Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CALU Gene 0 321.94 115.28 232.06 143.36 257.93 187.44 297.81 169.25 104.05 197.01 165.48 442.17 240.82 164.02 155.73 136.13 133.48 126.94 155.93 157.44 1085.44 1638.99 1048.55 2 249364 Transcript 0 199.72 71.71 196.60 109.05 189.78 137.46 195.34 129.70 64.01 138.61 90.52 206.06 134.07 77.83 114.60 61.64 68.83 45.13 94.26 89.03 476.04 1006.62 516.50 3 449187 Transcript 1 38.19 15.44 22.90 11.91 40.08 34.89 27.58 20.81 18.14 14.83 67.42 152.36 39.75 76.70 34.98 73.29 47.51 8.89 20.94 25.86 391.21 444.13 280.68 4 479257 Transcript 0 8.42 6.58 7.30 5.94 10.90 10.67 23.41 10.45 6.69 3.96 5.02 15.99 13.89 1.49 4.03 5.34 5.87 14.80 4.46 14.92 18.60 44.33 32.91 5 342367 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 493278 Transcript 0 33.73 11.87 15.57 13.77 59.61 38.86 49.32 19.03 11.01 15.01 6.60 25.87 20.03 10.08 24.56 12.22 5.68 6.56 7.75 14.98 14.80 94.64 37.39 7 ER1a ExonRegion 0 3.37 2.87 1.89 0.93 3.65 17.92 13.60 1.26 0.73 1.88 11.07 0.00 2.56 3.40 4.62 5.27 3.45 2.52 0.72 10.35 46.28 32.20 32.57 8 ER1b ExonRegion 1 76.25 40.37 33.65 13.53 67.42 165.35 150.80 21.12 28.86 41.51 67.04 10.77 43.13 61.95 82.79 82.20 65.05 50.52 39.39 78.98 725.56 636.13 852.49 9 E1a_E2a KnownJunction 0 2.89 6.58 0.00 0.00 3.74 7.44 5.39 6.74 1.77 0.00 4.42 0.00 0.00 0.00 0.00 4.02 0.00 19.44 0.00 5.94 10.50 34.60 22.71 10 E1a_E3a KnownJunction 0 117.58 42.62 109.49 46.55 119.78 96.48 142.29 83.79 92.10 170.14 87.97 91.98 51.94 72.16 84.93 185.76 159.70 228.33 127.63 135.44 1332.17 900.07 1836.08 11 ER1c ExonRegion 0 143.55 64.64 73.04 32.81 124.80 196.15 201.10 53.09 63.83 104.08 96.44 33.24 68.68 81.61 107.97 190.22 148.78 152.31 126.28 131.53 1518.43 1258.97 1975.73 12 ER2a ExonRegion 0 13.95 6.58 14.61 11.87 18.07 13.90 41.43 14.17 11.61 7.92 5.62 31.98 27.78 2.99 8.06 6.65 11.74 10.16 8.93 23.90 26.70 54.07 43.11 13 E2a_E3a KnownJunction 0 0.00 9.41 1.83 8.72 7.47 4.88 22.70 10.51 5.76 0.00 4.84 31.51 12.50 5.47 0.00 8.72 4.68 12.23 4.71 5.69 19.71 57.50 21.77 14 ER2b ExonRegion 0 0.00 6.78 3.57 8.75 14.49 8.86 22.29 12.96 5.35 0.10 3.87 32.11 16.42 6.63 0.00 11.39 0.00 12.78 3.19 12.77 15.98 71.88 27.65 15 ER3a ExonRegion 0 60.12 50.46 123.94 58.77 82.94 73.23 97.35 101.14 87.84 137.28 167.53 339.25 148.89 135.84 104.22 199.08 156.62 238.38 127.36 179.44 1677.35 1054.88 1473.76 16 E3a_E4a KnownJunction 0 41.19 55.78 108.66 56.30 295.08 290.06 239.89 117.92 64.64 133.24 147.67 447.15 245.44 155.63 98.15 109.80 151.85 217.26 88.00 190.15 1535.35 1010.97 980.22 17 E3a_E5a KnownJunction 1 0.00 13.29 13.72 7.39 65.37 50.99 8.26 22.02 14.81 10.15 68.23 141.65 27.27 54.92 27.81 62.46 22.53 9.24 9.22 34.26 435.96 302.98 255.75 18 E3a_E6a NovelJunction 0 0.00 0.00 3.61 1.63 4.33 