71 3.12 3.93 35 ER2d ExonRegion 0 89.60 110.32 1117.13 410.11 83.62 147.77 130.08 348.14 201.94 388.61 184.43 137.46 194.25 574.26 920.91 569.91 315.24 791.91 418.61 495.03 560.84 384.93 587.57 36 ER2e ExonRegion 0 111.18 169.50 1319.41 549.86 724.36 1126.85 666.86 414.80 256.45 454.48 273.87 188.97 210.93 469.89 668.00 516.83 465.07 883.32 429.65 480.55 657.28 531.77 523.86 37 E2_Dc KnownBoundary 1 7.04 12.50 63.98 52.64 109.42 124.25 89.12 10.51 9.11 24.74 7.32 20.26 78.89 45.38 24.11 16.15 13.18 10.61 27.11 19.94 39.91 20.94 22.96 38 E2c_E2e KnownJunction 0 138.99 348.56 1325.77 522.54 707.98 1294.54 1258.50 375.46 221.29 427.00 341.82 255.98 207.94 493.91 588.17 310.60 428.52 449.52 394.18 505.27 698.76 419.94 309.70 39 E2c_E2h KnownJunction 0 3.19 0.00 0.00 0.00 8.66 0.00 2.25 3.61 0.00 0.00 8.05 0.00 0.00 4.77 5.93 8.54 4.58 0.00 0.00 0.00 0.00 0.00 0.00 40 ER2f ExonRegion 1 26.38 10.81 76.48 59.47 54.43 83.01 56.61 17.87 10.39 20.34 8.67 20.49 46.67 35.41 38.64 25.37 24.23 18.66 28.90 12.40 42.84 22.16 31.37 41 E2_Dd KnownBoundary 0 51.19 16.44 68.77 56.47 40.58 55.08 35.95 23.29 9.81 11.50 13.69 18.91 32.30 28.37 35.48 44.77 30.76 18.16 29.27 12.08 60.17 35.70 49.43 42 ER2g ExonRegion 1 63.72 22.23 64.79 46.93 56.34 64.93 46.36 33.32 22.88 24.52 13.29 25.60 29.53 36.65 31.03 35.69 31.41 21.89 36.80 20.04 31.85 28.74 37.73 43 E2_De KnownBoundary 0 228.11 120.04 235.15 198.41 79.80 85.75 151.61 197.16 193.55 161.14 47.43 19.36 21.43 31.02 63.54 115.27 122.11 241.18 142.87 81.88 102.30 37.35 90.48 44 ER2h ExonRegion 1 77.08 44.87 55.13 30.31 50.23 48.51 65.32 43.32 34.04 27.69 21.73 26.01 48.22 27.18 46.19 43.60 41.66 40.73 53.25 66.33 38.83 26.65 52.41 45 E2_Df NovelBoundary 0 62.68 0.00 4.61 10.42 15.79 45.83 38.73 2.09 1.79 2.74 11.37 0.00 6.82 2.30 0.00 11.19 0.00 1.82 0.00 7.86 10.19 2.69 11.44 46 ER2i ExonRegion 0 43.59 16.38 63.62 29.32 41.80 77.27 39.04 19.25 14.75 17.05 12.17 9.13 5.20 33.67 28.23 25.38 25.69 23.37 24.36 15.76 40.92 19.99 13.49 47 E2_Ae KnownBoundary 0 115.72 17.83 75.04 41.99 73.34 108.63 55.25 35.73 16.52 17.78 7.42 12.15 0.00 46.50 37.83 32.21 27.40 16.37 28.61 9.33 53.19 23.27 20.40 48 E2_Af KnownBoundary 1 419.26 390.46 557.73 272.06 318.17 476.71 536.80 186.07 113.37 190.61 189.31 122.89 30.03 232.80 295.45 204.31 242.64 223.72 268.71 267.11 420.33 298.02 238.08 49 ER2j ExonRegion 0 356.30 414.22 1336.33 537.59 505.53 899.38 881.48 379.96 232.24 413.04 331.39 236.78 167.55 517.59 657.58 345.89 448.92 510.36 398.94 441.82 700.17 