Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MDH2 Gene 0 138.20 250.98 756.28 305.20 217.33 311.42 202.90 245.53 174.91 367.08 781.29 259.97 240.76 680.23 766.89 502.29 475.11 405.73 384.58 338.32 310.00 272.33 185.34 2 461263 Transcript 0 10.87 14.55 22.46 4.58 5.11 13.23 12.37 5.89 3.25 4.72 19.11 10.83 4.16 16.03 29.70 14.49 18.91 12.02 15.73 11.65 11.05 13.72 8.36 3 315758 Transcript 0 1.06 0.00 1.23 0.68 1.34 2.75 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 3.19 0.00 0.00 2.08 0.00 4 443006 Transcript 0 2.96 16.77 16.74 7.03 4.33 2.56 0.00 5.71 7.99 21.49 12.63 0.00 6.17 2.47 10.75 7.95 12.25 1.91 9.60 2.68 3.03 8.70 15.02 5 461665 Transcript 0 1.75 4.40 3.88 1.38 3.78 6.24 4.93 1.98 3.03 2.71 3.13 3.97 0.19 4.04 10.29 8.70 4.66 1.18 5.52 4.72 2.68 6.57 1.54 6 490105 Transcript 0 0.56 0.38 10.23 2.63 0.69 1.91 1.60 1.78 0.66 0.76 3.11 0.01 0.34 3.42 5.02 2.95 2.02 0.56 1.92 2.04 3.15 1.26 1.02 7 432020 Transcript 0 3.78 6.38 4.76 1.27 8.66 2.67 2.25 0.00 3.47 7.09 4.90 0.00 0.00 0.00 5.19 0.00 0.00 4.10 0.00 5.69 2.29 146.10 4.35 8 492663 Transcript 0 11.77 8.65 17.26 9.96 17.58 9.93 16.30 5.39 8.92 13.03 9.66 8.41 12.02 12.16 13.04 14.16 12.74 8.93 9.87 9.10 3.76 3.87 7.13 9 424167 Transcript 0 75.76 51.44 307.04 120.59 41.17 73.41 41.89 98.96 71.27 156.68 334.62 91.62 105.62 347.13 318.27 278.52 205.02 223.58 258.52 131.60 114.62 128.63 89.68 10 ER1a ExonRegion 0 27.76 35.05 29.34 4.81 8.18 31.28 26.48 2.34 1.02 5.40 8.64 0.00 0.00 12.52 27.14 10.49 10.68 19.35 28.11 23.15 9.85 16.67 12.09 11 E1_Ac KnownBoundary 1 544.84 462.09 333.16 60.83 130.14 384.55 395.17 22.92 6.77 76.77 152.78 0.00 0.00 110.42 455.78 271.55 134.64 326.57 708.35 265.51 172.73 462.99 311.23 12 ER1b ExonRegion 1 209.54 235.33 276.05 57.39 49.95 184.19 189.99 32.07 8.85 75.50 87.84 0.00 1.56 69.84 285.93 179.81 91.32 163.73 363.49 176.00 105.66 270.63 159.72 13 ER1c ExonRegion 1 493.44 501.90 559.97 171.75 209.60 644.96 529.12 148.41 62.65 258.46 586.62 9.68 35.50 763.72 1391.29 1060.93 545.49 541.93 1259.72 531.54 377.14 793.98 680.55 14 E1_Ad KnownBoundary 1 684.05 493.79 469.76 219.02 563.92 1173.47 707.22 154.73 75.90 244.18 1062.80 29.71 82.30 1432.29 2541.45 1511.83 1036.09 679.42 1068.74 609.90 567.92 682.08 743.17 15 E1_Ae KnownBoundary 1 308.57 199.44 421.81 137.61 116.47 391.48 106.56 227.14 149.04 301.36 386.78 18.31 67.69 291.25 530.94 473.04 409.07 421.62 170.45 172.77 168.03 50.33 165.01 16 ER1d ExonRegion 1 442.27 347.99 535.24 188.73 335.54 842.67 402.22 228.09 126.67 346.23 840.27 11.26 54.59 1007.28 1571.09 1117.40 867.87 614.49 636.44 446.30 434.40 341.95 518.85 17 ER1e ExonRegion 1 266.75 223.91 398.75 129.16 193.64 598.61 138.51 174.23 138.28 289.92 665.07 83.26 91.28 353.88 526.56 515.96 603.20 370.54 169.02 283.80 358.93 104.34 219.03 18 E1_Da KnownBoundary 0 0.00 2.63 4.29 1.90 