Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	POMZP3	Gene	0	12.98	24.73	27.23	60.16	28.43	36.09	36.02	45.05	22.58	14.24	28.21	20.96	15.28	21.87	28.32	21.65	16.64	69.68	30.35	40.91	26.57	14.25	34.19
2	424818	Transcript	0	0.00	4.57	9.09	12.92	1.95	4.29	0.00	9.61	1.20	5.47	4.63	3.15	0.00	2.24	2.23	0.00	1.73	7.25	2.07	6.90	8.65	4.59	6.10
3	310842	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	275569	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	454397	Transcript	1	26.83	39.89	42.60	42.93	63.70	35.00	51.01	37.67	22.01	26.71	10.54	35.38	45.59	35.66	48.16	52.19	40.20	66.47	45.21	58.73	38.53	28.62	86.07
6	441393	Transcript	0	4.15	10.03	0.18	0.52	14.64	4.41	11.90	16.14	4.34	0.08	0.21	0.41	1.90	1.60	4.67	2.97	0.22	18.08	4.09	0.35	2.77	0.00	22.54
7	454656	Transcript	0	0.58	0.58	0.01	0.00	0.00	1.01	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.56	0.00	0.91	0.00	0.00	1.18	0.00	2.04	2.07
8	464724	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00
10	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.13	0.00	0.00	0.00
11	ER1c	ExonRegion	0	1.85	2.32	2.73	2.85	2.42	10.85	8.05	2.85	1.64	0.83	0.44	0.51	0.47	1.34	0.13	0.75	0.00	4.27	0.32	2.06	1.21	0.58	0.31
12	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	1	21.00	22.26	30.39	72.40	3.94	35.15	27.12	56.94	33.15	16.17	11.99	23.20	14.60	34.09	39.51	26.21	4.01	108.35	73.84	33.71	13.79	14.47	30.36
14	E2_Ab	KnownBoundary	0	97.80	191.81	402.23	379.74	236.33	373.31	302.29	447.21	421.29	513.79	814.79	295.75	327.58	455.71	285.68	540.80	671.90	761.00	650.37	684.30	482.11	384.00	409.40
15	ER2b	ExonRegion	0	20.50	34.19	31.07	105.68	19.72	57.87	51.75	69.34	47.63	21.41	55.93	14.52	7.20	35.55	20.01	8.07	22.17	111.33	45.47	67.55	51.29	11.80	14.91
16	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	Ix	Intron	0	15.49	35.45	7.86	25.79	55.29	18.94	35.61	47.67	16.63	3.68	0.42	5.32	3.21	5.61	14.25	8.31	5.68	16.63	17.14	11.45	15.65	17.49	60.67
18	Ix_AR1	ActiveIntronRegion	0	15.62	35.74	7.93	26.00	55.76	19.10	35.92	48.07	16.78	3.71	0.42	5.36	3.23	5.66	14.37	8.37	5.73	16.77	17.28	11.53	15.78	17.63	61.17
19	E3_Aa	NovelBoundary	0	16.30	91.23	105.23	97.62	184.13	59.23	96.67	110.78	58.54	61.30	12.27	24.46	20.13	17.01	14.09	7.69	26.18	32.13	40.47	59.25	42.87	68.52	83.74
20	ER3a	ExonRegion	0	20.67	58.50	57.33	186.43	75.53	103.76	107.96	112.79	66.56	26.12	129.98	56.42	39.84	53.28	65.62	44.60	39.67	179.61	88.91	132.69	98.39	42.66	59.28
21	E3a_E4a	KnownJunction	0	0.00	7.96	13.60	19.05	29.71	5.34	12.54	34.58	8.71	5.59	12.11	12.60	0.00	15.30	30.41	16.15	0.00	25.74	8.66	12.21	12.29	23.88	7.34
22	E3a_E4b	KnownJunction	0	3.78	37.82	30.34	175.40	72.67	98.58	72.12	76.19	39.38	13.51	139.46	64.07	40.74	38.26	23.98	30.68	25.43	118.81	39.72	143.43	65.61	5.27	15.45