473.32 357.66 50 E2_Ag KnownBoundary 1 191.14 241.54 1072.40 414.93 243.21 208.18 304.68 282.88 160.53 296.82 192.89 40.51 56.49 228.86 247.85 161.75 244.32 334.20 166.88 230.42 349.04 253.81 214.18 51 ER2k ExonRegion 0 355.10 429.99 1467.99 583.47 349.93 523.24 577.98 417.90 254.16 451.37 320.00 164.52 110.48 509.79 571.55 312.73 425.45 554.32 342.96 384.40 657.68 445.64 362.51 52 ER2l ExonRegion 0 459.79 390.77 1704.17 634.48 232.36 340.35 390.14 511.14 295.14 538.93 333.66 177.85 149.24 505.39 655.10 367.24 537.19 606.99 325.03 492.08 717.22 517.75 442.43 53 E2_Dg KnownBoundary 0 24.08 0.00 17.77 11.52 15.28 13.12 7.99 8.75 8.19 7.36 8.05 0.00 0.00 15.95 11.00 0.00 17.30 6.30 3.86 15.98 22.73 15.37 8.71 54 E2g_E2h KnownJunction 0 1230.37 656.00 2059.60 713.16 331.66 451.33 530.35 628.93 331.80 620.38 467.12 335.21 275.96 619.93 989.68 706.22 679.57 919.52 542.89 817.12 1034.65 866.58 674.37 55 ER2m ExonRegion 0 31.38 4.84 33.05 25.58 17.91 8.89 11.56 12.69 12.77 12.79 11.36 7.75 6.79 17.94 21.52 20.04 12.64 16.19 13.26 9.00 31.84 20.60 14.52 56 E2_Ah KnownBoundary 0 40.38 3.35 26.26 36.66 31.49 13.23 27.20 20.00 12.99 11.42 8.05 0.00 0.00 7.06 27.20 22.99 9.16 17.20 12.24 3.26 19.15 17.39 15.96 57 ER2n ExonRegion 0 563.47 412.26 1513.45 559.77 363.17 415.53 447.09 507.16 280.05 519.40 408.62 253.83 204.02 612.32 850.58 521.94 559.18 608.15 477.60 519.97 846.15 564.63 490.37 58 E2_Dh KnownBoundary 0 37.19 18.88 43.76 42.15 78.18 37.54 44.34 21.19 13.69 17.43 7.58 0.00 15.10 31.43 10.01 16.75 9.16 5.14 12.99 14.45 14.27 16.78 12.38 59 E2h_E2i KnownJunction 0 403.03 362.70 1101.47 412.73 281.49 383.76 456.95 380.18 237.44 415.98 328.50 256.88 157.94 644.71 993.51 411.09 507.06 485.21 421.19 565.60 759.31 510.63 404.88 60 E2h_E2j NovelJunction 0 2.96 3.35 8.93 1.66 0.00 0.00 6.40 0.00 7.73 2.74 6.42 12.60 0.00 7.30 15.20 3.67 0.00 0.00 3.58 0.00 0.00 2.69 0.00 61 ER2o ExonRegion 0 42.20 15.32 55.20 35.40 46.10 38.42 39.26 17.22 15.52 13.46 7.87 5.22 2.61 22.05 9.46 22.08 12.89 11.60 15.57 17.81 11.47 11.46 8.11 62 E2_Di KnownBoundary 0 112.39 18.88 61.88 62.50 61.63 37.08 43.32 32.78 19.24 11.98 5.11 7.20 6.82 24.96 15.08 24.35 0.00 5.06 0.00 13.93 8.65 23.57 8.54 63 ER2p ExonRegion 0 81.42 16.92 67.26 45.88 43.03 39.49 48.51 42.18 15.55 25.29 15.97 9.30 3.31 26.33 27.61 18.88 23.65 17.25 18.28 23.33 18.12 12.04 14.30 64 E2_Ai KnownBoundary 0 66.53 5.79 34.39 40.15 44.23 42.19 38.91 30.81 8.45 29.33 13.32 24.76 0.00 31.14 20.15 11.71 9.54 15.13 9.60 11.82 3.15 5.39 