Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GIGYF1 Gene 0 81.26 93.67 186.66 155.59 110.46 180.86 88.79 133.55 119.40 123.44 99.61 34.05 41.26 130.61 96.02 113.20 97.17 165.20 111.09 71.29 120.29 101.38 128.37 2 275732 Transcript 0 81.16 78.56 248.64 210.72 100.93 211.99 96.02 175.16 169.53 165.06 117.30 37.32 50.35 158.13 122.19 141.52 113.67 233.93 127.41 92.69 147.83 120.81 160.27 3 471340 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 4 464111 Transcript 0 14.23 5.60 20.92 16.25 9.67 23.00 16.75 31.68 12.56 31.40 16.42 13.55 8.87 21.87 16.72 18.69 21.34 36.06 57.27 20.98 38.29 27.04 42.92 5 472105 Transcript 0 3.15 3.15 11.67 6.87 1.94 7.22 3.82 4.28 8.11 8.17 5.34 0.11 5.04 8.28 10.23 6.13 15.02 17.95 3.82 8.70 8.73 6.95 9.25 6 IG25_AR2 ActiveIntergenicRegion 0 13.75 4.46 14.48 11.37 12.85 16.33 19.67 8.85 5.81 8.72 5.41 9.04 5.89 8.88 12.76 15.00 13.93 17.40 13.58 8.38 9.56 7.40 9.76 7 IG25_SR1 SilentIntergenicRegion 0 11.30 4.93 22.14 11.96 8.71 12.46 14.28 11.39 4.73 9.80 8.78 6.40 5.59 9.60 14.95 13.69 12.64 15.54 14.96 10.56 12.15 7.05 10.38 8 IG25_AR1 ActiveIntergenicRegion 0 37.40 13.40 43.82 23.77 11.45 24.46 12.86 22.73 8.73 22.28 28.65 8.38 15.56 36.94 45.74 29.19 38.25 29.08 29.80 18.25 51.92 17.45 37.35 9 ER1a ExonRegion 0 38.81 33.55 111.06 91.68 58.99 110.35 49.65 97.51 92.44 81.81 73.45 33.35 41.54 86.20 58.60 76.37 68.33 143.01 115.28 54.59 90.60 78.26 102.58 10 E1_Ab KnownBoundary 0 10.15 15.39 66.17 58.43 27.50 96.76 28.71 56.27 49.39 56.73 47.91 12.30 21.26 85.47 49.82 56.31 63.96 78.93 118.40 12.02 85.31 53.21 47.29 11 ER1b ExonRegion 0 7.43 19.72 68.62 53.85 50.71 72.16 18.63 45.82 57.30 61.11 35.15 17.72 12.87 96.50 39.27 52.25 52.66 70.17 79.56 26.03 77.80 44.34 66.04 12 E1a_E2a KnownJunction 0 9.71 20.92 88.32 81.37 64.43 65.36 12.54 51.96 72.31 76.10 32.06 18.91 18.18 97.71 53.90 46.57 36.09 76.77 53.55 20.65 94.15 56.03 90.57 13 ER2a ExonRegion 0 23.14 15.22 86.78 71.88 45.80 102.79 51.05 64.38 74.30 72.16 59.27 15.62 13.28 97.10 40.68 60.72 80.41 110.20 69.49 47.33 102.91 51.88 72.17 14 E2a_E3a KnownJunction 1 37.49 20.59 143.05 139.84 78.18 180.01 74.77 87.61 99.65 96.33 100.45 29.71 0.00 142.21 56.12 92.37 122.95 158.97 121.23 76.44 115.71 95.52 117.72 15 ER3a ExonRegion 0 8.64 24.38 87.89 78.93 34.70 85.08 43.88 51.01 54.55 68.01 67.55 19.26 15.63 104.77 66.15 68.54 67.08 90.17 85.77 49.27 88.10 69.36 81.77 16 E3a_E4a KnownJunction 1 9.93 28.09 114.84 115.40 50.59 89.78 44.16 105.64 96.99 87.38 84.13 6.30 26.30 151.63 58.35 92.63 