Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC004893.2 Gene 0 10.67 15.23 25.18 18.93 29.72 29.75 19.36 29.26 15.03 24.93 7.49 6.66 7.16 17.06 13.95 20.56 15.75 37.50 19.03 27.66 8.53 8.73 12.96 2 360902 Transcript 0 16.33 18.86 42.17 24.92 56.81 39.92 22.11 33.10 16.74 30.74 10.55 9.78 6.84 23.66 20.70 24.06 16.29 34.09 19.90 25.17 8.47 8.61 11.03 3 ER1a ExonRegion 0 10.39 17.45 30.67 24.68 32.41 37.86 22.14 40.32 19.30 34.41 8.55 5.51 7.79 21.72 15.21 24.90 19.32 51.40 25.10 36.13 8.94 10.20 15.64 4 E1_Da NovelBoundary 0 13.48 3.29 22.89 14.58 27.08 15.50 20.49 29.37 13.60 20.44 6.84 5.40 6.33 0.00 9.64 18.97 21.13 24.37 44.80 26.14 2.53 0.00 19.55 5 E1a_E2a KnownJunction 0 22.82 14.73 41.84 21.04 38.03 61.16 24.02 37.79 21.76 27.43 4.79 18.01 0.00 19.37 29.79 37.51 8.51 33.25 28.52 14.51 3.15 5.27 11.61 6 I1 Intron 0 14.03 18.09 14.49 20.37 29.11 11.02 17.11 12.55 7.20 10.65 2.52 7.22 14.04 4.05 5.14 12.29 7.29 9.01 10.83 16.40 2.75 1.65 6.49 7 I1_SR1 SilentIntronRegion 0 14.10 18.17 14.55 20.45 29.24 11.06 17.18 12.60 7.23 10.70 2.53 7.25 14.10 4.07 5.15 12.35 7.33 9.05 10.88 16.47 2.76 1.66 6.51 8 E2_Aa NovelBoundary 1 45.93 45.06 96.12 59.50 62.22 81.03 48.40 53.97 56.94 73.23 60.65 29.86 31.65 67.28 37.33 93.65 26.65 125.48 72.47 97.54 108.79 146.23 123.01 9 ER2a ExonRegion 0 14.15 19.00 35.36 15.44 43.47 46.88 30.35 34.49 21.82 30.72 10.00 9.75 3.63 25.22 22.28 20.35 18.93 45.07 20.27 29.11 10.53 11.84 10.09 10 E2_Da NovelBoundary 0 30.30 7.76 22.38 12.85 16.13 18.91 7.29 29.41 5.90 8.35 7.16 6.00 0.00 2.24 13.23 9.74 7.48 18.61 7.15 27.87 3.15 7.23 4.10 11 E2a_E3a KnownJunction 0 6.74 6.71 37.61 13.48 20.29 19.25 3.71 26.25 10.56 19.26 8.32 6.30 0.00 20.95 4.82 8.72 13.00 17.74 0.00 12.08 2.35 0.00 0.00 12 Ix Intron 0 17.83 7.61 5.13 3.80 11.27 7.72 6.81 4.82 4.31 4.80 5.43 0.00 16.26 5.54 5.35 8.34 10.81 15.05 4.47 7.96 6.19 6.82 2.75 13 Ix_AR1 ActiveIntronRegion 0 17.97 7.68 5.17 3.84 11.37 7.79 6.88 4.87 4.35 4.84 5.48 0.00 16.42 5.59 5.40 8.42 10.91 15.19 4.51 8.04 6.24 6.89 2.77 14 E3_Aa NovelBoundary 0 14.52 5.99 20.64 11.25 6.79 31.91 16.65 13.27 9.72 15.28 2.68 0.00 0.00 2.41 0.00 8.46 4.77 8.79 4.61 15.85 13.22 11.08 12.89 15 ER3a ExonRegion 0 23.85 19.84 49.79 29.64 42.24 37.96 25.34 40.35 20.36 36.07 17.88 15.75 7.52 30.20 27.69 31.75 13.40 46.26 28.28 32.92 14.32 17.33 7.54 16 E3_Da NovelBoundary 0 7.41 0.00 15.79 8.66 4.33 