Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ING3 Gene 0 27.52 37.73 34.80 27.87 53.92 50.69 37.70 24.74 12.66 21.38 35.75 56.23 59.75 65.12 44.46 28.40 62.51 12.61 17.88 19.31 6.75 24.44 11.75 2 315870 Transcript 0 8.04 13.66 8.12 12.68 15.29 9.68 6.94 5.06 2.83 6.82 3.68 11.46 8.74 7.63 8.23 2.49 5.50 1.75 4.07 4.24 0.37 4.47 1.34 3 445962 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 339121 Transcript 0 1.44 4.34 7.75 4.44 17.15 32.88 35.48 7.58 1.78 0.59 10.06 6.30 7.22 9.92 18.91 5.67 4.53 0.00 0.00 0.00 1.58 15.55 0.00 5 427726 Transcript 0 0.00 27.23 10.56 19.08 4.33 15.39 18.77 6.20 6.22 9.59 15.21 6.30 6.82 4.94 4.45 10.85 14.31 0.00 13.08 2.62 5.25 14.63 3.59 6 445699 Transcript 0 15.65 6.61 13.72 5.45 17.84 6.82 12.43 14.92 5.60 4.68 17.66 27.99 23.73 10.44 9.71 4.56 18.28 0.82 1.54 7.38 0.63 8.38 2.07 7 431467 Transcript 0 1.60 1.70 0.48 0.08 4.31 10.03 3.49 0.53 0.13 1.03 2.68 0.71 1.24 3.38 0.41 0.36 6.20 0.34 0.20 0.22 3.55 0.34 1.08 8 497502 Transcript 0 3.11 2.03 2.02 1.64 3.70 4.37 2.14 1.27 0.62 1.69 4.04 7.13 7.59 6.69 1.96 2.88 5.44 0.54 1.31 1.81 0.26 1.47 0.69 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ad KnownBoundary 0 22.37 76.17 9.02 8.89 44.40 133.73 80.69 5.46 4.92 6.07 28.90 0.00 33.60 61.16 73.68 57.16 92.10 25.08 27.95 11.31 24.40 21.68 43.54 12 ER1b ExonRegion 0 1.83 7.30 1.39 1.67 5.35 21.51 12.04 1.02 0.39 1.04 2.72 0.00 6.61 4.95 13.58 5.40 10.80 3.02 2.90 2.03 4.01 3.31 4.54 13 ER1c ExonRegion 1 15.66 56.53 9.31 8.59 38.26 94.44 58.92 5.19 3.71 6.42 17.59 0.00 18.76 60.25 70.21 50.23 82.85 16.81 23.25 9.79 17.85 20.42 26.43 14 ER1d ExonRegion 0 39.00 59.84 21.93 17.97 70.21 78.85 77.57 22.90 13.39 20.82 52.79 13.22 24.07 82.09 43.81 73.04 117.19 45.03 38.15 25.02 19.41 30.49 38.04 15 E1a_E2b KnownJunction 1 15.11 27.30 16.17 3.56 8.49 14.31 8.92 26.82 7.64 20.63 53.54 36.76 60.06 31.14 8.90 3.42 85.09 14.38 3.76 6.33 32.80 3.12 3.24 16 ER2a ExonRegion 0 1.60 1.70 0.48 0.08 4.31 10.03 3.49 0.53 0.13 1.03 2.68 0.71 1.24 3.38 0.41 0.36 6.20 0.34 0.20 0.22 3.55 0.34 1.08 17 E2_Ab KnownBoundary 0 3.78 3.35 0.00 0.00 15.62 38.27 15.28 0.00 0.00 1.40 2.58 0.00 0.00 14.83 0.00 0.00 13.46 0.00 0.00 0.00 6.30 0.00 3.93 18 ER2b ExonRegion 1 15.20 26.92 30.27 18.97 20.65 56.87 18.26 34.67 16.94 30.27 104.51 18.42 39.30 146.72 74.62 75.85 200.15 31.91 24.09 30.96 32.59 41.26 34.50 19 E2a_E3a KnownJunction 0 9.63 23.61 50.65 46.55 4.33 25.27 13.82 44.15 27.66 37.31 120.77 30.46 46.26 223.85 165.89 144.92 225.34 67.03 58.54 40.33 14.39 88.91 87.41 20 ER3a ExonRegion 0 9.37 24.34 55.23 38.89 83.19 70.86 58.83 44.38 18.60 32.86 118.56 52.68 96.59 147.25 81.69 97.64 141.78 63.94 65.28 46.26 21.27 65.56 54.87 21 E3a_E4a KnownJunction 