50.68 135.26 78.59 63.60 84.94 77.40 88.44 17 ER4a ExonRegion 1 8.35 20.26 94.81 98.94 37.27 73.29 28.94 80.33 77.88 77.27 59.94 13.84 4.90 106.02 58.00 46.97 84.56 99.32 56.34 59.63 81.58 65.37 75.17 18 E4a_E5a KnownJunction 0 23.49 41.44 111.23 106.01 57.98 85.92 39.39 83.09 112.27 79.70 48.49 0.00 6.82 67.40 56.37 62.97 62.27 144.22 70.68 61.68 68.39 85.11 77.68 19 ER5a ExonRegion 1 16.62 26.44 121.26 91.71 115.00 137.84 74.97 84.69 113.04 107.69 99.71 6.49 15.63 120.73 78.82 81.42 81.63 125.80 119.32 64.98 109.50 74.23 110.31 20 E5_Da KnownBoundary 1 29.71 30.52 162.15 112.51 261.21 266.04 144.24 110.32 132.70 135.68 120.03 12.60 33.93 172.11 80.47 134.49 103.13 204.74 189.93 89.68 136.10 78.38 147.51 21 E5a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 22 ER5b ExonRegion 0 15.89 14.87 136.90 115.38 125.63 188.01 80.91 88.15 112.74 99.87 80.23 13.49 15.15 150.78 94.69 111.38 87.55 144.52 148.35 67.18 118.53 74.84 144.33 23 E5b_E6a KnownJunction 0 12.22 19.40 111.20 141.27 75.38 178.65 70.97 82.52 104.72 84.45 49.01 5.70 13.15 110.42 66.01 78.36 46.84 141.77 111.25 61.04 86.36 62.95 114.47 24 ER6a ExonRegion 1 16.00 21.38 115.21 91.81 41.05 99.87 61.39 60.75 94.56 78.27 58.03 11.72 7.89 76.73 70.27 64.44 62.80 129.66 66.43 42.35 79.28 50.11 93.11 25 E6a_E7a KnownJunction 0 39.19 31.84 136.45 74.42 37.52 92.84 59.66 60.50 98.44 81.71 84.92 18.16 6.66 93.18 82.58 72.72 84.62 168.92 52.90 47.43 111.38 42.07 133.25 26 ER7a ExonRegion 1 31.82 29.67 125.15 74.58 39.17 106.06 56.54 82.97 105.81 93.35 117.72 9.72 22.22 145.45 86.47 72.74 94.54 176.32 94.78 60.66 117.05 56.02 114.05 27 E7_Ab KnownBoundary 0 27.56 37.76 104.96 63.06 63.33 140.03 57.46 94.10 110.24 90.20 85.02 11.55 39.93 165.70 91.35 67.85 100.98 132.61 123.30 84.12 116.39 38.82 134.36 28 ER7b ExonRegion 0 24.13 35.57 84.42 66.00 36.63 76.77 35.43 65.19 74.70 73.05 54.58 10.08 20.76 106.38 70.74 62.31 90.74 99.04 88.52 52.03 81.02 42.28 105.45 29 E7a_E8a KnownJunction 0 33.71 37.89 69.10 94.76 53.23 52.64 33.43 59.64 68.23 59.88 38.38 11.55 0.00 86.47 91.60 62.04 62.18 139.95 42.64 49.22 50.66 60.38 85.79 30 ER8a ExonRegion 0 33.01 47.68 125.12 111.59 72.33 153.92 71.13 91.12 79.43 94.08 74.03 17.83 24.47 106.55 67.70 90.66 91.26 145.29 82.29 66.65 95.19 63.65 114.44 31 E8_Da KnownBoundary 0 9.71 3.35 11.83 21.58 15.79 21.58 15.46 26.62 17.65 31.16 18.53 12.90 6.17 19.54 19.78 3.33 25.62 24.71 38.21 12.02 35.09 13.53 23.56 32 E8a_E8b KnownJunction 0 16.89 48.41 225.78 204.10 59.59 150.60 63.15 120.02 107.81 