Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MEPCE Gene 0 69.92 49.35 131.02 63.57 44.16 81.92 36.08 63.54 51.72 82.73 230.66 63.06 65.76 224.93 232.95 222.98 173.42 113.61 78.85 77.12 148.18 104.98 94.57 2 497759 Transcript 0 0.00 0.00 0.61 0.00 0.00 0.00 0.00 1.54 0.37 0.59 5.83 0.00 0.00 37.35 20.15 26.86 2.48 0.69 5.46 1.86 3.34 4.43 30.21 3 414441 Transcript 0 0.00 0.00 1.72 1.51 0.00 0.61 0.25 5.36 2.00 2.58 16.45 5.36 1.42 32.83 17.65 28.37 12.95 1.94 7.15 2.87 10.75 3.92 33.00 4 470297 Transcript 0 0.00 0.00 0.79 0.00 0.00 2.48 0.62 0.31 2.11 1.15 7.96 0.00 0.00 10.03 3.07 9.09 9.32 0.00 0.37 0.94 4.34 1.16 1.38 5 479201 Transcript 0 2.96 0.00 2.87 0.00 3.48 2.10 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 4.82 0.00 3.93 6.84 8.85 2.62 0.00 0.00 3.16 6 425355 Transcript 0 1.14 0.77 12.24 4.61 4.66 13.99 1.95 3.38 6.34 12.80 60.81 18.80 15.37 54.68 34.14 56.44 54.10 17.06 25.66 16.10 51.85 13.77 28.52 7 310512 Transcript 0 9.42 4.47 10.99 2.35 1.75 7.54 5.95 7.45 6.00 11.85 43.21 3.28 6.72 66.79 52.18 34.49 38.69 16.14 13.30 10.79 35.53 8.09 13.34 8 471065 Transcript 0 0.00 0.00 0.00 0.08 0.59 1.02 0.00 0.96 0.00 0.00 0.00 0.24 0.00 0.09 0.16 0.83 3.30 0.10 0.18 0.00 0.00 0.00 0.00 9 ER1a ExonRegion 0 0.00 0.00 1.23 0.00 0.00 0.00 0.00 3.09 0.75 1.19 11.67 0.00 0.00 74.71 40.31 53.71 4.95 1.39 10.92 3.72 6.69 8.85 60.41 10 ER1b ExonRegion 0 0.00 0.14 1.77 0.03 0.03 0.29 0.00 6.34 3.23 1.63 23.26 0.20 0.00 49.76 27.83 57.04 21.87 1.18 11.29 7.28 17.20 8.12 62.64 11 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 5.11 0.00 0.00 1.79 0.00 22.48 0.00 6.82 10.18 0.00 4.10 15.52 2.03 0.00 2.49 19.03 0.00 0.00 12 E1a_E2g KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER1c ExonRegion 0 0.00 0.00 3.45 3.03 0.00 1.22 0.49 10.73 4.00 5.17 30.80 10.71 2.85 65.65 35.31 56.73 25.89 3.89 14.30 5.74 21.50 7.84 66.00 14 E1_Db NovelBoundary 1 3.56 0.00 13.72 12.49 8.40 8.40 8.52 19.80 30.44 14.69 99.66 46.52 44.96 60.69 77.63 211.57 68.82 20.69 27.11 12.14 46.46 12.06 99.70 15 E1b_E2f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I1 Intron 0 2.04 1.63 4.39 3.26 6.87 8.23 2.55 6.20 8.56 4.11 49.91 21.03 18.76 56.95 40.56 65.77 40.76 3.82 8.17 7.85 37.46 17.38 16.01 17 I1_AR1 ActiveIntronRegion 0 2.05 1.64 4.42 3.28 6.90 8.28 2.56 6.24 8.61 4.14 50.20 21.17 18.86 57.30 40.81 66.16 41.01 3.85 8.23 7.89 37.69 17.49 16.11 18 E2_Aa NovelBoundary 1 13.85 0.00 14.22 5.29 4.33 17.09 4.42 8.67 7.20 5.32 39.06 25.06 6.49 105.36 66.01 91.51 27.02 8.71 