Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AC004980.3	Gene	0	10.45	36.48	58.57	54.19	65.86	42.76	47.26	48.21	37.13	36.64	14.64	16.81	12.13	17.96	25.79	24.13	22.63	40.54	37.19	33.04	59.14	54.53	97.47
2	418663	Transcript	0	6.49	21.21	21.66	21.31	38.24	28.28	27.32	24.89	19.25	17.20	4.91	8.37	5.52	6.94	14.73	12.10	8.62	22.03	21.24	17.44	27.75	25.91	53.08
3	450661	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	423084	Transcript	0	6.98	15.41	75.78	76.86	33.10	23.40	23.14	31.41	29.62	37.24	18.80	17.57	11.33	16.67	21.55	25.10	26.13	31.17	25.58	26.72	56.60	48.42	48.47
5	429707	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	2.12	0.00	1.23	0.68	4.01	11.00	3.31	0.00	1.85	2.87	0.00	0.00	0.00	0.00	8.70	5.94	0.00	11.09	6.37	6.38	3.31	1.04	4.40
7	ER1b	ExonRegion	0	11.98	7.85	13.50	8.59	24.83	60.99	31.09	3.18	8.00	9.45	7.69	0.00	0.00	9.87	12.77	17.65	11.82	36.47	18.03	20.43	46.85	23.96	21.97
8	E1_Ac	KnownBoundary	1	113.58	44.07	88.32	89.23	133.70	308.06	217.41	104.16	81.16	131.49	173.46	5.85	0.00	67.16	68.48	99.63	128.56	301.16	105.13	115.05	154.63	87.38	149.90
9	ER1c	ExonRegion	0	1.53	3.06	17.40	7.26	5.17	10.52	9.24	5.87	8.20	12.22	12.88	0.00	0.00	10.06	11.03	6.92	15.52	30.80	10.46	14.56	39.65	17.12	18.91
10	E1_Ad	KnownBoundary	1	25.86	20.13	74.66	65.79	11.29	60.02	14.40	104.45	35.94	99.79	89.02	5.70	0.00	63.16	47.84	93.99	87.14	220.03	71.63	61.74	58.56	48.56	71.62
11	ER1d	ExonRegion	0	1.34	2.35	17.09	7.60	3.52	8.88	4.46	7.87	5.10	11.68	4.73	0.00	0.00	6.80	14.35	8.45	31.27	37.15	10.73	10.75	8.18	9.38	9.58
12	E1_Da	KnownBoundary	0	0.00	2.89	15.08	2.06	3.74	2.90	6.09	6.61	1.71	4.38	2.05	0.00	0.00	0.00	0.00	4.02	24.40	16.83	0.00	5.94	5.99	0.00	4.35
13	E1a_E2c	KnownJunction	0	0.00	0.00	1.83	0.00	0.00	0.00	0.00	2.46	0.00	0.00	0.00	0.00	0.00	2.65	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00	0.00
14	ER1e	ExonRegion	0	5.82	9.21	32.61	24.01	13.59	30.23	21.28	18.13	13.03	18.40	17.85	1.84	0.98	18.16	20.93	15.07	22.75	35.67	22.60	20.17	45.18	20.98	39.15
15	E1b_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E1c_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1f	ExonRegion	0	2.12	2.03	17.97	14.08	2.68	3.67	5.30	17.86	11.94	18.35	5.80	4.33	0.00	9.74	2.90	14.86	13.20	36.34	12.74	19.15	40.40	23.61	23.49
18	ER2a	ExonRegion	0	2.31	1.34	27.91	28.99	3.77	8.88	4.39	20.07	13.11	20.54	15.51	3.64	0.00	19.53	16.09	18.98	18.38	36.58	29.10	17.36	58.20	29.50	39.64
19	E2_Ab	KnownBoundary	0	0.00	0.00	17.21	13.75	0.00	0.00	0.00	14.50	10.27	9.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.46	0.00	0.00	0.00	0.00	0.00