7.15 11.08 2.38 3.01 4.19 5.26 0.00 14.77 0.00 0.00 0.00 11.87 5.89 0.00 3.07 0.00 6.06 0.00 19 I3_AR2 ActiveIntronRegion 0 20.75 33.74 22.18 20.10 28.37 7.85 31.09 21.17 11.84 17.84 5.30 27.62 46.55 4.10 3.36 7.18 1.97 1.30 7.03 12.19 4.65 38.78 13.66 20 I3_AR3 ActiveIntronRegion 0 28.90 32.08 25.52 21.33 32.63 10.02 34.79 16.46 11.74 7.45 8.96 41.98 34.73 3.50 12.30 12.34 10.74 8.85 7.79 11.46 36.27 46.80 31.70 21 E4_Aa NovelBoundary 0 181.59 84.72 48.14 40.69 103.23 46.22 81.57 14.21 5.73 6.47 12.53 20.41 48.05 16.83 27.44 27.00 16.46 5.10 4.80 27.48 67.03 64.79 58.82 22 ER4a ExonRegion 0 103.11 97.47 146.92 117.40 174.10 169.45 263.22 131.83 94.89 161.05 152.12 465.51 192.39 199.43 140.88 145.04 157.56 194.12 125.95 242.88 1695.47 1279.37 912.72 23 E4a_E6a KnownJunction 0 136.02 115.70 124.21 112.37 163.50 159.96 270.19 132.55 90.80 160.18 128.14 302.50 144.31 209.37 165.65 122.70 143.15 185.71 172.15 218.28 1432.12 1554.29 916.29 24 E5_Aa NovelBoundary 0 95.35 65.45 32.88 22.57 53.99 30.95 87.00 22.80 7.41 5.75 4.90 0.00 30.03 0.00 22.25 10.85 0.00 4.56 31.06 12.14 58.75 19.53 34.06 25 ER5a ExonRegion 0 77.07 33.02 36.29 20.11 51.06 29.87 49.48 25.74 19.61 22.18 75.70 200.94 70.88 74.99 46.36 71.61 69.98 12.69 32.43 32.27 414.15 457.97 328.59 26 E5a_E6a KnownJunction 1 37.49 0.00 18.69 8.22 3.82 23.79 25.00 14.66 19.99 12.14 58.33 114.49 21.10 100.18 30.78 85.79 50.02 4.73 21.18 11.06 323.53 571.43 257.71 27 ER6a ExonRegion 0 192.00 107.80 165.24 129.89 245.38 196.10 306.32 166.29 106.05 180.11 206.80 610.27 366.64 277.11 197.47 167.63 225.86 186.42 149.44 243.75 1686.58 1876.91 1312.30 28 E6_Ab KnownBoundary 0 237.52 124.06 158.16 142.34 190.92 174.56 341.82 147.29 100.32 196.55 264.54 921.30 310.04 278.65 275.05 159.53 224.40 222.15 262.50 263.79 1839.36 2136.44 1587.75 29 ER6b ExonRegion 0 130.10 112.93 160.41 125.06 171.18 162.55 296.73 160.08 121.17 208.20 262.80 529.23 268.96 325.11 203.90 224.53 185.47 183.42 203.14 258.21 1502.52 1736.54 1472.79 30 E6a_E7a KnownJunction 1 153.29 172.67 185.68 142.24 300.09 216.24 304.50 181.51 148.26 241.35 278.65 433.94 338.78 346.46 148.59 224.56 185.97 137.92 169.42 299.13 1423.84 2085.61 1293.17 31 ER7a ExonRegion 0 182.78 126.42 177.22 122.59 249.24 184.28 263.49 167.83 138.56 237.86 286.13 421.09 404.65 306.48 181.97 206.00 251.95 169.54 150.03 249.53 1816.51 2088.51 1429.42 32 E7a_E8a KnownJunction 0 220.63 115.18 193.93 119.47 261.71 164.00 336.74 190.71 146.21 210.28 214.37 565.68 361.50 238.10 177.14 155.43 235.81 186.71 176.95 299.90 1785.43 1949.86 1552.50 33 ER8a ExonRegion 0 196.07 125.09 208.72 129.92 239.12 201.70 346.35 188.92 137.68 232.94 259.97 753.26 316.46 308.00 221.38 217.14 209.11 264.96 203.67 260.45 2190.41 1941.11 1687.28 34 E8a_E9a KnownJunction 