114.41 103.34 48.02 71.91 117.02 87.40 85.96 64.24 205.98 106.54 71.20 69.75 79.60 128.13 33 ER8b ExonRegion 0 14.23 5.60 20.92 16.25 9.67 23.00 16.75 31.68 12.56 31.40 16.42 13.55 8.87 21.87 16.72 18.69 21.34 36.06 57.27 20.98 38.29 27.04 42.92 34 E8_Ab KnownBoundary 0 20.30 11.77 40.42 27.00 3.23 31.63 18.72 37.62 14.32 24.87 12.27 0.00 0.00 22.54 26.70 15.98 13.00 16.58 26.54 11.44 27.06 5.63 28.08 35 ER8c ExonRegion 0 33.18 53.14 252.72 199.37 79.02 137.10 70.38 177.90 149.94 171.54 128.82 22.76 31.62 172.03 98.95 162.33 116.88 262.63 153.02 126.12 156.55 129.34 169.40 36 E8b_E9a KnownJunction 0 58.23 79.00 237.10 172.31 163.24 156.50 113.14 202.17 169.10 174.87 151.62 24.01 45.29 177.41 113.73 161.58 128.66 255.52 160.29 112.94 181.93 189.64 144.61 37 ER9a ExonRegion 0 41.31 84.14 219.47 162.47 97.46 201.50 93.53 154.99 141.20 166.31 122.25 22.41 23.84 174.20 78.68 155.81 107.45 201.54 124.38 80.93 134.06 131.78 141.27 38 E9_Da KnownBoundary 1 103.06 122.61 263.77 223.05 158.57 365.02 130.32 206.60 160.70 210.03 117.03 12.00 33.44 192.30 90.36 116.47 144.55 240.22 133.46 103.35 143.39 101.53 177.90 39 ER9b ExonRegion 0 123.60 144.69 209.77 160.92 122.83 323.75 138.72 170.27 176.20 189.35 129.43 29.49 48.67 234.46 100.83 178.27 161.18 228.98 167.02 123.28 166.44 130.75 163.07 40 E9b_E10a KnownJunction 0 198.11 156.55 231.63 156.56 136.42 316.01 181.33 203.93 214.38 212.96 163.78 57.32 72.88 229.33 124.85 203.45 177.84 299.58 203.77 112.81 220.85 170.90 160.31 41 E10_Aa NovelBoundary 0 16.45 2.50 46.15 19.91 25.30 32.59 19.70 18.15 7.41 22.38 6.58 0.00 11.69 18.84 8.90 19.40 12.81 29.06 77.56 11.89 16.43 20.45 15.62 42 ER10a ExonRegion 0 94.96 89.12 226.34 189.97 95.43 195.58 91.81 167.47 174.49 168.70 143.98 22.22 47.91 218.23 126.59 170.50 159.79 245.71 165.48 91.19 158.31 140.47 160.68 43 E10a_E11a KnownJunction 1 77.35 59.40 283.28 299.90 146.52 179.39 110.63 201.18 169.99 167.32 155.46 12.00 40.58 191.24 144.63 203.54 185.41 303.89 147.20 95.88 177.61 137.78 194.80 44 ER11a ExonRegion 1 55.07 68.11 273.69 206.61 96.37 154.43 75.91 177.82 156.30 197.03 162.53 14.13 40.89 170.42 122.87 136.46 160.01 275.70 122.55 95.48 206.65 133.71 145.70 45 E11_Da KnownBoundary 1 74.68 105.44 304.78 185.82 128.78 196.76 81.83 197.16 183.22 214.76 164.99 6.15 19.48 203.72 122.38 148.08 126.88 282.75 146.73 135.31 230.24 118.79 113.19 46 ER11b ExonRegion 0 35.93 55.76 252.87 217.46 71.17 148.09 74.35 134.26 155.70 163.20 111.07 22.21 44.41 159.70 127.86 133.31 129.97 230.94 91.66 98.13 166.60 