Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LMTK2 Gene 0 25.76 49.27 43.83 53.84 52.71 52.28 58.91 54.97 59.93 65.68 41.14 36.83 44.57 52.36 39.42 32.91 51.30 83.70 48.08 73.07 19.35 33.23 31.01 2 297293 Transcript 0 9.36 21.74 18.22 24.58 25.14 31.84 40.16 31.87 43.37 48.96 40.60 33.51 38.29 53.51 31.54 32.27 51.22 79.51 49.39 71.61 19.70 28.57 27.49 3 493372 Transcript 0 0.56 1.34 2.19 0.54 2.12 0.00 1.22 1.36 0.49 0.01 0.00 0.94 0.00 0.53 0.32 0.81 0.03 0.64 0.42 0.84 0.00 0.00 0.78 4 ER1a ExonRegion 0 0.94 1.45 2.31 2.32 1.41 5.18 6.02 2.65 5.60 6.98 7.94 0.46 5.95 12.36 13.25 3.49 13.93 13.35 7.40 16.92 4.34 4.22 6.71 5 E1a_E3a KnownJunction 0 3.48 12.70 4.58 15.05 0.00 5.05 22.61 14.13 19.07 22.78 19.43 0.00 6.82 36.55 20.15 8.29 17.20 47.30 16.75 26.27 5.68 14.39 11.44 6 I1_AR5 ActiveIntronRegion 0 5.62 4.07 6.83 8.70 5.35 0.07 9.52 3.46 7.70 4.68 0.30 14.15 5.23 0.00 0.00 1.49 0.00 1.85 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 1.12 2.69 4.39 1.07 4.24 0.00 2.45 2.72 0.97 0.02 0.00 1.88 0.00 1.05 0.65 1.62 0.05 1.28 0.84 1.69 0.00 0.00 1.55 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 0 3.57 18.60 10.65 19.19 15.59 12.56 43.42 28.80 34.81 28.70 44.15 29.90 30.45 41.82 28.26 31.53 43.71 70.89 60.30 55.70 9.71 26.84 21.66 10 E3a_E4a KnownJunction 0 6.82 30.78 19.90 18.71 29.20 35.09 55.82 37.25 41.23 48.67 68.60 36.76 28.24 43.91 23.24 35.63 82.94 66.49 35.11 68.26 12.60 32.33 36.11 11 ER4a ExonRegion 0 12.74 24.39 18.49 26.22 22.79 28.49 46.18 27.51 41.70 47.73 45.18 61.30 42.40 58.00 31.65 43.66 68.20 80.82 64.56 70.87 13.19 33.52 33.50 12 E4a_E5a KnownJunction 0 0.00 30.85 11.80 25.24 16.64 28.79 61.74 25.14 39.67 46.69 50.43 59.42 74.02 52.68 33.75 55.54 72.56 77.89 77.08 72.48 30.46 26.45 28.17 13 E5_Aa NovelBoundary 0 0.00 0.00 1.66 2.66 26.83 0.00 17.62 0.00 2.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 2.88 4.35 14 ER5a ExonRegion 1 5.92 17.84 12.09 21.60 25.96 13.03 52.74 23.36 36.50 46.79 31.63 84.72 63.19 51.09 26.07 32.17 74.09 58.98 61.94 69.03 17.99 37.08 30.64 15 E5a_E6a KnownJunction 1 14.74 23.81 18.80 22.84 11.71 17.94 65.71 22.26 36.40 37.23 29.17 68.42 40.74 55.68 39.56 33.07 64.14 61.60 72.94 40.08 8.59 48.99 54.21 16 ER6a ExonRegion 0 4.62 34.04 11.66 22.44 42.34 39.62 67.37 29.75 42.24 38.59 37.02 55.88 56.44 56.28 32.94 35.89 54.59 69.28 56.37 85.28 25.44 28.82 37.76 17 E6a_E7a KnownJunction 1 5.93 37.69 11.35 27.57 30.90 48.49 83.47 40.38 41.35 44.32 41.12 93.03 79.38 38.79 41.54 32.81 74.61 67.44 69.18 114.22 23.35 48.37 15.28 18 ER7a ExonRegion 0 9.07 21.24 7.87 18.99 25.45 30.13 55.32 30.01 34.56 34.63 39.03 43.20 35.44 46.88 32.21 20.70 61.14 68.72 51.91 89.29 22.64 24.77 24.99 19 E7a_E8a KnownJunction 1 6.59 33.42 9.70 12.82 21.56 13.51 34.09 26.74 35.76 35.48 33.69 11.55 60.06 43.20 32.14 7.60 48.71 41.04 50.26 64.11 16.37 5.08 31.24 20 ER8a ExonRegion 0 3.87 17.70 4.44 11.92 22.62 17.15 29.35 16.29 26.60 31.12 29.67 40.71 34.83 43.45 30.68 19.50 48.38 68.71 34.80 74.69 19.54 22.62 20.93 21 E8_Da NovelBoundary 0 3.41 5.13 6.68 6.83 0.00 0.00 4.50 9.36 3.36 11.26 2.05 6.30 6.82 3.00 4.45 8.12 12.53 17.53 0.00 18.41 0.00 0.00 11.52 22 E8a_E9a KnownJunction 0 0.00 23.55 1.69 3.03 20.63 10.22 27.25 