1 16.97 34.20 69.04 40.92 191.09 146.51 159.87 41.36 28.30 35.86 143.83 87.63 95.45 138.27 78.87 30.42 255.17 30.22 46.59 30.04 16.87 54.62 15.37 22 E4_Aa NovelBoundary 0 3.78 3.35 0.00 0.00 25.30 0.00 8.04 5.71 1.59 0.99 0.00 0.00 0.00 12.30 0.00 0.00 13.46 0.00 0.00 3.26 0.00 0.00 0.00 23 ER4a ExonRegion 0 16.64 66.80 72.82 39.07 135.37 151.65 173.62 43.84 28.86 42.73 137.27 119.78 134.31 193.42 73.67 83.99 215.91 21.25 24.52 47.81 13.32 68.00 23.76 24 E4_Da KnownBoundary 0 22.37 17.56 7.27 1.96 18.93 5.68 29.10 6.41 5.27 1.67 18.74 6.15 0.00 16.72 0.00 0.00 16.64 1.78 0.00 9.33 0.00 0.00 0.00 25 E4a_E4b KnownJunction 0 2.89 8.68 15.49 8.89 34.30 60.25 70.97 15.16 3.56 1.18 20.11 12.60 14.45 19.84 37.83 8.37 9.07 0.00 0.00 0.00 3.15 31.11 0.00 26 E4a_E5a KnownJunction 1 9.85 70.05 43.73 23.67 32.94 47.87 55.12 19.59 10.59 28.18 56.75 56.72 101.62 156.40 48.71 76.22 118.56 14.59 18.64 32.28 8.09 30.19 7.00 27 E4a_E6a KnownJunction 0 0.00 27.23 10.56 19.08 4.33 15.39 18.77 6.20 6.22 9.59 15.21 6.30 6.82 4.94 4.45 10.85 14.31 0.00 13.08 2.62 5.25 14.63 3.59 28 ER4b ExonRegion 0 15.65 6.61 13.72 5.45 17.84 6.82 12.43 14.92 5.60 4.68 17.66 27.99 23.73 10.44 9.71 4.56 18.28 0.82 1.54 7.38 0.63 8.38 2.07 29 E4_Ab KnownBoundary 0 20.08 9.41 10.85 3.80 28.86 14.99 26.19 12.77 6.34 6.77 16.74 37.66 34.25 9.54 8.90 10.60 13.00 0.00 0.00 2.75 0.00 14.39 4.27 30 ER4c ExonRegion 0 22.26 10.67 31.16 11.07 40.57 29.90 40.88 41.01 9.29 15.14 30.81 50.04 38.76 37.76 37.80 15.37 29.79 1.13 3.51 6.58 1.90 23.45 11.22 31 ER4d ExonRegion 0 16.31 20.10 22.78 10.90 30.69 20.28 33.33 32.13 3.78 15.45 19.10 59.08 51.31 37.16 40.11 7.52 11.46 1.85 0.00 5.51 0.00 43.88 4.66 32 ER4e ExonRegion 1 12.28 9.41 20.97 7.92 21.85 14.74 17.08 28.65 4.38 8.79 6.71 29.98 14.96 18.42 21.06 7.57 6.67 0.50 4.94 3.52 0.38 30.67 3.68 33 ER4f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 5.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 I4_SR2 SilentIntronRegion 0 4.39 2.78 3.79 2.70 6.35 3.19 4.67 6.24 3.19 5.34 3.49 7.92 16.98 6.60 3.13 5.58 7.19 2.45 3.37 4.13 1.80 3.48 3.71 35 I4_AR3 ActiveIntronRegion 0 1.85 2.60 0.53 0.78 3.76 2.84 4.21 2.88 1.14 1.75 4.34 7.49 19.55 5.46 2.05 3.42 3.57 2.90 0.41 7.26 0.56 6.59 0.81 36 E5_Aa NovelBoundary 0 5.78 6.25 0.00 4.00 0.00 2.90 6.36 2.09 4.25 9.21 2.47 18.61 6.82 4.89 8.90 3.33 16.64 2.16 0.00 2.49 0.00 16.47 0.00 37 ER5a ExonRegion 0 21.78 51.93 44.87 29.14 34.37 59.48 36.92 30.49 23.57 39.35 83.75 62.89 119.33 126.16 62.69 58.49 134.08 17.24 27.49 38.89 10.86 37.16 15.95 38 E5_Da NovelBoundary 0 0.00 9.41 1.18 3.43 8.15 4.54 6.14 0.00 3.30 9.03 9.79 0.00 0.00 2.47 0.00 4.27 4.77 0.00 0.00 2.49 2.47 12.12 0.00 39 E5a_E6a KnownJunction 0 20.37 15.92 