108.65 140.86 47 E11b_E12a KnownJunction 0 51.12 84.13 399.28 359.59 143.12 311.47 134.70 222.50 248.41 259.97 161.73 32.41 46.26 214.85 206.19 165.17 144.74 399.94 104.66 112.17 240.13 157.19 229.97 48 E12_Ab NovelBoundary 1 45.93 79.13 370.39 249.65 109.85 239.29 80.91 244.31 212.24 218.36 152.56 36.31 18.02 197.01 135.73 183.29 166.99 370.47 150.31 111.15 185.64 177.76 224.25 49 ER12a ExonRegion 0 32.24 71.41 364.12 286.42 97.56 236.00 92.47 233.61 224.65 232.82 154.78 41.13 31.21 209.26 157.00 183.59 166.19 393.07 127.54 109.16 208.00 164.68 217.76 50 ER12b ExonRegion 0 51.28 74.16 277.86 215.58 70.76 169.65 78.56 191.56 162.28 176.31 131.04 30.34 63.73 176.99 144.67 144.60 122.30 309.58 131.37 92.26 162.87 126.16 188.53 51 E12a_E13a KnownJunction 0 113.65 79.00 290.00 252.25 87.44 184.84 64.12 229.32 153.88 184.11 122.24 73.07 61.85 170.11 87.52 118.00 139.88 282.63 93.84 91.15 169.02 78.20 185.92 52 E13_Aa NovelBoundary 0 21.78 2.70 57.66 4.96 8.40 4.71 19.74 11.79 9.32 18.83 6.90 6.90 15.10 7.42 14.09 29.56 24.31 46.72 21.55 8.37 8.96 0.00 4.18 53 ER13a ExonRegion 0 48.51 52.91 186.84 121.84 49.41 155.35 66.91 145.89 109.62 132.72 90.96 28.93 29.35 123.85 95.68 84.75 89.16 161.25 100.73 61.62 132.64 90.13 110.37 54 E13_Da KnownBoundary 0 0.00 3.35 13.66 2.73 4.07 5.74 1.94 1.64 7.70 5.78 0.00 0.00 0.00 4.94 0.00 8.03 12.62 22.47 3.67 21.80 5.56 5.69 8.71 55 E13a_E13b KnownJunction 0 31.34 44.01 248.90 179.06 53.65 167.23 87.04 166.72 106.83 120.45 52.86 6.00 13.15 56.15 23.98 70.92 57.78 168.72 64.19 35.86 77.47 60.07 116.26 56 ER13b ExonRegion 0 3.15 3.15 11.67 6.87 1.94 7.22 3.82 4.28 8.11 8.17 5.34 0.11 5.04 8.28 10.23 6.13 15.02 17.95 3.82 8.70 8.73 6.95 9.25 57 E13_Ab KnownBoundary 0 2.96 5.99 7.30 8.32 3.40 9.26 9.45 4.64 6.68 12.60 7.42 0.00 0.00 2.18 5.07 7.43 12.25 20.69 7.81 5.82 24.34 2.63 0.00 58 ER13c ExonRegion 0 27.76 43.20 192.06 123.97 47.52 134.56 59.71 127.93 104.49 109.73 78.09 26.61 57.31 120.08 95.97 93.76 88.30 153.59 83.05 67.53 109.25 100.25 111.68 59 E13b_E14a KnownJunction 0 60.83 64.20 296.83 213.86 68.85 144.92 83.51 178.88 179.40 188.52 75.91 30.76 53.41 120.90 88.26 142.27 135.48 237.15 125.74 54.52 107.86 96.99 106.02 60 ER14a ExonRegion 0 34.61 41.99 220.78 140.27 59.27 126.76 66.07 109.07 116.04 136.42 94.47 59.96 88.29 143.21 83.85 129.44 111.16 132.62 82.74 62.66 131.67 93.29 131.19 61 E14_Da KnownBoundary 0 53.86 56.11 208.48 164.98 68.59 150.94 69.03 120.26 114.61 140.41 104.24 88.98 113.30 172.64 82.21 156.80 86.77 119.51 62.40 