Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	TSC22D4	Gene	0	62.21	9.86	83.90	25.35	29.72	37.18	26.23	43.28	29.99	51.36	164.95	27.50	43.15	167.01	174.44	158.51	120.36	42.11	45.13	19.77	161.92	69.37	57.41
2	300181	Transcript	0	0.42	0.93	3.31	2.83	1.84	4.05	1.97	2.77	1.07	1.65	6.93	0.00	2.39	11.08	13.33	6.47	4.26	2.71	3.65	2.15	1.38	2.26	4.04
3	393991	Transcript	0	3.78	0.00	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.79	0.00	0.00	26.37	25.59	10.94	17.48	3.94	4.42	0.00	8.53	0.00	3.84
4	493217	Transcript	0	26.55	6.39	31.45	15.66	30.54	14.85	16.26	11.01	9.07	8.65	24.39	10.00	17.22	29.99	39.42	48.67	21.44	8.23	14.82	6.67	22.85	6.01	11.21
5	496728	Transcript	0	0.00	0.16	2.14	0.00	0.73	1.38	0.36	0.10	0.45	0.22	0.93	0.73	0.00	0.72	0.08	0.39	0.13	0.00	0.30	0.38	0.99	0.81	0.46
6	456330	Transcript	0	9.74	0.64	6.67	1.68	4.06	2.51	3.40	1.65	0.42	0.62	9.86	0.35	2.10	12.22	15.29	11.95	8.41	3.26	2.03	2.20	7.80	2.42	4.78
7	423266	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.31	1.86	5.39	4.63	2.34	6.27	2.62	3.82	1.83	1.00	6.12	0.00	0.10	15.67	17.95	12.94	1.10	5.43	7.30	1.64	0.55	3.99	5.14
9	E1_Ab	KnownBoundary	0	0.00	8.55	10.64	13.75	3.48	7.33	8.21	10.39	4.92	2.69	12.53	0.00	0.00	29.25	41.41	47.42	7.95	13.22	18.45	2.94	2.41	8.88	9.90
10	ER1b	ExonRegion	1	105.93	18.56	55.18	26.37	121.81	163.50	71.16	36.54	25.06	41.02	237.96	0.00	10.12	201.65	217.82	258.06	189.36	74.20	107.04	23.34	239.96	116.21	147.34
11	E1_Ac	KnownBoundary	1	401.03	30.98	132.99	53.97	316.47	270.07	163.09	78.62	68.78	104.98	615.58	0.00	12.66	517.16	537.74	608.39	471.62	165.40	267.96	58.42	641.74	333.91	345.81
12	ER1c	ExonRegion	0	48.80	9.25	109.88	26.39	42.89	65.65	44.03	61.85	44.83	90.58	332.19	38.68	53.52	293.52	280.10	344.30	259.73	79.83	101.98	33.30	354.73	140.33	142.24
13	E1_Da	NovelBoundary	0	71.64	0.00	10.14	5.13	0.00	44.12	28.00	2.34	6.48	1.58	29.53	0.00	6.01	37.91	79.49	30.33	23.09	0.00	7.44	0.00	27.31	5.76	3.76
14	E1a_E2a	KnownJunction	0	31.71	33.09	134.50	29.70	27.25	68.77	62.76	68.96	41.32	97.11	183.73	42.01	72.88	181.18	176.03	143.55	115.47	61.39	70.03	26.46	168.65	59.15	55.83
15	E1a_E2c	KnownJunction	0	3.78	0.00	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.79	0.00	0.00	26.37	25.59	10.94	17.48	3.94	4.42	0.00	8.53	0.00	3.84
16	E1a_E3a	NovelJunction	0	2.74	0.00	4.02	0.00	4.33	2.44	9.41	5.05	3.21	2.85	4.90	0.00	0.00	0.00	8.90	4.27	8.23	1.82	0.00	0.00	17.17	5.76	8.19