22.12 12.40 28.97 17.45 27.57 19 E2_Ab NovelBoundary 0 3.78 3.35 6.09 3.53 4.16 17.66 8.21 7.27 12.90 7.52 72.65 0.00 13.64 43.68 24.11 46.14 70.31 8.83 9.60 9.01 40.28 7.96 3.33 20 ER2a ExonRegion 0 0.00 0.00 1.59 0.00 0.00 4.96 1.25 0.61 4.21 2.29 15.92 0.00 0.00 20.06 6.14 18.18 18.64 0.00 0.75 1.88 8.69 2.33 2.76 21 ER2b ExonRegion 1 3.28 1.50 11.05 1.90 9.46 46.93 13.45 6.44 12.32 7.76 154.63 15.87 28.89 81.11 37.04 88.95 123.90 18.34 40.30 16.56 67.36 12.92 32.94 22 E2_Ac KnownBoundary 0 23.19 5.99 18.80 5.53 24.11 66.84 26.50 7.72 11.95 15.20 143.14 31.36 38.31 95.30 62.80 165.60 93.60 39.75 43.67 36.75 78.02 14.39 76.40 23 ER2c ExonRegion 1 13.80 5.54 14.88 5.81 19.39 57.09 19.17 8.07 11.71 18.43 143.20 19.64 38.74 224.67 81.57 229.03 104.62 46.65 47.36 28.28 112.04 38.08 104.36 24 E2_Da KnownBoundary 0 0.00 5.33 15.05 12.62 10.78 15.73 7.11 13.97 17.13 24.52 110.29 13.05 39.28 71.93 67.74 148.00 101.64 46.34 10.92 26.53 78.58 33.49 41.74 25 E2a_E2g KnownJunction 0 2.96 0.00 2.87 0.00 3.48 2.10 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 4.82 0.00 3.93 6.84 8.85 2.62 0.00 0.00 3.16 26 ER2d ExonRegion 0 3.17 3.43 19.15 8.39 10.54 18.83 5.19 7.26 16.08 24.89 204.95 33.42 66.17 122.34 76.66 133.56 153.34 37.73 27.77 20.88 93.07 29.92 51.16 27 E2_Db KnownBoundary 0 3.04 2.70 18.39 4.99 8.40 15.79 3.71 2.01 12.88 25.73 118.87 30.31 39.28 79.82 53.53 117.15 81.63 32.96 57.51 25.18 89.95 31.05 53.95 28 E2b_E2g KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER2e ExonRegion 0 2.27 1.54 24.48 9.21 9.32 27.98 3.90 6.75 12.67 25.59 121.63 37.60 30.75 109.36 68.29 112.89 108.20 34.11 51.32 32.19 103.70 27.55 57.05 30 E2_Ad KnownBoundary 1 6.74 3.35 38.08 15.25 24.36 65.02 12.23 11.01 16.55 30.38 158.04 43.06 12.01 94.77 109.03 159.19 132.68 51.07 56.47 34.52 126.09 46.66 67.44 31 ER2f ExonRegion 0 5.05 10.26 36.63 12.65 11.45 43.82 10.88 13.33 13.67 25.91 110.63 16.20 29.31 153.76 96.87 102.95 88.10 40.73 34.77 31.29 74.07 48.98 50.17 32 E2_Dc KnownBoundary 0 0.00 5.72 17.50 8.99 0.00 12.38 0.00 15.73 13.19 29.31 63.75 6.15 20.62 101.24 89.87 59.39 47.31 49.45 12.89 30.17 41.39 22.29 19.29 33 E2c_E2e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER2g ExonRegion 0 10.36 6.91 14.63 1.98 0.83 13.24 11.90 13.17 10.77 20.26 72.88 6.56 13.45 127.09 98.56 60.05 74.08 30.43 26.61 21.59 66.66 16.18 23.75 35 E2_Ae KnownBoundary 1 5.85 6.12 16.14 5.29 7.81 23.57 19.25 12.03 7.96 15.90 84.39 6.15 0.00 116.96 48.71 39.99 78.63 27.90 16.09 11.38 60.17 10.96 