9.65 65 ER2q ExonRegion 1 425.01 303.57 1584.20 613.41 320.01 485.92 458.03 505.55 296.24 494.00 356.27 289.25 93.90 680.20 859.45 470.23 509.32 607.95 535.89 482.21 721.50 520.08 470.11 66 E2_Dj KnownBoundary 0 128.39 24.34 92.63 56.64 52.38 60.25 42.97 26.74 19.39 18.51 5.37 12.30 6.66 16.48 25.47 52.04 4.30 18.36 26.73 20.45 28.48 22.53 11.95 67 E2j_E2j KnownJunction 1 560.17 278.50 1656.24 605.45 453.31 486.99 465.12 490.10 254.95 449.86 339.61 312.70 97.07 594.09 973.49 497.22 498.27 584.20 578.18 501.11 764.62 597.95 548.97 68 ER2r ExonRegion 0 73.01 19.38 86.90 50.49 42.06 53.84 50.50 36.47 16.46 34.21 12.18 10.70 6.32 24.54 40.88 29.55 19.36 26.51 22.01 20.89 22.63 14.42 20.06 69 E2_Aj KnownBoundary 0 31.04 19.86 46.66 42.75 55.86 76.60 36.92 18.77 14.38 26.24 12.79 0.00 6.66 16.83 41.78 8.54 15.90 16.62 22.02 2.43 8.71 0.00 10.93 70 ER2s ExonRegion 0 370.67 251.72 1457.84 532.29 446.97 494.59 501.65 509.18 267.03 480.15 301.68 229.69 144.40 562.50 800.29 393.39 428.74 650.68 393.48 554.57 714.60 429.90 401.47 71 E2_Dk KnownBoundary 0 36.45 0.00 30.87 20.51 4.24 13.06 15.02 9.00 7.75 5.75 11.53 0.00 13.64 6.59 6.30 16.41 4.49 15.42 9.60 2.88 9.02 14.14 7.51 72 E2k_E2k KnownJunction 0 337.02 311.33 1618.30 515.95 603.57 573.02 688.72 515.36 336.45 501.86 287.44 174.66 122.72 529.23 845.17 462.70 519.87 696.46 360.29 581.33 748.25 480.38 409.40 73 ER2t ExonRegion 0 20.70 10.00 36.82 16.39 16.21 12.47 20.52 11.42 8.40 11.55 9.28 7.85 5.89 15.66 17.10 8.95 18.35 16.24 5.89 9.15 20.17 10.71 14.34 74 E2_Dl NovelBoundary 0 168.84 128.73 667.30 267.73 247.37 193.70 275.18 270.64 178.56 261.47 152.25 52.22 13.80 225.79 340.07 193.45 210.10 217.63 137.42 249.79 360.10 182.29 143.32 75 ER2u ExonRegion 0 242.34 255.42 1350.36 468.56 476.55 472.57 537.00 473.94 302.60 463.23 288.00 177.94 116.31 542.62 815.83 425.31 453.54 584.26 317.90 524.68 770.86 414.00 360.03 76 ER2v ExonRegion 0 201.36 221.38 1305.60 521.01 334.11 350.41 389.90 522.67 279.32 500.63 291.80 169.07 89.43 497.53 869.05 352.42 394.99 470.68 325.45 502.02 698.76 388.49 291.87 77 E2_Dm NovelBoundary 1 225.89 223.97 1237.42 515.09 338.37 373.14 427.45 496.22 214.75 462.46 289.76 203.62 73.05 515.04 796.10 382.72 351.00 440.32 498.27 563.05 623.70 431.57 304.75 78 E2m_E3a KnownJunction 0 2.74 0.00 6.09 8.92 4.33 13.51 2.25 7.11 2.55 2.79 2.68 6.30 6.82 9.77 9.39 0.00 8.32 0.00 22.02 8.56 5.93 10.53 4.01 79 E2n_E3a KnownJunction 0 327.17 238.97 1455.15 599.66 552.80 508.68 626.05 570.81 249.16 508.79 291.49 