17	I1	Intron	0	19.95	0.53	12.02	4.20	6.91	6.39	7.69	12.30	9.27	13.46	50.92	28.64	68.50	70.60	72.36	80.20	60.95	5.22	14.81	3.30	44.65	18.83	13.27
18	I1_AR1	ActiveIntronRegion	0	19.95	0.73	12.32	4.13	7.41	5.53	7.64	11.64	9.77	13.60	53.34	20.99	48.20	66.59	72.03	85.55	60.29	5.48	15.67	3.82	45.71	20.37	12.74
19	I1_AR2	ActiveIntronRegion	1	22.96	0.00	16.57	6.54	9.02	10.72	8.08	20.89	9.80	18.06	62.77	50.41	128.22	94.67	86.00	84.93	84.48	7.99	16.30	2.27	55.24	20.34	15.58
20	I1_SR1	SilentIntronRegion	0	17.41	0.00	5.18	1.86	1.69	6.29	7.97	6.10	6.10	7.54	24.50	47.54	116.29	67.12	60.39	47.19	38.53	0.41	8.45	1.69	27.43	8.80	14.14
21	E2_Aa	NovelBoundary	1	9.93	6.58	9.79	4.13	4.33	10.73	10.86	3.78	1.33	6.77	44.43	55.07	126.78	62.92	32.63	43.66	27.21	1.78	8.00	0.00	11.24	0.00	8.45
22	ER2a	ExonRegion	0	48.30	7.55	94.89	22.32	15.01	36.44	18.86	49.05	33.60	69.75	215.03	55.41	100.85	231.12	205.91	181.02	154.40	51.64	54.10	24.30	223.45	79.43	56.00
23	E2_Ab	KnownBoundary	0	148.77	33.35	169.04	54.47	81.75	121.75	66.91	85.11	60.18	111.50	383.04	43.06	89.60	353.29	383.21	420.06	269.85	122.33	123.02	55.42	380.80	157.55	122.15
24	ER2b	ExonRegion	0	96.23	16.13	135.13	32.20	53.51	78.00	61.86	67.61	46.65	82.15	282.47	36.15	89.66	318.40	314.21	329.84	213.33	82.50	73.78	38.10	299.81	137.71	89.40
25	E2_Ac	KnownBoundary	0	105.87	20.39	112.39	30.80	43.89	85.80	74.72	64.94	49.74	63.02	216.69	29.56	70.29	324.98	312.88	278.99	161.76	62.88	105.51	40.20	251.62	107.10	97.06
26	ER2c	ExonRegion	0	120.29	16.00	157.43	43.17	41.69	73.51	50.80	76.54	62.92	87.69	309.72	34.99	55.71	347.63	342.70	272.01	210.46	71.05	78.32	35.36	288.37	116.44	102.72
27	E2a_E3a	KnownJunction	0	223.30	23.81	263.03	59.23	36.50	62.46	64.48	106.34	94.76	117.95	457.64	36.61	58.44	405.50	411.89	420.74	309.49	104.84	102.50	33.94	349.35	200.97	159.03
28	I2	Intron	0	17.18	2.98	9.35	9.06	7.83	4.67	7.84	5.35	4.91	7.06	12.96	7.78	10.78	11.08	16.81	24.06	15.19	4.31	6.77	4.27	12.89	4.13	5.40
29	I2_AR1	ActiveIntronRegion	0	15.39	3.17	9.17	7.16	7.81	3.39	9.95	4.62	6.11	5.36	10.38	7.36	11.40	9.64	13.06	29.86	17.36	4.25	9.51	4.61	17.22	4.87	6.83
30	I2_SR2	SilentIntronRegion	0	18.57	3.06	9.91	10.05	8.25	5.26	7.54	5.82	4.78	7.92	14.35	7.72	11.10	11.94	18.31	23.39	15.20	4.54	6.16	4.38	12.25	4.09	5.30
31	E3_Aa	NovelBoundary	0	91.57	14.93	36.60	19.78	20.20	5.22	22.35	14.87	3.12	13.24	12.21	6.30	20.29	7.24	39.06	36.83	22.16	7.01	0.00	9.52	47.94	2.39	4.01
32	ER3a	ExonRegion	0	222.18	30.75	230.14	83.00	80.74	89.65	78.39	116.43	98.38	134.69	449.23	59.16	69.82	412.63	448.34	380.49	310.76	100.61	100.69	58.27	397.38	169.44	154.04