83.09 131.28 86.95 147.51 62 ER14b ExonRegion 0 22.34 40.10 199.70 160.22 63.87 168.08 56.34 143.01 128.39 153.84 90.12 41.73 64.74 163.10 82.66 112.36 87.01 115.29 82.25 82.32 150.39 101.27 107.02 63 E14b_E15a KnownJunction 0 33.86 89.92 279.09 211.83 104.84 276.15 111.38 243.69 190.85 202.46 100.66 49.82 65.09 162.81 99.51 139.79 130.06 236.37 109.74 98.62 167.05 148.00 164.15 64 ER15a ExonRegion 0 48.73 82.57 253.56 210.00 102.45 268.71 100.72 227.57 200.70 202.16 141.52 64.94 84.08 184.93 136.81 174.03 132.00 302.30 145.07 107.61 189.78 147.50 196.47 65 E15a_E16a KnownJunction 0 83.79 96.10 279.26 246.92 100.17 309.54 95.52 242.75 218.52 220.54 171.41 109.39 147.39 179.29 121.52 158.51 113.42 289.30 187.30 164.97 224.44 147.33 253.87 66 ER16a ExonRegion 0 40.12 54.47 219.70 174.86 65.36 175.42 69.99 156.49 150.11 181.66 110.72 61.35 69.25 149.48 103.58 139.52 94.60 155.96 101.64 97.25 153.56 99.30 132.13 67 E16a_E17a KnownJunction 0 62.75 55.25 183.14 205.70 86.25 205.45 83.64 182.90 171.76 173.39 150.25 54.92 40.09 136.97 116.08 142.27 74.43 198.11 108.14 91.72 155.43 89.83 107.81 68 ER17a ExonRegion 0 38.62 41.99 171.75 103.50 52.75 160.07 64.33 131.88 109.97 135.94 97.90 34.40 31.05 111.49 95.91 80.87 77.04 124.49 83.59 70.67 114.55 94.64 104.24 69 E17_Da NovelBoundary 0 24.30 3.09 70.43 43.85 19.95 40.15 16.12 65.31 45.02 57.19 44.64 18.91 0.00 57.68 20.77 56.91 45.25 116.03 39.34 43.91 37.93 45.01 63.17 70 E17a_E18a KnownJunction 0 23.12 31.57 105.38 67.09 13.67 43.33 39.92 85.76 63.80 69.44 45.22 6.30 42.37 56.92 43.64 49.39 51.15 49.62 42.45 33.05 58.81 55.54 51.39 71 I17 Intron 1 19.44 11.31 31.33 13.25 18.76 35.02 18.88 26.15 16.02 28.08 28.50 7.94 5.60 35.40 22.15 33.05 20.74 47.08 23.87 26.23 35.67 25.68 27.68 72 I17_SR1 SilentIntronRegion 1 19.63 11.41 31.60 13.37 18.94 35.33 19.05 26.40 16.16 28.33 28.76 8.02 5.65 35.74 22.36 33.36 20.94 47.51 24.10 26.48 35.99 25.92 27.93 73 E18_Aa NovelBoundary 0 40.23 17.04 78.86 28.57 10.44 30.10 16.96 61.94 39.35 74.00 55.38 6.30 6.49 45.09 28.18 46.48 52.83 114.78 44.71 29.59 58.01 25.17 53.27 74 ER18a ExonRegion 0 74.81 48.89 144.57 81.85 41.97 139.82 53.61 96.55 94.60 111.04 89.80 17.36 22.20 128.78 95.51 88.96 103.80 95.65 79.19 57.20 100.29 76.50 113.92 75 E18a_E19a KnownJunction 0 140.40 148.72 352.26 269.70 102.55 249.80 107.01 216.38 222.71 188.49 126.24 38.11 46.26 194.95 173.56 240.96 184.10 346.47 239.35 124.13 147.40 178.43 262.92 76 ER19a ExonRegion 0 107.09 85.01 342.71 262.05 119.00 287.94 101.44 224.13 211.92 