20	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2b	ExonRegion	1	8.47	6.10	34.31	40.89	2.68	20.17	15.89	20.74	12.35	25.23	25.13	0.00	0.00	35.73	34.82	14.86	19.81	29.56	31.85	19.15	70.52	39.59	46.99
22	ER2c	ExonRegion	0	7.79	11.33	35.30	39.79	10.99	35.73	29.60	29.14	15.84	27.08	22.19	4.25	0.92	34.74	32.54	12.90	21.63	21.28	13.20	23.10	68.20	40.22	55.11
23	E2b_E3a	KnownJunction	0	0.00	0.00	40.30	34.16	3.99	17.04	10.86	15.73	13.11	26.67	12.53	6.30	6.01	5.47	0.00	4.02	4.39	6.80	0.00	6.07	18.41	18.00	4.18
24	E2b_E4a	NovelJunction	0	3.78	5.92	1.33	0.00	0.00	5.79	2.21	2.38	5.93	1.67	0.00	0.00	0.00	2.47	0.00	0.00	0.00	5.06	0.00	0.00	0.00	0.00	12.98
25	E2b_E5a	KnownJunction	0	0.00	8.81	3.61	5.13	12.22	8.69	23.36	20.74	8.42	8.03	0.00	0.00	0.00	4.89	0.00	4.36	0.00	10.49	3.67	3.26	13.22	20.82	16.30
26	ER2d	ExonRegion	0	3.17	24.40	85.16	72.91	37.46	58.68	56.27	59.63	47.55	55.62	20.30	34.64	23.45	16.24	31.91	16.35	19.81	38.80	33.45	38.30	79.33	68.76	92.50
27	I2	Intron	0	6.28	14.13	22.23	25.67	18.96	8.27	29.39	17.39	12.62	12.17	4.56	26.51	31.29	6.47	10.09	14.18	16.24	14.06	11.74	26.22	12.71	9.37	31.71
28	I2_AR1	ActiveIntronRegion	1	7.82	28.95	30.52	45.91	30.41	11.32	51.68	24.45	12.41	15.64	3.94	26.92	33.38	3.67	18.47	12.11	16.25	5.57	11.36	25.71	5.01	9.66	32.25
29	I2_SR1	SilentIntronRegion	1	5.54	13.39	13.56	20.16	15.66	8.71	40.04	14.15	10.52	10.05	4.37	36.98	46.51	6.17	9.40	13.29	18.51	5.85	8.78	28.94	8.02	7.12	24.82
30	I2_AR2	ActiveIntronRegion	1	1.06	3.97	15.09	6.63	3.65	0.00	13.84	13.51	8.76	16.37	8.79	15.94	39.01	8.19	0.00	7.16	39.31	10.16	7.67	47.20	22.24	1.23	32.70
31	I2_AR3	ActiveIntronRegion	0	0.44	4.19	8.12	9.16	4.52	1.91	15.39	7.98	6.02	4.30	6.48	31.85	47.72	9.33	2.32	15.62	28.43	10.13	5.62	38.71	10.35	5.76	23.24
32	I2_SR2	SilentIntronRegion	0	1.24	2.38	5.84	5.92	3.07	1.67	10.22	4.17	4.60	2.50	3.09	28.95	27.06	4.49	1.45	5.47	12.82	2.49	3.41	17.22	5.27	2.09	7.26
33	I2_AR5	ActiveIntronRegion	0	0.58	1.12	4.46	4.44	4.41	1.81	9.06	2.63	2.34	1.63	3.40	13.58	12.01	5.41	1.91	11.11	21.94	5.35	2.52	14.78	7.99	1.37	6.65
34	I2_AR7	ActiveIntronRegion	1	0.00	0.00	3.94	3.60	0.00	0.00	6.05	0.00	1.24	1.15	2.62	32.78	14.07	6.50	0.00	2.12	3.30	0.00	4.78	9.42	2.20	0.60	6.50
35	I2_AR8	ActiveIntronRegion	0	0.00	0.00	7.00	4.09	0.00	0.00	7.94	0.00	1.24	1.15	3.87	35.87	16.75	8.82	0.00	3.82	5.19	0.00	6.37	15.20	2.20	2.08	10.91
36	I2_AR9	ActiveIntronRegion	1	0.00	0.00	7.35	4.09	0.00	0.00	7.94	0.00	2.47	1.15	3.87	43.29	37.52	9.74	0.00	5.94	6.60	0.00	6.37	17.02	2.20	2.78	11.75
37	I2_AR10	ActiveIntronRegion	1	0.63	0.00	11.03	5.04	0.00	0.00	9.80	0.00	2.47	1.15	3.87	39.83	42.68	4.06	0.00	5.94	8.91	0.00	6.37	18.30	2.20	6.25	11.75
