Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SYPL1 Gene 0 155.50 16.56 70.43 69.47 174.03 86.90 91.69 80.58 67.90 51.19 407.25 269.54 316.69 411.37 336.62 156.89 202.69 10.21 38.02 15.61 91.23 446.20 171.91 2 483448 Transcript 0 0.00 0.00 0.60 0.00 0.44 0.00 0.00 0.00 0.00 0.00 1.13 0.00 1.28 0.93 0.90 0.98 4.17 0.00 0.00 0.00 0.00 0.00 1.95 3 11473 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 455385 Transcript 1 66.79 4.72 6.33 8.58 29.94 37.00 27.36 9.02 7.21 5.17 71.38 2.83 5.34 117.62 84.55 79.97 94.95 4.69 11.06 2.57 45.77 69.38 102.36 5 470347 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 1.56 2.32 0.00 6.66 13.48 0.00 8.72 4.11 0.00 0.00 6.33 0.00 2.39 0.00 6 464029 Transcript 0 4.65 2.54 0.15 0.04 2.42 3.84 3.19 2.61 0.08 0.68 6.62 2.16 11.32 18.44 19.10 5.11 6.74 0.00 2.99 7.95 2.37 2.45 0.00 7 460770 Transcript 0 14.74 1.79 8.89 3.99 18.06 10.81 10.52 8.57 5.36 6.65 26.48 10.45 14.76 19.24 14.21 15.07 13.18 0.03 2.36 2.93 4.24 11.60 3.65 8 ER1a ExonRegion 0 0.15 0.04 0.00 0.99 0.11 1.12 1.47 1.13 3.43 0.67 2.66 0.00 0.34 4.16 2.37 1.73 1.99 0.00 3.48 0.04 4.54 3.34 3.54 9 E1a_E2c KnownJunction 0 0.00 0.00 0.00 1.27 0.00 0.00 1.90 1.77 3.47 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.29 2.45 0.00 10 ER2a ExonRegion 1 119.82 9.44 11.44 11.70 57.20 74.00 52.74 11.13 12.56 8.05 140.82 1.33 6.00 226.31 153.14 159.93 189.91 7.54 22.13 5.14 91.54 132.52 204.72 11 E2_Ab KnownBoundary 1 152.99 22.10 24.75 31.33 125.47 89.72 79.71 20.04 29.22 12.17 242.22 0.00 0.00 192.01 109.28 203.28 235.90 6.26 42.92 6.52 158.58 92.46 239.27 12 E2_Ac KnownBoundary 1 157.36 6.64 10.91 16.12 183.11 167.52 120.74 15.61 24.77 16.22 321.29 23.86 38.31 270.82 114.10 222.33 337.73 13.22 24.75 6.01 209.05 58.05 219.30 13 ER2b ExonRegion 1 198.11 20.54 27.82 32.71 203.62 201.72 131.07 30.42 43.72 26.95 444.95 17.32 33.30 426.82 237.61 348.33 477.97 19.40 57.97 9.36 303.01 144.18 367.67 14 ER2c ExonRegion 1 126.54 18.82 27.37 32.50 145.58 232.69 110.71 29.12 43.92 26.98 453.63 54.82 106.75 295.45 157.04 206.25 309.96 22.80 57.11 19.18 258.83 147.20 271.83 15 E2_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 4.45 0.00 4.58 0.00 0.00 0.00 0.00 0.00 0.00 16 E2a_E3a KnownJunction 1 81.35 0.00 39.47 24.47 58.57 43.33 15.50 25.34 43.92 17.38 546.56 82.08 100.97 209.25 171.70 60.41 325.95 12.73 14.02 13.93 268.92 124.37 78.02 17 ER2d ExonRegion 0 0.00 0.00 