41.15 36 ER2h ExonRegion 0 16.58 19.62 42.67 20.34 12.66 45.98 14.82 19.60 19.93 42.71 127.81 39.25 33.90 144.33 134.29 107.95 115.53 49.85 47.34 40.29 100.93 50.49 49.07 37 E2_Af KnownBoundary 0 38.15 29.01 158.18 79.24 45.76 128.90 45.93 55.53 42.19 107.80 320.34 106.23 90.09 283.36 335.25 238.06 326.51 101.81 94.97 87.25 185.83 113.22 82.12 38 ER2i ExonRegion 0 41.89 36.74 143.39 67.57 32.00 84.48 30.97 66.62 55.36 104.59 283.95 71.15 73.44 269.93 280.96 250.11 224.48 150.18 114.63 104.30 176.35 125.84 107.72 39 E2_Ag KnownBoundary 0 72.01 67.62 176.90 115.20 76.06 77.74 38.82 98.25 78.56 129.90 246.01 99.03 68.66 311.09 390.38 307.70 221.22 216.26 204.81 111.02 177.49 174.64 142.56 40 ER2j ExonRegion 0 73.00 71.62 181.30 68.72 58.18 104.06 50.78 85.04 72.99 120.25 290.37 84.02 78.89 282.58 273.56 291.89 214.85 162.60 90.26 98.22 198.61 133.53 97.61 41 E2_Dd KnownBoundary 0 97.28 70.58 172.79 85.47 44.31 91.65 54.85 123.67 83.25 104.87 307.08 49.07 98.86 260.35 305.46 380.75 217.02 265.01 94.31 117.48 168.84 179.48 124.29 42 ER2k ExonRegion 0 116.06 88.43 231.05 82.65 66.41 135.82 72.00 104.11 85.76 119.13 337.12 45.02 64.52 248.49 356.63 355.40 235.21 223.89 111.45 114.02 223.20 177.15 100.49 43 E2_De KnownBoundary 0 167.21 116.56 244.31 118.50 65.79 132.93 103.74 84.57 89.24 146.02 280.65 42.46 60.22 253.75 423.02 370.07 254.89 190.98 178.17 123.10 196.20 223.93 148.19 44 ER2l ExonRegion 0 109.97 84.28 181.81 82.52 60.58 127.53 62.02 72.58 74.92 114.68 255.94 63.02 64.11 263.64 320.81 270.71 209.52 141.32 83.90 91.71 221.60 150.81 88.25 45 E2_Df KnownBoundary 0 100.61 83.74 186.33 102.62 76.57 186.48 89.39 128.73 87.27 131.76 332.40 67.37 72.72 273.65 324.37 331.11 194.39 171.24 78.78 101.63 268.55 198.40 93.73 46 ER2m ExonRegion 0 124.28 108.33 188.82 84.11 62.44 170.81 60.79 103.66 85.08 151.33 334.30 107.72 103.69 316.97 405.49 379.14 263.05 219.43 121.22 137.50 245.65 158.33 118.27 47 E2g_E3a KnownJunction 0 248.56 128.86 251.82 111.41 122.07 234.86 72.07 124.58 108.85 164.82 420.63 147.05 151.78 417.27 499.78 451.51 269.85 242.83 199.63 193.61 335.39 183.09 159.71 48 ER3a ExonRegion 0 180.81 91.48 273.61 145.17 121.52 184.01 92.11 134.08 123.76 162.65 444.62 128.65 127.37 368.68 435.52 486.41 319.29 248.05 149.71 186.87 297.47 205.94 190.92 49 E3_Ab KnownBoundary 0 173.44 107.48 305.13 169.08 134.04 186.09 111.64 141.17 112.88 195.96 384.99 151.70 178.56 329.80 352.43 550.11 262.08 233.22 142.59 140.04 236.55 187.01 184.38 50 ER3b ExonRegion 0 150.44 97.05 