38	I2_AR11	ActiveIntronRegion	0	2.12	0.00	16.91	5.45	0.00	0.00	9.80	0.00	4.45	1.15	3.09	32.47	48.78	4.87	2.32	5.94	6.60	0.00	3.19	17.66	0.66	6.46	12.33
39	I2_SR3	SilentIntronRegion	0	0.95	1.94	7.38	9.72	4.94	1.98	13.93	4.44	3.44	2.65	3.06	30.95	47.72	5.80	1.37	5.72	10.72	1.14	2.19	19.76	3.37	3.03	6.85
40	I2_AR12	ActiveIntronRegion	0	1.07	2.34	6.99	8.44	6.39	1.01	10.95	3.65	3.51	1.29	1.77	23.57	28.91	4.81	2.71	4.71	9.20	2.59	4.48	15.27	2.77	3.12	9.50
41	I2_SR4	SilentIntronRegion	1	1.25	9.46	19.64	11.18	6.83	2.17	19.10	5.08	1.07	2.52	3.56	41.29	35.67	4.47	3.34	8.33	19.36	3.79	2.61	20.84	4.26	1.99	12.79
42	I2_AR13	ActiveIntronRegion	1	1.89	3.91	15.35	20.17	4.57	1.11	12.72	8.36	4.25	4.52	1.08	37.03	43.35	3.97	3.04	3.23	5.92	1.71	3.56	16.34	1.08	3.10	8.17
43	I2_AR14	ActiveIntronRegion	1	6.09	2.40	10.73	18.34	4.30	0.00	17.69	12.20	3.67	6.29	1.87	28.86	44.20	10.09	5.45	0.54	0.00	0.56	1.25	20.31	1.34	6.12	9.79
44	I2_SR5	SilentIntronRegion	0	3.52	5.21	13.31	17.27	9.30	4.12	19.32	9.67	5.60	5.51	2.45	24.93	34.22	3.33	4.41	4.64	11.55	3.50	6.83	22.18	3.51	3.62	11.04
45	I2_AR15	ActiveIntronRegion	0	0.78	8.15	11.88	14.24	6.68	2.35	22.73	4.83	5.56	3.49	1.98	21.44	19.54	3.22	1.02	2.16	5.65	3.05	4.47	18.76	1.61	1.77	7.79
46	I2_SR6	SilentIntronRegion	0	1.40	7.28	7.72	11.56	7.45	3.53	21.36	7.82	7.87	3.63	3.02	29.86	24.22	5.55	2.52	7.33	10.56	5.87	5.54	17.67	4.18	3.25	13.99
47	I2_AR16	ActiveIntronRegion	0	4.04	5.26	13.02	17.29	7.92	2.38	12.69	11.98	6.35	4.66	5.86	13.61	10.41	8.45	2.61	17.47	17.73	16.09	5.95	17.99	15.02	3.31	19.26
48	I2_AR18	ActiveIntronRegion	0	4.45	10.16	8.72	16.01	12.51	4.82	28.04	15.15	11.50	5.61	2.45	19.12	20.67	9.04	5.82	7.22	12.82	7.19	13.03	25.00	9.27	2.41	20.84
49	I2_AR19	ActiveIntronRegion	0	4.54	22.36	17.15	28.03	22.83	2.70	35.25	26.61	17.97	13.32	1.77	24.75	26.29	5.43	6.72	8.65	13.90	3.11	5.27	23.50	5.38	7.54	17.79
50	I2_SR9	SilentIntronRegion	0	11.81	28.62	29.68	38.26	36.59	13.86	41.16	25.83	19.69	17.32	5.48	15.90	23.24	9.10	11.72	18.50	15.65	13.64	16.51	23.46	8.71	14.76	37.53
51	I2_AR20	ActiveIntronRegion	0	8.75	17.17	51.07	55.10	47.04	8.72	23.47	24.98	17.13	17.62	3.08	14.19	3.42	6.48	6.75	3.94	7.14	7.96	9.15	20.71	4.04	12.39	21.40
52	I2_SR10	SilentIntronRegion	1	21.05	30.76	87.18	74.02	72.90	32.34	48.79	59.96	41.96	47.52	10.59	17.38	26.02	11.86	38.05	40.89	33.44	69.52	46.08	50.21	59.39	33.39	130.14
53	I2_AR21	ActiveIntronRegion	1	58.20	30.79	96.54	94.43	72.63	30.39	52.86	71.11	57.17	47.02	17.81	4.33	14.07	11.95	49.32	57.32	56.12	123.40	63.48	60.79	77.13	35.27	188.15
54	I2_SR11	SilentIntronRegion	1	26.87	36.15	57.63	61.77	38.72	19.06	33.47	37.92	29.34	27.22	8.32	12.62	21.38	10.32	36.95	48.19	18.75	64.95	37.95	44.50	42.88	28.91	121.25