0.00 0.00 0.00 4.19 0.00 0.00 7.95 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 8.71 0.00 0.00 19 E1a_E2a KnownJunction 0 0.00 3.35 2.99 0.00 0.00 0.00 0.00 7.19 3.50 1.50 9.95 5.85 6.82 4.30 26.45 4.36 15.43 7.05 4.80 0.00 8.03 11.14 4.35 20 E1a_E3b KnownJunction 0 100.61 122.54 607.34 171.54 89.30 234.58 76.27 148.98 124.10 315.44 857.06 206.17 179.86 328.39 316.71 269.33 414.68 349.41 123.11 321.63 525.54 129.51 142.47 21 E1a_E4a KnownJunction 0 2.96 16.77 16.74 7.03 4.33 2.56 0.00 5.71 7.99 21.49 12.63 0.00 6.17 2.47 10.75 7.95 12.25 1.91 9.60 2.68 3.03 8.70 15.02 22 ER1f ExonRegion 0 1.12 0.77 11.79 1.20 1.38 3.81 3.19 3.56 1.31 1.51 6.21 0.01 0.68 6.85 10.04 2.49 4.05 1.12 3.84 4.08 3.53 2.52 2.04 23 E1b_E3b KnownJunction 0 0.00 0.00 8.66 4.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.42 0.00 0.00 0.00 0.00 2.78 0.00 0.00 24 ER2a ExonRegion 0 4.85 5.24 35.05 8.93 7.16 8.42 10.62 8.14 5.24 7.26 38.75 26.63 5.66 31.27 35.51 28.62 30.62 9.67 14.29 11.79 15.26 13.34 8.64 25 ER3a ExonRegion 0 11.77 8.65 17.26 9.96 17.58 9.93 16.30 5.39 8.92 13.03 9.66 8.41 12.02 12.16 13.04 14.16 12.74 8.93 9.87 9.10 3.76 3.87 7.13 26 E3_Ab KnownBoundary 0 24.37 11.18 22.03 7.62 40.58 19.14 23.76 1.81 9.49 3.30 7.95 13.50 19.48 7.06 15.20 11.36 17.20 0.00 27.20 3.26 5.75 2.82 3.93 27 ER3b ExonRegion 0 140.38 287.45 1377.18 404.17 192.92 344.62 219.02 362.72 256.28 636.40 1404.62 362.93 376.12 1177.62 1694.97 973.58 873.97 772.68 776.09 685.19 645.03 613.32 427.23 28 E3a_E4a KnownJunction 0 291.01 633.90 2238.18 795.44 743.63 1086.59 857.29 604.08 488.25 990.91 2011.04 683.47 867.96 1739.84 2332.41 2085.18 1094.62 1616.52 1136.41 1064.73 782.04 986.66 673.69 29 ER4a ExonRegion 0 156.68 694.52 2308.53 812.03 600.92 1102.84 837.16 623.24 501.52 1136.28 2307.17 655.69 786.57 1924.28 2136.24 1681.83 1313.84 1296.83 1048.82 1021.66 827.55 861.37 589.80 30 E4_Da KnownBoundary 0 140.17 717.11 1546.75 560.83 482.17 924.07 709.25 401.01 334.49 836.67 1814.88 633.51 596.39 1316.27 1512.58 1200.20 1043.76 981.66 738.94 773.78 561.99 571.68 384.56 31 E4_Db KnownBoundary 1 96.76 727.83 1928.64 625.10 597.11 1448.77 773.91 514.41 346.38 821.79 2058.36 288.09 220.44 997.89 1311.09 766.72 1317.53 600.83 613.48 864.86 747.44 734.80 284.60 32 ER4b ExonRegion 0 128.13 863.96 2617.49 876.02 635.80 1471.69 892.45 693.38 527.01 1274.12 2777.72 686.05 611.15 2000.67 2211.87 1307.28 1665.43 1078.23 937.72 1105.07 956.58 899.44 444.34 33 ER4c ExonRegion 0 171.69 798.89 2660.87 865.31 627.10 1494.43 765.29 732.76 507.41 1253.98 2878.67 628.69 549.87 1961.74 2093.30 1046.91 1743.87 999.02 879.64 1125.98 1094.98 909.99 382.83 34 E4c_E5a KnownJunction 0 353.77 799.53 2916.19 890.03 668.59 1415.83 715.48 785.66 526.67 1263.59 2752.59 713.63 656.94 2056.81 2270.85 947.87 1648.06 1041.81 880.59 1188.80 1108.90 785.50 387.55 