38.94 28.00 11.63 83.59 29.46 34.34 28.10 44.81 60.07 73.52 85.55 85.70 62.80 33.58 129.03 4.89 28.33 35.35 5.56 35.27 12.04 40 E6_Aa NovelBoundary 0 12.97 0.00 3.67 2.86 3.65 13.80 3.93 2.55 3.44 0.00 5.37 18.91 0.00 5.47 0.00 8.72 0.00 0.00 4.80 2.75 0.00 6.25 3.50 41 ER6a ExonRegion 0 39.92 57.67 62.75 50.20 50.06 86.85 47.18 41.07 23.74 54.25 82.36 89.96 116.34 128.10 56.09 56.59 146.06 6.83 32.52 45.63 13.65 43.00 11.58 42 E6a_E7b KnownJunction 0 80.68 85.91 82.40 59.43 147.45 180.12 75.92 48.26 20.17 60.98 146.88 163.25 266.05 175.35 72.81 108.35 174.19 23.21 49.13 65.83 10.38 55.36 33.38 43 ER7a ExonRegion 0 3.11 2.03 2.02 1.64 3.70 4.37 2.14 1.27 0.62 1.69 4.04 7.13 7.59 6.69 1.96 2.88 5.44 0.54 1.31 1.81 0.26 1.47 0.69 44 E7_Ab KnownBoundary 0 3.70 0.00 10.35 1.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.65 6.66 3.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER7b ExonRegion 0 34.86 80.88 69.82 55.34 112.09 130.40 81.41 42.24 27.04 51.33 91.46 146.55 224.77 184.54 74.41 81.70 178.36 23.94 51.64 47.11 9.17 56.01 29.19 46 E7a_E8a KnownJunction 1 24.30 65.12 63.60 68.02 90.24 103.01 75.61 39.72 23.93 29.95 51.07 132.04 107.14 178.59 49.08 58.79 145.39 17.99 49.88 50.30 15.32 48.62 11.87 47 ER8a ExonRegion 0 14.87 54.64 73.38 56.14 77.19 105.61 59.94 35.84 24.55 39.09 70.93 149.39 181.49 171.66 78.94 75.73 160.99 28.70 35.95 38.78 21.95 44.90 33.36 48 E8a_E9a KnownJunction 1 23.78 43.87 96.48 80.41 69.35 152.30 72.52 37.42 24.33 42.36 82.71 185.01 283.75 248.16 86.04 90.49 148.57 71.34 83.67 43.98 35.77 50.15 45.75 49 I8 Intron 0 15.07 8.59 2.27 2.02 10.19 3.19 7.23 1.92 0.91 1.98 1.60 3.16 8.02 5.31 5.40 2.46 3.55 0.00 1.58 2.82 0.18 1.55 0.49 50 I8_SR1 SilentIntronRegion 0 33.75 11.88 3.96 0.61 8.85 2.09 4.75 0.00 1.00 1.40 1.05 2.16 13.22 4.91 6.33 1.61 0.00 0.00 0.00 1.43 0.00 1.13 1.59 51 I8_AR1 ActiveIntronRegion 0 2.12 4.65 5.78 3.02 29.62 8.51 19.01 0.00 1.06 3.03 0.97 6.18 4.69 4.87 1.04 2.55 4.24 0.00 0.00 4.10 0.00 1.79 0.00 52 I8_AR2 ActiveIntronRegion 0 13.85 9.29 1.94 2.55 10.64 3.65 7.94 2.35 1.01 2.37 1.98 3.76 8.25 6.22 5.82 3.01 4.82 0.00 1.79 3.34 0.26 1.69 0.34 53 E9_Aa NovelBoundary 0 54.90 5.66 0.00 5.13 43.63 16.13 11.48 3.41 4.25 2.71 0.00 12.60 0.00 2.47 9.89 0.00 3.65 0.00 11.67 3.26 0.00 0.00 0.00 54 ER9a ExonRegion 0 49.73 87.98 84.92 58.98 112.23 156.06 83.77 43.91 29.14 44.81 113.97 142.27 165.82 217.94 104.88 103.38 245.63 63.31 61.36 56.64 38.34 55.71 37.09 55 E9_Da NovelBoundary 0 18.52 5.99 0.00 1.83 0.00 0.00 6.05 1.89 0.00 2.47 2.63 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 0.00 0.00 0.00 56 E9a_E10a KnownJunction 0 122.98 173.19 85.07 77.45 171.31 217.55 104.31 67.11 28.56 60.14 109.45 210.37 198.04 