33	E3_Da	KnownBoundary	0	23.49	2.57	23.15	14.92	44.23	10.85	24.07	6.57	5.09	8.84	12.11	12.60	27.11	7.42	17.68	19.99	21.04	9.00	3.76	9.65	8.34	3.12	4.35
34	E3a_E5a	KnownJunction	0	315.17	26.57	209.63	80.08	88.96	105.00	103.43	146.43	97.25	118.97	333.19	30.31	39.77	292.78	389.02	353.07	334.83	81.95	104.29	40.20	379.13	170.72	169.02
35	ER3b	ExonRegion	0	26.55	6.39	31.45	15.66	30.54	14.85	16.26	11.01	9.07	8.65	24.39	10.00	17.22	29.99	39.42	48.67	21.44	8.23	14.82	6.67	22.85	6.01	11.21
36	I3	Intron	0	29.24	4.29	26.13	9.87	16.25	10.68	10.31	12.13	10.04	12.22	24.94	12.98	13.35	23.40	34.76	47.03	24.73	10.08	8.68	7.65	21.15	8.64	10.07
37	I3_SR1	SilentIntronRegion	0	29.24	4.29	26.14	9.88	16.26	10.69	10.31	12.14	10.04	12.22	24.95	12.98	13.35	23.40	34.77	47.05	24.74	10.08	8.69	7.65	21.15	8.64	10.07
38	E4_Aa	NovelBoundary	0	38.15	3.29	16.97	6.53	10.36	5.79	4.28	7.76	2.89	5.88	17.27	0.00	0.00	4.24	0.00	20.34	20.38	11.15	4.24	0.00	25.02	10.47	0.00
39	E4_Ab	NovelBoundary	0	32.89	3.03	15.40	5.19	15.62	7.95	3.93	6.57	2.40	7.87	10.00	6.00	0.00	10.77	31.03	56.14	12.25	4.15	11.86	8.25	13.96	8.51	3.50
40	ER4a	ExonRegion	0	3.33	0.00	0.00	1.17	0.00	0.00	0.76	0.00	0.00	0.00	3.87	0.00	0.00	3.71	8.29	0.00	2.36	0.00	0.00	0.00	0.31	0.00	4.61
41	ER4b	ExonRegion	0	39.41	5.30	29.06	13.27	15.65	13.75	7.75	9.85	8.26	13.94	25.28	4.48	7.04	25.76	29.32	31.93	20.64	8.05	4.37	5.26	18.65	8.23	8.77
42	E4_Da	NovelBoundary	0	41.56	6.31	46.95	18.35	28.01	39.47	7.99	9.41	15.34	15.85	22.01	6.30	0.00	38.50	13.35	40.59	8.60	22.63	4.14	6.20	25.70	11.94	11.44
43	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	I4	Intron	0	34.45	6.62	13.87	4.41	11.61	10.94	6.46	5.59	0.00	4.64	22.02	13.54	10.18	20.42	32.13	40.31	12.54	7.00	8.64	5.77	8.37	5.65	11.15
45	I4_AR1	ActiveIntronRegion	0	35.20	6.76	14.16	4.49	11.87	11.18	6.61	5.71	0.00	4.72	22.48	13.84	10.40	20.85	32.77	41.13	12.81	7.13	8.83	5.90	8.55	5.77	11.40
46	E5_Aa	NovelBoundary	0	68.75	13.88	66.91	23.61	46.43	42.76	20.40	23.62	26.10	27.08	41.06	11.70	12.99	29.02	69.23	54.77	25.99	22.68	8.00	14.57	38.43	16.29	21.43
47	ER5a	ExonRegion	0	210.87	30.88	217.29	73.93	86.06	82.37	81.49	120.64	91.95	121.34	421.02	78.90	63.94	360.92	433.17	373.46	294.59	89.79	102.91	45.38	389.16	189.86	168.05
48	E5_Da	NovelBoundary	0	49.71	0.00	75.72	24.97	20.80	20.56	21.51	39.64	22.48	38.52	64.44	18.91	32.79	33.43	79.98	79.12	34.69	30.68	39.25	13.29	20.02	8.63	9.90