317.60 142.38 82.23 161.02 70.79 161.12 119.32 178.54 452.71 129.88 157.73 396.68 479.95 521.40 332.68 284.71 174.53 181.91 305.50 225.20 205.25 51 E3a_E4a KnownJunction 0 291.01 140.04 431.48 239.83 134.13 208.29 91.28 206.68 163.28 222.82 629.16 143.45 165.25 454.94 543.42 583.86 522.30 225.84 270.03 215.08 397.72 279.47 266.25 52 ER4a ExonRegion 0 148.84 111.48 308.89 164.46 112.11 198.25 75.27 152.00 122.33 167.11 439.12 172.77 142.58 377.51 419.70 436.83 316.89 222.20 118.96 137.36 289.24 220.59 186.84 53 E4a_E5a KnownJunction 1 259.53 162.67 440.55 180.56 173.17 249.29 149.05 204.55 124.45 213.04 592.68 90.93 219.79 355.70 400.15 633.59 433.10 378.10 224.29 185.68 366.53 348.36 253.53 54 E4b_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER4b ExonRegion 0 0.00 0.00 0.00 0.15 1.19 2.04 0.00 1.92 0.00 0.00 0.00 0.48 0.00 0.18 0.32 1.65 6.60 0.21 0.35 0.00 0.00 0.00 0.00 56 ER5a ExonRegion 0 255.68 124.89 270.27 146.79 153.14 156.02 90.82 147.01 98.68 148.44 424.07 139.57 138.69 394.69 451.02 387.90 284.85 219.55 144.39 125.19 230.75 217.21 176.03 57 E5_Ab KnownBoundary 0 229.23 151.55 326.63 177.73 138.29 126.29 96.32 165.28 110.07 139.79 344.88 97.53 100.64 352.17 455.41 329.06 245.16 184.05 98.83 159.98 246.06 146.90 173.20 58 ER5b ExonRegion 0 102.33 71.68 206.08 130.19 58.80 73.51 44.51 99.98 75.36 114.07 278.06 82.47 81.10 236.33 317.71 217.83 191.04 101.98 85.65 97.89 139.89 125.24 106.91 59 E5_Da KnownBoundary 0 326.95 97.88 211.08 142.94 42.87 86.83 37.85 75.54 54.11 69.20 93.50 61.52 81.65 179.35 272.95 157.82 118.00 106.91 125.65 60.02 87.72 65.03 70.94 60 ER5c ExonRegion 0 285.92 109.85 103.94 63.94 38.02 52.47 33.63 38.15 27.39 33.52 102.99 38.13 50.19 120.04 197.95 139.64 73.95 66.16 91.15 38.60 48.25 75.23 75.99 61 ER5d ExonRegion 0 8.47 2.03 7.35 2.73 2.68 1.83 0.00 1.73 1.24 3.44 13.53 0.00 0.00 6.50 5.80 8.92 3.30 1.85 0.00 0.00 4.41 0.00 2.94 62 IG12 Intergenic 0 7.24 7.95 18.96 6.20 11.28 5.49 10.67 6.76 4.05 5.53 9.92 10.05 0.81 4.46 7.03 5.81 8.06 9.54 7.39 9.36 5.11 2.80 18.83 63 IG12_SR1 SilentIntergenicRegion 0 2.83 4.55 20.16 4.63 4.40 3.88 8.09 4.98 4.93 7.28 8.77 8.13 0.00 2.14 6.89 3.32 6.82 7.71 4.79 8.79 2.59 3.53 18.16 64 IG12_AR2 ActiveIntergenicRegion 0 5.41 5.65 21.10 3.94 2.68 0.00 6.62 0.00 2.47 2.80 11.60 0.00 0.00 1.62 9.35 5.28 3.30 5.13 6.37 5.44 1.22 0.00 14.68 65 IG12_SR2 SilentIntergenicRegion 0 8.91 9.29 18.80 6.87 13.97 6.17 11.78 7.58 3.81 5.03 10.44 11.02 1.11 5.38 7.14 6.75 8.69 10.36 8.43 9.75 6.12 2.63 19.40