55	I2_AR22	ActiveIntronRegion	1	18.46	46.86	90.09	82.09	54.71	20.53	55.82	57.88	35.21	45.22	12.79	11.42	13.76	10.25	42.47	41.65	19.91	78.22	39.11	61.46	58.41	31.50	126.11
56	I2_AR23	ActiveIntronRegion	0	22.33	35.36	108.15	90.43	32.37	30.35	38.57	46.11	44.70	44.40	15.40	21.65	8.62	11.79	38.28	51.48	24.38	99.60	40.38	73.99	75.57	27.02	140.39
57	I2_AR24	ActiveIntronRegion	0	37.60	28.95	104.59	85.86	30.54	26.54	39.95	57.75	47.52	51.95	12.28	11.21	3.86	13.18	37.89	62.41	38.64	109.23	41.60	60.58	70.78	47.31	168.25
58	I2_SR12	SilentIntronRegion	1	43.38	62.65	82.82	71.71	57.24	28.20	56.66	53.59	35.61	45.13	14.40	19.34	23.90	10.41	41.08	59.79	31.08	74.09	47.97	64.58	86.33	58.98	164.74
59	I2_AR25	ActiveIntronRegion	1	15.61	50.08	103.08	102.90	69.90	16.50	35.42	73.24	55.27	57.49	14.74	12.99	38.11	9.74	56.21	55.36	24.76	114.56	29.86	68.35	71.07	44.27	123.71
60	I2_AR26	ActiveIntronRegion	0	14.78	36.39	110.01	97.13	58.00	32.62	52.20	72.64	57.38	62.07	19.68	16.23	27.52	13.90	43.56	59.19	45.07	120.81	58.45	63.88	84.40	49.41	150.03
61	I2_SR13	SilentIntronRegion	0	20.00	30.05	79.02	78.98	47.26	33.20	39.41	56.59	46.25	67.54	10.60	18.86	20.03	21.66	42.68	48.05	38.84	64.05	49.30	73.43	74.39	43.52	115.46
62	Ix	Intron	0	5.75	19.63	35.26	37.50	28.84	15.99	22.71	26.31	16.91	20.35	5.26	5.44	6.39	4.23	13.62	22.84	8.97	37.46	16.13	16.55	13.83	13.08	56.71
63	Ix_SR1	SilentIntronRegion	0	5.78	19.71	35.38	37.63	28.95	16.05	22.80	26.41	16.97	20.42	5.27	5.46	6.41	4.25	13.67	22.93	9.00	37.60	16.18	16.61	13.87	13.13	56.92
64	Ix	Intron	0	13.36	17.29	12.03	16.89	35.74	12.80	15.71	46.60	17.94	9.08	1.64	2.14	2.66	5.34	15.20	14.80	10.02	45.53	23.40	6.98	7.49	8.86	68.91
65	Ix_SR1	SilentIntronRegion	0	13.37	17.30	12.04	16.90	35.76	12.81	15.72	46.63	17.95	9.08	1.64	2.14	2.66	5.34	15.20	14.81	10.03	45.56	23.41	6.98	7.50	8.86	68.95
66	E3_Aa	NovelBoundary	0	10.08	57.49	163.00	140.51	68.00	46.05	115.53	71.55	61.28	57.91	12.48	12.60	13.64	25.90	8.90	60.92	52.92	74.37	62.31	52.28	85.31	27.43	121.90
67	ER3a	ExonRegion	0	16.67	36.31	120.36	128.07	77.63	45.41	56.81	57.17	49.48	77.24	37.29	37.59	34.54	33.28	55.72	52.50	55.40	76.18	60.00	76.97	109.45	100.87	122.73
68	E3_Da	NovelBoundary	0	13.48	58.15	172.85	166.21	121.22	30.04	107.76	78.45	54.98	58.40	18.85	37.06	46.10	15.01	36.84	57.42	50.58	84.44	96.76	90.19	113.24	33.56	138.97
69	E3a_E4a	KnownJunction	0	3.33	3.35	73.80	93.66	11.29	13.91	8.48	22.14	28.93	26.59	11.63	19.21	0.00	10.95	15.45	15.55	25.43	6.63	7.91	6.39	72.96	51.80	13.06
70	E3a_E5a	NovelJunction	0	0.00	3.35	3.34	8.36	0.00	5.79	1.85	5.09	4.31	4.11	2.47	0.00	0.00	0.00	0.00	0.00	0.00	1.99	8.66	0.00	14.33	19.41	8.02