23	Ix	Intron	0	7.12	14.55	18.76	20.24	42.38	16.04	23.56	15.75	11.71	14.63	5.68	10.50	4.30	6.47	10.15	10.54	8.07	13.26	21.04	14.83	19.53	22.55	64.28
24	Ix_SR1	SilentIntronRegion	0	7.14	14.58	18.80	20.29	42.48	16.07	23.61	15.79	11.73	14.67	5.69	10.52	4.31	6.49	10.18	10.56	8.09	13.29	21.08	14.87	19.57	22.60	64.43
25	Ix	Intron	0	15.78	39.05	54.21	52.92	80.68	31.69	44.29	32.29	26.11	32.14	13.78	12.01	15.44	10.11	19.39	41.38	22.22	37.64	33.00	25.83	38.81	35.33	83.51
26	Ix_SR2	SilentIntronRegion	0	17.00	25.73	45.10	26.91	58.02	26.14	21.80	27.93	24.76	25.05	8.93	2.76	11.36	8.46	19.74	37.00	17.90	35.42	31.98	17.52	28.32	16.73	74.29
27	Ix_AR2	ActiveIntronRegion	0	9.23	27.96	54.43	57.15	77.21	30.76	51.99	25.84	28.33	30.92	20.74	12.30	12.96	7.79	17.37	52.85	24.39	54.20	44.89	31.41	53.95	57.32	109.18
28	Ix_AR1	ActiveIntronRegion	0	12.34	28.45	41.56	49.17	53.04	25.12	30.49	24.09	20.96	34.89	14.09	11.06	11.50	10.27	10.99	38.11	21.16	25.45	31.56	22.32	55.85	33.40	48.87
29	Ix_SR1	SilentIntronRegion	0	22.72	75.87	78.42	88.29	140.03	46.26	81.37	51.15	31.12	40.38	14.53	25.16	26.66	14.13	28.45	41.48	27.47	38.96	26.51	35.98	25.42	44.74	107.99
30	E4_Aa	NovelBoundary	1	30.67	54.46	105.26	109.18	50.51	2.38	70.35	66.38	67.16	44.13	0.00	26.56	18.02	29.49	23.73	21.02	31.23	39.38	13.18	48.13	31.20	69.19	56.77
31	ER4a	ExonRegion	1	25.79	51.85	63.18	92.91	57.56	38.62	41.85	52.91	30.30	42.58	29.85	45.84	40.48	39.54	55.81	34.19	46.99	72.00	32.79	55.48	64.41	47.33	113.54
32	E4_Da	KnownBoundary	1	5.85	17.43	68.12	75.08	52.72	7.78	12.19	59.93	21.90	30.35	2.68	12.00	27.76	14.13	45.74	31.53	20.10	57.95	25.22	25.31	19.65	35.39	106.70
33	E4a_E4b	KnownJunction	0	0.00	9.14	18.18	25.84	3.90	8.57	0.00	19.22	2.40	10.93	9.27	6.30	0.00	4.47	4.45	0.00	3.46	14.51	4.14	12.27	17.30	9.19	12.21
34	ER4b	ExonRegion	1	26.83	39.89	42.60	42.93	63.70	35.00	51.01	37.67	22.01	26.71	10.54	35.38	45.59	35.66	48.16	52.19	40.20	66.47	45.21	58.73	38.53	28.62	86.07
35	E4_Ab	KnownBoundary	0	14.89	38.81	84.30	50.84	31.49	47.02	47.47	42.59	27.11	32.05	7.00	5.55	8.28	9.77	24.60	35.89	25.62	84.07	26.73	31.51	41.21	36.19	66.07
36	ER4c	ExonRegion	0	15.45	39.77	62.29	156.99	39.31	74.46	74.15	91.67	38.93	23.11	82.59	48.44	30.59	38.95	47.59	43.64	25.90	187.16	52.25	94.62	65.30	28.33	27.81
37	E4b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E4b_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	Ix	Intron	0	13.36	17.29	12.03	16.89	35.74	12.80	15.71	46.60	17.94	9.08	1.64	2.14	2.66	5.34	15.20	14.80	10.02	45.53	23.40	6.98	7.49	8.86	68.91
40	Ix_SR1	SilentIntronRegion	0	13.37	17.30	12.04	16.90	35.76	12.81	15.72	46.63	17.95	9.08	1.64	2.14	2.66	5.34	15.20	14.81	10.03	45.56	23.41	6.98	7.50	8.86	68.95
41	ER5a	ExonRegion	0	1.16	1.16	0.01	0.00	0.00	2.01	0.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.12	0.00	1.81	0.00	0.00	2.36	0.00	4.08	4.14