2.56 20.98 17.09 10.65 10.77 4.37 6.30 18.67 2.41 9.52 0.00 4.30 23.13 3.95 5.69 22.18 8.82 8.45 17 E3a_E4a KnownJunction 0 26.00 18.35 84.59 53.24 108.74 47.87 37.23 45.84 17.53 54.91 19.06 0.00 19.80 32.96 33.01 32.21 27.12 42.16 34.54 58.10 9.14 12.25 19.21 18 Ix Intron 0 10.67 7.54 8.12 5.12 10.71 4.35 16.29 11.46 9.00 6.59 7.16 4.98 4.01 3.20 4.38 6.17 3.43 4.90 2.83 7.89 9.79 4.94 6.97 19 Ix_SR1 SilentIntronRegion 0 12.87 7.66 8.72 5.95 12.67 5.21 18.03 12.40 10.15 7.38 7.41 6.12 2.24 3.44 5.33 6.43 3.95 4.41 1.39 7.79 9.28 4.75 6.59 20 E4_Aa NovelBoundary 0 14.22 9.21 23.15 5.56 18.25 8.69 27.16 14.62 13.77 6.29 0.00 7.65 0.00 2.47 0.00 4.19 8.32 2.53 0.00 6.52 0.00 17.08 11.78 21 ER4a ExonRegion 0 21.72 50.64 82.92 51.60 124.54 73.14 48.06 62.80 31.02 59.03 21.41 16.96 16.55 41.44 28.56 39.13 33.88 53.07 30.85 41.80 13.31 18.53 20.87 22 E4_Da NovelBoundary 0 14.00 6.18 6.48 13.02 12.56 0.00 16.83 23.49 9.52 8.35 2.63 5.55 0.00 2.12 0.00 4.36 13.09 0.00 12.33 8.69 5.93 11.57 4.10 23 E4a_E5a KnownJunction 0 34.82 40.91 64.90 40.19 156.28 70.87 28.35 42.63 24.33 51.68 15.00 19.36 6.82 47.27 44.38 40.93 16.27 58.57 30.21 22.69 14.58 6.25 15.19 24 E5_Aa NovelBoundary 0 9.56 0.00 10.79 4.63 7.89 5.22 7.77 20.00 10.94 3.95 0.00 0.00 0.00 0.00 0.00 0.00 4.68 4.89 4.80 5.62 16.99 2.82 7.09 25 ER5a ExonRegion 0 11.32 13.19 32.09 20.14 50.95 37.57 14.24 28.78 12.74 21.17 8.67 10.50 7.68 17.54 14.67 19.07 22.27 14.16 14.25 17.18 10.84 9.43 12.61 26 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 Ix Intron 0 7.29 5.21 12.84 8.78 10.97 6.11 8.89 10.19 7.18 7.06 4.84 5.23 2.14 5.33 6.97 10.66 9.21 15.26 7.25 9.45 7.15 4.39 8.61 28 Ix_SR1 SilentIntronRegion 0 17.14 8.06 5.83 10.11 4.97 5.19 12.00 7.22 5.04 7.65 5.59 4.82 2.79 4.16 8.68 11.45 4.71 8.85 12.92 6.37 6.63 7.89 10.16 29 Ix_SR2 SilentIntronRegion 0 7.29 5.64 14.12 9.28 11.99 6.85 8.34 10.99 7.95 7.52 4.88 5.14 2.28 5.52 7.32 11.05 8.93 17.72 6.98 10.36 7.11 4.17 8.66 30 Ix_AR2 ActiveIntronRegion 0 3.17 2.71 15.11 7.27 8.03 12.23 15.45 12.10 6.38 8.03 3.87 7.22 0.00 7.31 8.70 8.92 14.85 4.93 9.56 4.96 6.61 4.17 2.94 31 Ix_AR3 ActiveIntronRegion 0 2.83 1.98 10.80 6.28 9.60 3.08 9.82 8.27 4.97 4.85 4.38 6.03 1.35 5.02 4.68 8.77 12.70 8.18 5.81 7.33 7.85 3.59 8.15 32 ER6a ExonRegion 0 7.83 6.65 4.13 4.69 7.98 6.52 9.75 4.83 4.69 3.45 2.42 5.44 5.45 3.64 7.27 10.15 6.54 13.33 6.89 12.37 6.03 3.61 8.61