251.40 153.66 133.21 345.77 74.49 94.78 89.61 50.84 43.72 27.74 57 ER10a ExonRegion 0 67.31 112.68 74.09 61.41 132.84 122.38 97.31 49.70 23.23 34.38 96.70 144.22 150.62 180.76 123.04 84.30 230.96 55.54 54.99 58.19 24.56 50.64 27.74 58 E10_Da NovelBoundary 0 6.37 3.03 2.84 4.73 3.65 0.00 8.66 7.23 5.30 6.77 2.68 18.61 27.27 5.30 0.00 0.00 16.92 1.87 4.52 0.00 0.00 0.00 0.00 59 E10a_E11a KnownJunction 0 88.46 80.58 78.65 57.77 126.74 138.05 105.33 26.45 13.72 32.34 75.28 150.80 108.76 174.76 132.64 73.48 249.46 31.34 48.94 49.41 10.81 42.19 38.84 60 I10 Intron 0 2.76 3.64 2.93 3.78 5.88 6.90 5.47 3.07 2.06 5.29 3.53 9.33 11.04 8.06 2.08 2.77 6.39 1.71 0.71 2.22 0.25 7.99 0.77 61 I10_SR1 SilentIntronRegion 0 2.77 3.65 2.94 3.80 5.90 6.92 5.49 3.08 2.06 5.30 3.54 9.36 11.08 8.09 2.09 2.78 6.42 1.72 0.71 2.23 0.25 8.02 0.77 62 E11_Aa NovelBoundary 0 13.04 2.76 6.03 7.96 8.66 15.33 0.00 7.64 3.12 0.00 4.95 6.45 20.45 5.24 5.19 8.29 4.30 0.00 0.00 7.99 0.00 11.57 0.00 63 ER11a ExonRegion 0 67.84 83.32 86.34 64.34 127.48 131.28 61.34 40.46 20.97 38.64 80.29 157.86 198.54 189.86 117.39 78.34 182.14 30.84 58.40 38.35 20.62 44.02 24.32 64 E11_Da NovelBoundary 0 14.15 5.59 5.50 4.86 0.00 8.69 26.94 3.78 1.24 6.80 10.42 18.31 26.78 10.12 0.00 0.00 3.55 0.00 0.00 2.62 0.00 15.80 0.00 65 E11a_E12a KnownJunction 0 89.57 121.95 85.12 59.73 138.79 114.65 50.48 53.97 24.45 37.47 88.13 181.86 270.60 227.56 170.22 78.87 160.73 24.95 80.94 32.66 21.25 44.09 8.71 66 I11 Intron 0 15.86 7.06 9.16 11.30 18.76 13.99 9.81 8.23 4.74 6.11 6.64 18.90 10.38 10.56 5.94 6.43 5.56 2.12 2.30 3.87 0.60 11.88 2.72 67 I11_SR1 SilentIntronRegion 0 15.88 7.07 9.17 11.32 18.79 14.01 9.82 8.24 4.75 6.12 6.65 18.92 10.39 10.58 5.95 6.44 5.57 2.12 2.30 3.88 0.61 11.90 2.73 68 E12_Aa NovelBoundary 0 45.34 21.90 10.61 19.48 22.41 34.24 22.13 14.46 5.18 13.38 11.42 24.31 0.00 9.65 19.66 7.43 8.98 2.40 15.81 3.26 0.00 6.25 0.00 69 ER12a ExonRegion 0 66.21 101.44 83.77 49.16 129.87 128.31 87.96 42.96 28.00 43.88 56.18 107.93 129.36 157.89 127.79 52.98 113.85 19.75 37.45 35.35 11.75 41.08 19.68 70 E12_Da KnownBoundary 1 62.01 70.51 68.45 31.43 125.98 127.54 49.90 29.29 32.93 44.91 37.59 146.75 147.07 106.30 109.65 27.43 65.64 7.30 8.09 28.44 3.03 49.17 15.79 71 ER12b ExonRegion 0 89.29 58.13 65.02 48.03 124.55 108.83 66.31 37.08 33.24 41.95 47.00 131.03 121.84 105.96 97.78 32.38 58.29 8.09 21.59 35.62 3.90 40.52 10.71 72 E12_Db KnownBoundary 0 43.79 20.26 33.68 15.95 54.16 54.63 29.72 27.31 24.31 21.11 33.06 59.27 53.89 39.14 52.17 24.69 24.50 12.64 17.98 30.87 0.00 33.19 7.60 73 ER12c ExonRegion 0 16.08 27.33 16.24 25.37 30.58 19.36 13.89 10.12 5.65 13.64 7.36 22.92 17.49 15.25 16.46 4.98 11.00 3.49 8.13 8.49 0.75 8.93 2.69