0.60 0.00 0.44 0.00 0.00 0.00 0.00 0.00 1.13 0.00 1.28 0.93 0.90 0.98 4.17 0.00 0.00 0.00 0.00 0.00 1.95 18 ER3a ExonRegion 1 58.35 8.70 55.65 53.32 46.60 36.90 27.65 56.91 81.18 50.56 972.40 190.29 175.78 580.10 415.81 379.48 545.36 26.25 61.87 24.63 343.81 473.08 391.72 19 E3a_E4a KnownJunction 1 73.05 29.40 132.73 112.34 139.81 60.14 67.26 89.34 152.63 108.31 1185.83 244.43 340.56 892.46 551.09 632.65 427.21 49.79 122.64 62.26 219.31 515.59 680.43 20 ER4a ExonRegion 1 64.85 13.05 72.33 69.32 176.75 71.77 79.84 54.88 108.96 63.69 975.04 280.81 339.12 740.73 460.90 430.96 400.14 38.39 83.53 30.38 250.43 486.91 463.99 21 E4_Ab KnownBoundary 0 95.87 19.14 67.83 73.75 292.87 135.66 150.29 54.55 105.55 61.76 777.20 299.95 388.29 575.55 485.82 291.89 389.81 26.32 62.21 24.29 237.66 470.95 313.88 22 ER4b ExonRegion 0 139.55 34.88 65.49 82.96 251.72 204.23 145.89 74.14 97.41 57.79 947.99 393.83 437.65 804.16 545.47 271.52 460.76 16.83 50.06 20.79 220.10 556.52 276.08 23 E4a_E5b KnownJunction 0 257.53 5.79 48.87 70.25 139.64 18.46 40.76 73.32 66.00 27.69 912.07 486.91 506.30 733.83 696.95 273.69 463.77 2.11 8.47 2.43 247.23 701.25 309.27 24 I4_SR2 SilentIntronRegion 0 3.61 2.03 0.00 4.33 2.52 0.00 19.39 5.19 1.38 1.15 2.27 4.33 22.07 4.68 0.00 2.97 9.90 1.85 6.37 2.13 0.00 0.00 0.00 25 E5_Aa NovelBoundary 0 9.93 5.13 8.16 8.12 23.26 5.34 16.21 7.56 1.42 9.00 12.58 36.16 32.95 20.01 8.90 7.60 0.00 0.00 17.04 0.00 0.00 3.12 0.00 26 ER5a ExonRegion 0 14.74 1.79 8.89 3.99 18.06 10.81 10.52 8.57 5.36 6.65 26.48 10.45 14.76 19.24 14.21 15.07 13.18 0.03 2.36 2.93 4.24 11.60 3.65 27 E5_Ab KnownBoundary 0 17.19 3.16 11.97 10.85 19.02 0.00 14.49 8.38 7.55 8.78 22.53 13.05 12.01 9.89 19.66 11.19 22.72 0.00 4.80 0.00 2.53 2.33 0.00 28 ER5b ExonRegion 0 244.04 23.78 80.16 108.25 190.75 100.39 121.49 88.64 97.40 75.96 989.30 417.82 608.63 1044.55 637.78 395.85 518.94 22.06 85.94 21.83 256.24 723.05 388.18 29 E5a_E6a KnownJunction 1 0.00 0.00 0.00 0.00 7.98 2.73 0.00 2.18 0.00 1.24 17.37 6.30 0.00 35.14 0.00 19.48 9.07 1.87 0.00 0.00 0.00 8.76 4.18 30 E5a_E7a KnownJunction 0 184.18 30.13 89.74 122.20 151.44 110.90 130.37 91.84 93.26 82.25 782.67 375.27 648.82 796.17 619.69 216.27 382.89 16.95 71.72 23.71 147.96 456.62 247.64 31 E6_Aa NovelBoundary 0 19.93 23.29 1.12 3.00 10.95 17.89 10.33 3.04 6.92 3.28 4.00 11.40 24.35 2.12 4.70 3.59 4.11 10.74 8.38 4.73 2.29 0.00 16.48 32 ER6a ExonRegion 