220.11 157.81 47.84 46.11 180.88 174.45 165.07 147.15 260.64 170.33 112.40 192.60 125.83 179.74 77 E19a_E20a KnownJunction 0 145.14 83.41 516.42 455.32 105.52 222.77 102.55 323.75 343.49 279.42 129.45 43.51 46.91 151.63 162.93 182.77 117.91 513.61 207.54 155.83 174.64 184.01 209.91 78 ER20a ExonRegion 0 181.96 92.59 443.94 384.04 113.93 236.17 126.54 291.27 263.09 256.89 187.30 53.22 71.38 213.96 223.57 202.16 164.26 277.22 189.68 168.28 225.22 194.40 204.96 79 E20_Da NovelBoundary 0 17.78 20.52 49.38 16.25 28.69 37.02 29.01 31.13 16.93 40.02 13.58 0.00 0.00 16.48 15.08 7.60 17.02 36.19 3.58 19.30 23.66 14.14 7.43 80 E20a_E21a KnownJunction 0 184.70 107.61 367.79 363.36 133.45 237.76 141.63 252.89 245.19 212.59 115.45 31.21 47.89 98.65 177.02 138.94 120.52 248.68 91.77 84.88 147.46 152.90 102.01 81 E21_Aa NovelBoundary 0 16.52 20.92 106.12 57.60 24.02 64.51 40.98 62.60 37.18 34.92 7.05 0.00 13.64 4.77 13.35 30.50 45.54 81.75 29.84 36.11 8.77 8.82 15.11 82 ER21a ExonRegion 0 199.03 149.55 322.74 297.60 213.77 399.63 155.87 230.89 221.91 188.89 150.90 58.05 122.19 194.14 197.35 214.56 137.42 338.38 156.67 133.62 182.06 170.66 241.37 83 E21_Da NovelBoundary 0 30.45 30.98 90.42 42.52 73.60 57.75 60.50 65.43 37.38 43.70 11.58 18.46 13.47 34.91 35.97 23.75 34.13 75.86 8.66 20.52 27.74 13.53 24.41 84 E21a_E22a KnownJunction 1 201.67 146.16 354.87 378.11 245.16 303.29 135.98 298.20 275.60 205.52 128.35 69.62 95.12 308.08 232.77 277.70 100.70 394.88 197.18 136.34 135.35 251.42 333.68 85 I21 Intron 0 7.04 11.27 10.12 7.88 16.32 32.55 23.49 11.42 9.18 14.21 12.86 3.95 6.42 11.55 24.41 26.36 7.32 23.94 10.59 10.62 14.66 5.77 11.40 86 I21_AR1 ActiveIntronRegion 0 7.20 11.52 10.32 8.04 16.68 33.25 24.01 11.68 9.37 14.51 13.12 4.04 6.57 11.78 24.95 26.95 7.48 24.45 10.79 10.85 14.99 5.90 11.65 87 E22_Aa NovelBoundary 0 26.45 29.86 121.02 113.74 75.21 98.75 91.73 140.51 50.23 84.21 24.16 23.86 39.93 48.21 49.32 106.90 52.36 137.67 82.36 28.89 44.23 50.82 40.89 88 ER22a ExonRegion 0 193.67 255.92 241.72 227.69 261.19 295.78 172.81 164.66 125.18 130.84 120.73 49.38 45.42 151.21 115.39 149.94 110.01 157.70 118.19 64.18 123.19 134.10 149.44 89 IG24 Intergenic 0 166.59 98.95 203.59 226.13 158.11 169.99 90.40 133.02 96.72 92.27 89.29 21.97 17.87 97.70 91.50 133.60 85.12 140.94 118.98 46.74 90.95 104.92 126.68 90 IG24_AR1 ActiveIntergenicRegion 0 220.30 130.63 266.69 299.11 209.03 224.63 118.78 175.01 127.36 120.42 117.89 29.14 23.17 129.39 120.78 176.46 112.21 185.38 157.14 60.99 120.29 138.78 167.58