Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ALKBH4 Gene 0 19.10 32.30 57.08 30.82 26.68 31.68 22.76 40.62 28.62 49.92 40.07 10.46 9.42 40.97 49.97 33.17 27.52 36.50 28.10 26.14 25.57 11.49 16.13 2 292566 Transcript 0 7.93 13.75 6.24 5.55 8.91 7.48 7.29 9.00 4.40 7.41 6.25 3.07 2.20 3.61 10.50 5.11 3.53 3.17 3.37 3.30 3.68 2.17 1.52 3 490528 Transcript 0 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 1.30 2.71 4.79 0.00 6.17 0.00 5.93 0.00 0.00 1.78 0.00 3.00 0.00 0.00 0.00 4 498283 Transcript 0 4.52 0.35 12.59 2.16 3.96 4.35 2.84 5.50 3.42 7.01 1.57 0.00 0.00 2.87 4.81 2.93 1.63 7.49 3.14 4.99 1.09 0.00 2.17 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 4.59 4.85 2.55 1.23 0.26 0.00 4.14 0.00 0.00 0.23 7.46 0.00 0.47 0.00 0.00 0.00 3.31 0.00 0.00 6 ER1b ExonRegion 1 0.00 0.00 0.82 0.00 6.24 9.78 3.31 1.73 2.47 0.00 6.77 0.00 0.00 1.62 12.09 0.00 4.40 0.00 0.00 0.00 6.61 0.69 0.98 7 ER1c ExonRegion 0 6.79 7.98 21.80 5.56 5.03 27.20 12.83 11.59 21.02 20.46 17.23 1.15 1.31 10.06 20.49 12.28 20.45 7.57 10.16 4.75 16.06 6.25 4.15 8 E1_Da NovelBoundary 0 3.33 0.00 14.25 1.60 4.33 2.90 3.93 27.19 24.25 13.65 0.00 0.00 0.00 4.94 0.00 0.00 4.39 4.27 0.00 0.00 3.15 0.00 0.00 9 E1a_E2a KnownJunction 0 0.00 0.00 22.38 9.12 0.00 13.12 0.00 10.76 7.75 24.39 57.12 0.00 0.00 14.30 8.90 8.12 27.68 13.27 0.00 8.76 25.51 4.90 0.00 10 E1a_E2b KnownJunction 0 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 1.30 2.71 4.79 0.00 6.17 0.00 5.93 0.00 0.00 1.78 0.00 3.00 0.00 0.00 0.00 11 E2_Aa NovelBoundary 0 6.96 8.62 11.80 16.81 13.50 4.60 4.02 14.91 7.52 19.88 0.00 5.40 0.00 2.24 6.06 7.18 4.77 4.73 4.80 5.24 2.90 3.12 4.27 12 ER2a ExonRegion 0 16.45 8.09 74.33 24.22 31.29 14.37 9.66 42.14 38.96 56.67 48.20 13.13 1.94 46.45 52.44 39.87 45.03 41.49 38.05 26.48 37.46 17.80 17.52 13 E2_Ab KnownBoundary 0 39.64 12.43 99.85 47.01 35.82 18.46 25.00 98.78 76.65 85.26 24.74 12.90 0.00 53.98 84.31 64.77 25.25 87.47 65.23 59.83 31.20 13.10 32.61 14 ER2b ExonRegion 0 13.62 10.11 90.57 49.57 37.84 56.54 26.47 69.84 55.24 73.54 53.70 16.46 2.12 48.49 58.22 36.37 40.39 95.12 24.85 40.33 38.11 8.31 15.43 15 E2_Da KnownBoundary 0 6.89 6.45 8.78 7.66 0.00 8.46 6.40 2.46 3.10 4.00 7.05 0.00 0.00 0.00 4.45 0.00 0.00 6.88 0.00 3.26 0.00 0.00 0.00 16 E2a_E3a KnownJunction 0 9.56 9.14 90.03 44.58 36.50 100.17 63.46 46.04 24.74 60.31 60.02 13.95 0.00 61.22 59.34 36.74 49.93 63.05 26.45 34.71 55.60 11.76 12.80 17 ER2c ExonRegion 0 4.52 0.35 12.59 2.16 3.96 4.35 2.84 5.50 3.42 7.01 1.57 0.00 0.00 2.87 4.81 2.93 1.63 7.49 3.14 4.99 1.09 0.00 2.17 18 E2_Db NovelBoundary 0 6.74 6.51 19.34 3.83 3.99 2.56 7.60 7.39 7.55 6.50 4.84 0.00 0.00 4.94 24.60 8.72 13.18 12.31 4.14 2.36 2.35 0.00 0.00 19 E3_Aa NovelBoundary 0 22.30 0.00 21.23 8.42 16.30 15.05 0.00 5.83 9.72 2.31 9.48 0.00 0.00 4.94 20.40 11.88 7.29 7.50 12.52 0.00 5.56 0.00 6.91 20 ER3a ExonRegion 0 26.00 48.13 89.16 48.71 39.44 47.89 34.21 60.82 41.74 77.69 65.03 15.16 16.18 68.91 80.44 52.90 41.80 55.81 45.92 41.89 40.60 17.91 27.16 21 E3_Da KnownBoundary 0 48.38 46.11 60.08 62.83 138.29 83.30 82.72 45.18 41.58 79.14 50.54 43.06 13.15 41.62 100.87 44.95 26.09 24.42 53.18 39.18 14.95 13.78 29.71 22 ER3b ExonRegion 0 15.86 27.49 12.49 11.10 13.24 10.12 12.02 16.77 8.54 14.83 8.35 6.13 4.41 6.99 13.55 10.21 6.59 6.34 6.74 6.61 4.05 4.34 3.04