0 10.58 10.71 0.96 0.01 12.22 11.85 16.47 3.34 2.52 2.80 22.05 12.01 21.50 38.89 46.91 28.88 28.84 5.96 9.86 17.88 5.68 15.86 20.14 33 E6_Da NovelBoundary 0 748.21 418.87 702.19 681.80 358.32 327.20 483.49 773.79 688.13 649.01 215.21 74.87 68.18 45.50 145.13 391.52 318.47 911.93 305.04 351.42 239.39 284.55 399.93 34 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 1.56 2.32 0.00 6.66 13.48 0.00 8.72 4.11 0.00 0.00 6.33 0.00 2.39 0.00 35 E6_Db NovelBoundary 0 97.87 72.42 75.96 113.11 96.60 36.46 135.62 90.98 100.72 87.73 47.91 17.41 49.19 25.55 65.02 34.18 84.99 94.06 48.38 86.03 54.36 33.56 49.94 36 E6b_E7a KnownJunction 0 3.48 0.00 0.00 0.00 0.00 0.00 0.00 1.97 0.00 0.00 5.26 0.00 6.82 19.42 22.25 4.27 8.32 0.00 0.00 6.33 2.53 2.69 0.00 37 ER6b ExonRegion 0 5.82 5.08 0.31 0.09 4.85 7.68 6.37 3.24 0.15 1.36 7.97 4.33 15.83 17.46 15.96 5.94 5.16 0.00 5.97 9.57 2.20 2.21 0.00 38 ER7a ExonRegion 0 166.61 30.22 91.74 84.15 255.17 114.74 139.13 99.12 93.83 72.97 681.34 372.78 574.52 759.68 469.34 282.70 349.68 17.72 62.44 26.74 145.52 702.73 266.13 39 E7_Da KnownBoundary 1 172.62 14.27 96.92 90.46 228.61 155.76 167.51 110.41 91.69 50.37 290.65 282.09 589.73 460.83 346.50 213.19 113.23 10.24 35.30 34.64 57.64 767.26 199.15 40 ER7b ExonRegion 1 256.67 21.55 77.58 103.06 285.88 123.58 147.33 117.49 92.82 64.57 339.02 433.89 574.22 455.77 309.61 138.46 154.68 7.30 42.15 20.79 36.80 628.98 155.31 41 E7_Db KnownBoundary 1 349.99 26.84 82.94 130.59 351.53 141.96 164.77 131.81 70.31 48.59 221.37 466.80 756.12 372.18 363.56 100.40 71.06 5.84 48.19 15.47 19.71 639.58 157.07 42 ER7c ExonRegion 1 343.55 40.96 90.51 132.80 385.74 129.87 132.32 130.43 95.72 59.16 256.26 483.86 726.58 439.65 335.09 133.57 111.97 8.09 40.39 14.64 22.39 848.91 169.80 43 E7_Dc KnownBoundary 1 506.31 49.46 110.05 94.43 399.92 150.71 166.01 125.97 106.71 69.57 311.97 486.76 611.00 436.99 318.19 131.93 157.08 7.17 34.17 25.18 25.45 718.82 150.92 44 ER7d ExonRegion 0 230.91 17.37 122.67 104.14 246.76 97.61 119.59 136.00 93.71 77.38 348.86 384.82 370.23 379.64 460.65 116.08 139.25 7.86 38.38 16.78 42.85 603.48 149.41 45 ER7e ExonRegion 0 13.76 0.00 1.23 5.45 2.68 0.00 1.99 6.91 1.85 2.29 1.93 4.33 4.69 8.93 15.96 0.00 0.00 1.85 0.00 0.00 0.00 6.25 0.00 46 IG16_AR2 ActiveIntergenicRegion 0 5.58 0.77 6.15 4.04 5.37 1.40 2.36 1.96 2.10 3.43 4.76 14.57 13.69 4.44 6.45 4.57 5.37 0.00 1.14 0.81 0.00 4.88 1.07