49	E5a_E6a	KnownJunction	0	6.82	0.00	11.50	2.06	3.23	0.00	0.00	2.55	0.00	0.00	2.11	0.00	0.00	4.89	0.00	4.36	0.00	5.84	0.00	0.00	5.75	0.00	4.18
50	E5a_E6b	KnownJunction	1	216.78	43.35	224.83	79.51	115.79	61.78	65.01	83.87	89.35	120.58	465.59	67.52	46.91	346.64	421.78	362.38	289.76	97.58	97.41	50.43	338.17	190.31	162.53
51	E5a_E7a	KnownJunction	0	0.00	0.00	3.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.72	2.33	0.00
52	I5	Intron	0	52.82	3.97	42.00	13.66	13.94	11.14	9.48	23.48	10.39	15.95	41.53	13.98	14.73	32.68	46.70	60.62	28.65	17.34	18.66	8.77	23.43	10.40	12.11
53	I5_AR1	ActiveIntronRegion	0	62.94	4.74	50.10	16.30	16.62	13.27	11.31	28.00	12.39	19.02	49.52	16.68	17.57	38.98	52.97	72.31	34.18	20.68	22.27	10.47	27.94	12.41	14.44
54	E6_Aa	NovelBoundary	0	31.04	3.35	81.93	15.75	7.22	10.45	10.47	35.45	18.58	18.08	12.27	25.21	26.13	24.49	19.41	34.86	31.98	16.95	25.79	12.02	39.41	0.00	8.02
55	ER6a	ExonRegion	0	19.08	1.92	8.51	1.81	8.94	7.52	9.44	2.40	1.25	1.87	23.61	1.05	6.30	28.05	37.59	31.50	22.87	3.93	6.10	6.60	17.35	7.26	5.54
56	E6_Ab	NovelBoundary	0	46.16	0.00	35.19	7.89	19.69	11.30	19.52	7.64	5.90	8.27	11.53	0.00	0.00	6.95	6.18	31.36	4.39	8.75	4.42	0.00	23.10	5.76	4.35
57	E6_Da	NovelBoundary	0	13.19	3.35	22.09	7.89	0.00	6.93	2.21	6.74	13.98	5.56	7.37	0.00	6.82	9.54	0.00	21.19	4.77	6.72	4.05	0.00	5.50	0.00	0.00
58	ER6b	ExonRegion	0	189.43	32.54	241.40	70.87	104.35	66.93	65.54	97.66	86.46	133.61	461.96	77.93	56.28	350.81	423.58	338.82	269.02	96.08	101.93	40.43	359.20	185.43	162.98
59	ER6c	ExonRegion	0	102.24	15.93	124.84	39.28	38.66	36.89	31.78	69.58	37.24	63.59	176.61	21.85	28.25	189.48	248.46	179.15	125.43	55.38	47.44	22.08	162.59	98.04	61.46
60	E6_Db	NovelBoundary	0	23.63	8.75	25.78	10.49	27.50	34.18	22.17	21.81	10.30	20.01	48.96	17.11	44.96	81.64	86.28	39.99	43.67	2.57	8.47	9.20	30.15	29.64	11.44
61	ER6d	ExonRegion	0	5.93	2.85	7.60	8.27	3.57	6.60	5.83	9.45	2.88	6.73	25.51	2.31	11.88	37.79	40.04	9.31	13.64	0.00	0.00	4.26	14.40	9.58	6.07
62	ER6e	ExonRegion	0	0.53	0.00	1.23	1.02	1.34	1.83	1.32	1.73	0.31	2.29	7.73	0.00	4.69	6.50	8.70	0.00	7.43	0.00	0.00	2.66	2.20	0.52	2.94
63	ER7a	ExonRegion	0	0.00	0.00	2.49	0.00	0.00	1.20	0.00	0.00	1.24	0.39	1.10	0.58	0.00	1.43	0.00	0.80	0.00	0.00	0.90	1.49	1.25	0.28	0.00
64	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	ER8a	ExonRegion	0	0.00	0.63	2.39	0.00	2.91	4.32	1.44	0.40	0.58	0.47	0.30	2.34	0.00	1.44	0.32	0.76	0.51	0.00	0.31	0.03	0.00	0.64	1.83