293.95 132.46 567.78 991.78 430.23 341.75 658.32 474.65 573.66 707.78 569.84 383.88 80 ER2w ExonRegion 0 223.25 206.36 1358.35 548.47 391.47 425.28 483.59 533.72 241.81 500.35 301.36 235.11 117.86 573.38 907.97 394.78 345.88 531.11 458.00 558.18 692.54 505.75 336.82 81 ER3a ExonRegion 0 275.37 197.40 1366.80 531.76 467.61 443.72 535.20 517.05 253.41 471.73 294.53 243.50 132.45 617.17 894.09 381.97 413.98 597.27 409.48 555.10 718.03 505.65 369.92 82 ER3b ExonRegion 0 335.09 227.79 1283.68 494.78 485.91 470.70 485.67 518.25 271.09 443.01 321.18 160.49 123.96 545.55 808.68 354.67 451.76 554.74 331.10 509.72 728.69 404.84 352.89 83 E3b_E4a KnownJunction 0 349.47 281.00 1329.85 594.60 404.24 547.01 457.35 482.37 275.63 450.66 289.49 307.75 189.11 505.33 858.03 390.15 337.17 572.18 315.77 483.60 646.01 304.82 299.62 84 ER4a ExonRegion 0 357.80 214.70 1200.85 504.23 247.45 309.55 299.44 462.85 230.57 394.65 212.88 233.07 121.39 506.18 767.21 408.52 336.08 436.90 425.56 379.77 538.42 429.90 341.69 85 E4_Da KnownBoundary 0 335.76 242.92 1097.98 397.05 211.29 421.18 298.54 458.63 247.42 377.84 140.93 128.59 74.35 469.25 674.95 236.26 351.75 244.20 322.36 421.98 528.38 497.22 187.29 86 ER4b ExonRegion 1 200.96 129.36 627.55 242.63 224.47 275.06 250.38 249.67 136.18 220.12 107.97 178.71 135.07 284.17 411.02 212.94 247.55 159.73 216.50 170.71 332.96 202.76 164.64 87 E4_Db KnownBoundary 0 31.56 8.88 117.71 41.85 41.43 39.01 25.70 48.80 38.63 57.54 28.27 49.97 5.84 29.73 46.23 30.68 21.41 42.45 34.07 20.33 53.19 70.36 35.34 88 E4_Dc KnownBoundary 0 69.64 31.38 122.20 47.45 78.78 42.59 59.58 73.56 29.17 71.43 32.27 49.22 33.76 31.67 25.96 82.63 83.68 59.11 52.05 39.63 40.28 56.33 40.46 89 ER4c ExonRegion 1 156.62 59.99 417.24 139.70 128.44 94.44 117.17 159.88 96.96 162.29 81.18 140.71 75.04 152.67 310.43 203.59 176.60 136.73 191.12 88.30 167.48 163.56 164.45 90 ER4d ExonRegion 0 107.92 38.03 214.95 78.40 60.42 79.63 75.19 91.76 51.89 96.38 37.31 54.88 31.42 79.04 168.95 107.52 102.59 69.06 78.09 66.94 86.33 84.86 71.25 91 IG4 Intergenic 0 8.70 18.19 22.07 25.04 35.57 25.49 20.32 37.03 8.23 24.16 11.21 23.39 7.57 7.48 10.54 7.18 7.58 17.76 15.01 13.63 4.79 6.55 6.39 92 IG4_AR1 ActiveIntergenicRegion 0 0.00 2.03 0.00 5.45 4.46 14.67 5.52 5.47 1.24 4.97 0.00 18.04 0.00 8.12 5.80 5.94 0.00 1.85 3.19 8.51 0.00 4.17 0.00 93 IG4_SR2 SilentIntergenicRegion 0 9.34 19.46 23.69 26.63 38.13 26.79 21.53 39.59 8.80 25.78 12.04 24.32 8.13 7.68 11.11 7.50 8.14 19.01 16.01 14.36 5.15 6.84 6.86