42	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER6a	ExonRegion	0	17.37	25.13	31.19	101.11	26.23	57.55	37.40	75.92	22.76	14.98	53.13	35.44	19.37	26.44	49.16	33.05	15.82	97.49	45.43	69.61	16.77	9.15	32.40
44	E6_Da	NovelBoundary	1	0.00	29.86	3.19	0.00	96.43	40.03	16.74	82.56	38.71	0.00	0.00	0.00	0.00	9.71	49.45	3.59	4.39	85.77	60.24	0.00	0.00	0.00	139.06
45	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E6a_E7b	KnownJunction	0	18.08	26.90	3.22	10.16	39.73	88.76	47.39	61.69	13.72	1.37	2.53	6.30	0.00	22.19	15.95	40.33	13.28	72.34	22.59	12.85	0.00	0.00	7.00
47	ER7a	ExonRegion	0	8.29	20.06	0.36	1.03	29.29	8.82	23.80	32.28	8.68	0.15	0.42	0.82	3.80	3.20	9.33	5.94	0.45	36.16	8.18	0.69	5.54	0.00	45.08
48	E7_Ab	KnownBoundary	1	25.71	63.15	10.44	5.09	69.86	17.09	62.36	76.93	21.06	4.11	0.00	0.00	6.82	4.83	29.30	15.38	0.00	72.25	22.21	0.00	9.27	0.00	108.75
49	ER7b	ExonRegion	1	25.69	70.00	36.59	58.40	100.41	99.21	97.82	130.13	46.87	19.69	7.01	16.73	12.32	28.19	49.22	49.27	13.99	162.38	44.33	17.31	7.69	4.41	115.92
50	E7_Ac	KnownBoundary	1	25.26	71.17	138.35	156.86	76.83	110.05	74.28	137.19	75.95	52.78	32.69	30.16	19.97	2.83	43.51	36.66	33.38	167.31	56.85	49.92	51.52	27.56	61.12
51	ER7c	ExonRegion	1	25.15	58.90	68.42	128.53	64.90	54.29	66.61	108.52	54.92	37.13	48.22	56.84	9.26	43.89	87.11	51.94	38.98	134.41	49.58	90.64	27.77	22.65	79.21
52	E7_Da	NovelBoundary	1	9.33	45.32	19.13	29.73	50.85	5.79	23.98	70.85	28.62	17.03	11.21	6.30	34.09	2.47	49.45	34.69	13.09	96.38	25.41	24.61	25.51	14.08	155.28
53	E7a_E8a	KnownJunction	0	6.00	12.23	0.00	0.00	23.94	13.63	8.17	64.81	12.41	0.00	0.00	0.00	0.00	22.07	50.07	38.20	13.56	79.47	41.88	0.00	0.00	0.00	4.35
54	Ix	Intron	0	5.75	19.63	35.26	37.50	28.84	15.99	22.71	26.31	16.91	20.35	5.26	5.44	6.39	4.23	13.62	22.84	8.97	37.46	16.13	16.55	13.83	13.08	56.71
55	Ix_SR1	SilentIntronRegion	0	5.78	19.71	35.38	37.63	28.95	16.05	22.80	26.41	16.97	20.42	5.27	5.46	6.41	4.25	13.67	22.93	9.00	37.60	16.18	16.61	13.87	13.13	56.92
56	E8_Aa	NovelBoundary	0	3.26	13.81	43.14	27.34	16.30	5.22	9.85	15.36	10.07	17.03	1.95	0.00	0.00	0.00	9.64	7.35	16.92	41.74	8.28	15.98	23.23	16.35	52.50
57	ER8a	ExonRegion	0	4.60	3.56	11.90	26.94	2.93	3.37	1.68	29.48	7.85	2.75	6.91	4.19	0.92	9.80	11.03	8.25	4.58	35.30	12.59	8.79	1.79	0.00	3.48
58	E8_Da	KnownBoundary	0	8.22	5.92	69.04	71.15	20.37	48.38	17.58	24.89	22.68	20.76	8.32	11.25	0.00	9.71	13.85	10.60	0.00	71.18	28.61	20.39	4.70	9.61	10.50
59	ER8b	ExonRegion	0	1.54	1.85	0.00	6.03	3.97	18.67	6.86	1.47	1.20	0.00	0.00	1.31	0.71	2.61	4.22	3.06	0.00	12.37	3.67	2.64	0.00	0.00	0.36
60	ER8c	ExonRegion	0	0.00	0.00	0.00	1.36	0.00	16.50	6.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.54	0.00	0.00	0.00	0.00	0.00
61	ER8d	ExonRegion	0	0.00	0.00	0.00	0.85	0.00	11.46	2.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.77	0.00	0.00	0.00	0.00	0.00