0 250.93 149.51 287.78 207.37 275.98 348.04 511.76 199.74 155.41 234.77 288.07 539.73 407.12 370.89 255.89 268.22 235.25 353.06 291.30 253.05 2874.56 2103.31 2007.48 35 ER9a ExonRegion 0 175.51 125.16 236.41 157.01 298.47 242.92 364.13 177.27 146.76 227.04 268.50 795.98 298.83 281.57 210.90 241.10 206.08 301.85 260.53 221.50 2411.98 2082.76 1790.50 36 E9_Da KnownBoundary 0 244.34 129.91 232.16 135.35 433.19 219.53 420.47 195.47 132.64 240.55 327.14 591.94 362.31 343.22 240.31 249.17 190.65 227.54 218.83 196.42 2417.72 2453.01 1662.70 37 E9a_E10a KnownJunction 0 6.52 0.00 5.03 3.53 0.00 0.00 5.48 4.85 1.53 0.00 4.79 0.00 13.31 4.94 17.80 12.48 0.00 0.00 4.14 3.20 9.02 27.92 0.00 38 ER9b ExonRegion 0 301.74 158.04 267.19 181.55 365.12 254.95 442.41 224.50 147.16 274.28 239.11 727.99 398.48 260.44 206.51 177.91 173.36 147.20 181.84 196.06 1380.54 2424.62 1261.11 39 E9_Db KnownBoundary 0 661.01 209.90 461.54 262.34 589.47 445.20 912.27 294.99 176.53 346.09 269.59 664.42 386.99 251.52 279.87 210.54 233.10 146.12 340.90 298.94 1669.90 3007.73 2001.76 40 ER9c ExonRegion 0 1076.29 245.53 464.62 286.47 488.01 340.49 538.95 296.91 174.14 355.51 271.80 708.59 389.90 225.29 233.61 231.73 206.32 211.12 325.35 229.43 1556.87 3080.11 1963.83 41 E9_Dc KnownBoundary 0 338.65 90.84 162.38 70.72 157.98 114.48 258.71 51.88 55.84 73.76 38.64 129.49 90.42 65.93 88.02 56.82 103.13 39.59 118.22 76.76 579.97 914.71 684.87 42 ER9d ExonRegion 0 396.06 140.55 391.30 217.17 375.92 256.99 377.09 258.14 127.29 275.33 169.97 412.12 265.58 152.26 224.58 118.02 134.22 87.73 187.79 167.72 905.80 1981.05 1000.42 43 E9_Dd NovelBoundary 0 80.38 34.40 85.57 57.44 108.91 77.80 146.18 89.05 69.10 89.64 25.90 132.94 35.55 17.36 30.04 46.74 39.93 30.10 17.98 60.53 39.41 512.22 162.62 44 I9 Intron 0 50.22 23.64 61.06 40.94 98.38 63.94 78.20 67.21 34.50 50.68 17.42 49.48 25.13 12.67 26.27 16.92 21.92 15.06 16.62 41.39 35.54 294.57 119.82 45 I9_AR1 ActiveIntronRegion 0 50.69 23.86 61.64 41.32 99.30 64.53 78.90 67.84 34.82 51.15 17.59 49.94 25.37 12.79 26.51 17.08 22.13 15.20 16.78 41.77 35.87 297.29 120.93 46 E10_Aa NovelBoundary 0 65.34 41.51 93.96 82.64 92.53 29.59 130.54 88.76 68.89 62.96 22.01 97.53 70.61 19.84 33.25 27.34 12.06 10.53 39.44 50.30 46.15 269.92 141.62 47 ER10a ExonRegion 0 60.93 23.75 26.12 24.01 119.23 77.72 93.17 33.22 20.48 30.02 8.40 51.73 26.75 15.22 31.32 11.96 11.36 13.12 11.36 26.76 20.58 161.37 74.78 48 IG28 Intergenic 0 50.60 43.97 42.76 41.93 125.76 68.83 90.00 60.74 28.84 44.07 12.30 45.05 11.98 11.52 17.44 16.01 20.47 18.98 22.09 31.94 38.82 212.53 123.41 49 IG28_AR1 ActiveIntergenicRegion 0 50.77 44.11 42.90 42.06 126.15 69.05 90.28 60.93 28.93 44.21 12.34 45.20 12.01 11.56 17.49 16.06 20.54 19.04 22.16 32.04 38.95 213.19 123.80