71	Ix	Intron	0	15.78	39.05	54.21	52.92	80.68	31.69	44.29	32.29	26.11	32.14	13.78	12.01	15.44	10.11	19.39	41.38	22.22	37.64	33.00	25.83	38.81	35.33	83.51
72	Ix_SR1	SilentIntronRegion	0	22.72	75.87	78.42	88.29	140.03	46.26	81.37	51.15	31.12	40.38	14.53	25.16	26.66	14.13	28.45	41.48	27.47	38.96	26.51	35.98	25.42	44.74	107.99
73	Ix_AR1	ActiveIntronRegion	0	12.34	28.45	41.56	49.17	53.04	25.12	30.49	24.09	20.96	34.89	14.09	11.06	11.50	10.27	10.99	38.11	21.16	25.45	31.56	22.32	55.85	33.40	48.87
74	Ix_AR2	ActiveIntronRegion	0	9.23	27.96	54.43	57.15	77.21	30.76	51.99	25.84	28.33	30.92	20.74	12.30	12.96	7.79	17.37	52.85	24.39	54.20	44.89	31.41	53.95	57.32	109.18
75	Ix_SR2	SilentIntronRegion	0	17.00	25.73	45.10	26.91	58.02	26.14	21.80	27.93	24.76	25.05	8.93	2.76	11.36	8.46	19.74	37.00	17.90	35.42	31.98	17.52	28.32	16.73	74.29
76	E4_Aa	NovelBoundary	0	37.56	73.34	94.47	100.35	133.87	90.06	60.99	49.41	48.06	42.15	21.16	6.30	12.17	14.30	16.81	72.29	52.27	96.46	32.75	34.58	70.24	61.85	190.10
77	ER4a	ExonRegion	0	14.92	37.39	142.61	128.43	72.57	40.65	39.54	59.57	56.57	55.69	32.55	24.77	16.11	31.00	36.60	53.44	45.41	64.49	59.97	44.16	82.17	71.43	102.38
78	E4_Da	NovelBoundary	0	0.00	51.83	181.63	165.78	117.15	91.54	65.93	61.12	50.93	62.75	26.11	24.31	20.45	15.13	17.80	26.49	20.57	39.92	36.71	47.30	54.36	61.48	62.32
79	Ix	Intron	0	7.12	14.55	18.76	20.24	42.38	16.04	23.56	15.75	11.71	14.63	5.68	10.50	4.30	6.47	10.15	10.54	8.07	13.26	21.04	14.83	19.53	22.55	64.28
80	Ix_SR1	SilentIntronRegion	0	7.14	14.58	18.80	20.29	42.48	16.07	23.61	15.79	11.73	14.67	5.69	10.52	4.31	6.49	10.18	10.56	8.09	13.29	21.08	14.87	19.57	22.60	64.43
81	Ix	Intron	0	15.49	35.45	7.86	25.79	55.29	18.94	35.61	47.67	16.63	3.68	0.42	5.32	3.21	5.61	14.25	8.31	5.68	16.63	17.14	11.45	15.65	17.49	60.67
82	Ix_AR1	ActiveIntronRegion	0	15.62	35.74	7.93	26.00	55.76	19.10	35.92	48.07	16.78	3.71	0.42	5.36	3.23	5.66	14.37	8.37	5.73	16.77	17.28	11.53	15.78	17.63	61.17
83	E5_Aa	NovelBoundary	0	16.89	105.97	184.06	94.66	214.52	81.15	206.20	110.57	80.84	44.40	21.43	18.46	45.94	30.96	48.46	28.03	43.95	39.80	52.99	81.43	40.83	81.01	130.52
84	ER5a	ExonRegion	0	12.20	58.89	100.75	82.17	118.15	62.32	81.37	86.75	63.25	61.71	13.22	27.25	23.32	24.23	42.00	36.56	20.95	54.41	48.47	51.21	76.08	92.98	174.59
85	E5_Da	KnownBoundary	0	36.97	130.44	107.42	133.92	349.41	138.67	235.52	142.86	104.95	92.94	12.42	23.86	50.65	21.66	52.17	35.29	30.29	68.81	75.20	67.50	96.81	159.57	311.49
86	ER5b	ExonRegion	0	10.86	42.42	42.09	41.95	72.46	45.56	51.34	49.79	36.64	31.54	9.82	16.74	11.04	13.89	20.75	18.25	17.23	32.97	36.11	28.49	52.19	50.78	101.75