11.99 26.07 32.50 26.48 51.62 20.29 52.15 25.59 25.63 39.55 69.89 38.78 61.17 18.53 32.15 7.60 23 E9_Aa NovelBoundary 0 19.93 8.62 6.42 32.56 15.45 5.45 10.29 16.76 9.03 6.07 4.53 6.60 25.81 2.47 10.26 10.60 4.02 0.00 4.80 27.10 5.31 8.21 4.10 24 ER9a ExonRegion 0 9.29 17.87 6.98 8.15 33.21 36.55 43.68 15.27 23.42 44.61 40.11 43.70 31.95 65.60 26.69 27.97 39.07 75.37 47.03 66.31 11.85 28.46 14.13 25 E9_Da NovelBoundary 1 0.00 17.83 3.08 6.93 4.33 0.00 8.44 8.30 2.26 6.47 2.58 6.30 26.62 2.47 0.00 0.00 13.56 5.10 0.00 10.48 3.15 0.00 3.93 26 E9a_E10a KnownJunction 0 11.93 5.33 8.96 14.58 45.25 25.16 47.83 18.24 28.99 58.16 53.28 19.66 40.58 62.10 33.62 25.98 72.56 57.87 33.13 84.63 19.71 28.35 18.44 27 I9 Intron 0 11.42 6.37 4.24 10.25 8.23 3.08 15.52 5.98 3.95 4.46 2.24 2.81 7.91 2.16 2.69 2.76 2.11 6.56 4.44 6.91 1.15 3.02 3.07 28 I9_SR1 SilentIntronRegion 0 11.45 6.39 4.25 10.28 8.25 3.09 15.55 5.99 3.96 4.47 2.25 2.81 7.93 2.16 2.70 2.77 2.11 6.58 4.45 6.93 1.15 3.03 3.07 29 E10_Aa NovelBoundary 0 0.00 12.50 1.54 12.09 0.00 10.62 32.59 9.82 6.25 8.41 2.63 0.00 0.00 7.12 0.00 0.00 9.07 4.19 4.14 8.31 0.00 2.51 12.55 30 ER10a ExonRegion 0 12.44 22.27 15.99 15.10 24.13 31.16 42.86 26.90 41.08 50.95 45.38 49.54 55.20 59.17 25.09 43.68 56.06 92.28 34.96 85.98 15.50 28.23 16.08 31 E10a_E11a KnownJunction 0 11.93 14.47 17.83 7.26 22.75 27.37 38.77 47.40 38.95 55.87 42.38 24.01 56.65 52.09 19.53 45.29 47.87 44.23 67.11 88.91 10.69 27.49 15.62 32 E11_Aa NovelBoundary 0 3.04 13.62 11.62 11.12 17.74 7.89 33.96 5.67 18.72 9.37 9.21 6.30 18.99 0.00 11.00 19.14 12.62 7.17 0.00 16.68 9.45 14.88 7.34 33 ER11a ExonRegion 0 11.73 23.21 18.85 21.51 23.12 32.94 45.26 31.09 62.51 54.99 43.52 41.74 62.31 54.77 34.35 45.75 65.29 86.56 62.52 106.95 25.20 27.99 37.73 34 E11a_E12a KnownJunction 0 2.96 21.51 13.36 13.98 23.01 31.69 28.57 37.91 64.15 43.44 52.43 42.61 41.23 33.55 20.52 37.85 59.19 93.02 47.72 85.65 23.66 17.82 46.18 35 ER12a ExonRegion 0 14.60 29.91 28.36 37.84 28.54 45.98 54.73 52.81 67.07 74.33 52.32 51.13 75.71 68.54 36.88 43.89 72.77 118.48 65.00 93.60 28.45 40.83 41.52 36 E12a_E13a KnownJunction 1 0.00 0.00 32.08 54.44 16.81 29.53 35.20 54.14 51.48 93.05 38.43 0.00 14.93 61.63 10.75 45.63 58.06 168.18 61.27 72.03 30.15 27.25 30.90 37 ER13a ExonRegion 0 4.34 6.51 25.59 31.72 9.90 31.08 13.66 34.37 51.87 61.99 47.65 12.92 21.72 58.42 30.41 31.93 57.26 107.36 46.22 62.13 27.17 25.10 26.72 38 E13a_E14a KnownJunction 0 14.08 23.81 41.87 61.33 20.12 61.73 26.76 54.46 79.66 86.95 80.18 29.26 28.57 106.01 66.88 86.47 44.41 143.97 130.36 108.02 39.91 77.58 67.35 39 E14_Aa NovelBoundary 0 10.37 2.70 7.42 6.19 11.29 0.00 8.04 4.19 9.29 3.30 0.00 0.00 0.00 2.47 0.00 8.29 16.08 2.20 18.45 6.46 2.29 0.00 4.18 40 ER14a ExonRegion 0 8.96 13.37 27.86 37.67 14.37 40.63 26.70 29.16 51.65 54.24 55.24 12.95 21.71 62.42 34.36 37.32 47.39 99.08 43.35 49.27 24.33 26.94 32.65 41 E14a_E15a KnownJunction 0 11.19 14.41 20.67 17.28 27.93 48.10 12.50 31.75 57.12 40.16 41.17 13.80 21.91 61.45 38.32 22.47 44.04 85.68 8.28 32.47 17.24 9.19 19.12 42 ER15a ExonRegion 0 43.22 79.94 69.95 82.98 87.37 71.33 75.92 73.35 68.62 74.81 37.51 30.93 29.91 46.16 48.42 28.74 40.67 69.82 41.27 67.35 15.02 33.95 28.26