35 ER5a ExonRegion 0 459.90 558.07 2657.67 951.57 381.34 707.48 372.84 768.63 588.00 1326.72 2808.70 758.60 847.87 2261.65 2335.96 1688.76 1756.44 1700.67 1340.60 1162.39 1029.77 892.88 577.93 36 E5_Da KnownBoundary 0 3.78 9.14 8.28 1.47 8.06 2.44 12.54 3.86 0.00 4.49 4.95 0.00 0.00 2.47 4.33 20.76 4.77 2.45 0.00 0.00 8.34 8.70 0.00 37 E5a_E6b KnownJunction 0 1358.76 813.21 3884.49 1582.02 640.49 990.17 595.93 1232.88 848.46 1931.40 4224.54 1199.34 1320.69 4740.68 4534.04 3989.64 2691.91 3000.23 3752.01 1818.44 1408.34 1741.66 1268.58 38 E5a_E7a KnownJunction 0 3.78 6.38 4.76 1.27 8.66 2.67 2.25 0.00 3.47 7.09 4.90 0.00 0.00 0.00 5.19 0.00 0.00 4.10 0.00 5.69 2.29 146.10 4.35 39 ER5b ExonRegion 0 1.75 4.40 3.88 1.38 3.78 6.24 4.93 1.98 3.03 2.71 3.13 3.97 0.19 4.04 10.29 8.70 4.66 1.18 5.52 4.72 2.68 6.57 1.54 40 ER6a ExonRegion 0 145.33 101.00 598.80 230.10 74.03 133.56 76.57 190.71 136.07 308.13 659.44 177.51 206.36 679.42 622.32 542.41 401.61 439.76 511.25 256.38 225.88 250.37 173.26 41 ER6b ExonRegion 0 632.08 769.78 3020.11 1051.09 574.60 895.91 689.00 949.68 658.85 1439.84 3859.64 1109.52 1293.47 2826.27 2879.97 2109.88 2140.57 1784.76 1525.15 1331.77 1361.24 838.11 708.51 42 E6a_E7a KnownJunction 0 297.09 662.45 2554.70 1013.49 723.43 1097.44 952.59 709.68 559.05 1286.02 2279.47 893.39 820.73 2107.67 2352.31 1474.66 1405.23 1525.28 808.87 1057.45 996.96 605.84 443.38 43 ER7a ExonRegion 0 402.57 905.80 2538.39 925.07 942.17 1333.34 746.29 879.30 684.25 1365.61 3359.65 847.96 847.27 2836.02 2536.59 2201.81 1834.66 2085.64 1851.68 1118.98 1248.85 1009.20 731.00 44 E7a_E8a KnownJunction 0 417.04 1030.41 2585.33 987.95 937.35 1132.25 652.02 843.09 606.85 1118.26 3119.74 1090.26 993.28 3194.97 3058.17 2691.00 1863.11 2025.37 1973.33 1233.67 1242.59 987.45 876.34 45 ER8a ExonRegion 0 259.06 602.59 2057.18 778.26 463.87 668.55 464.46 571.18 446.84 868.63 2084.40 957.59 1028.29 2301.10 2432.06 1603.34 1262.72 1305.08 1006.99 927.59 880.67 681.29 552.38 46 E8a_E9a KnownJunction 0 338.21 601.47 2129.64 800.33 504.16 567.85 417.38 572.41 472.13 904.87 2293.16 471.90 603.86 2192.19 2623.04 1346.40 1601.21 1067.88 918.43 940.99 878.47 810.61 436.29 47 ER9a ExonRegion 0 352.47 855.64 2230.10 910.50 696.31 919.07 726.94 611.18 479.29 929.28 2230.04 664.20 567.25 2135.67 2401.05 1355.31 1440.69 1023.24 966.36 954.66 910.74 715.47 470.17 48 E9_Da KnownBoundary 0 6.30 0.00 15.23 9.69 11.12 7.72 13.20 4.60 1.10 8.92 12.63 0.00 5.84 12.48 13.35 0.00 0.00 21.72 3.76 6.07 3.15 8.45 0.00 49 E9a_E10a KnownJunction 0 979.80 1247.74 2731.60 1102.76 1775.38 2266.82 1585.88 737.90 548.92 1075.82 2865.30 927.75 901.89 2813.89 3304.42 1671.10 2223.00 1053.04 1427.90 1177.67 1371.21 876.25 524.47 50 ER9b ExonRegion 0 6.19 1.89 15.28 11.08 8.32 13.26 7.22 7.22 6.46 5.23 9.80 5.73 4.88 14.84 14.22 14.63 8.43 7.39 5.79 6.82 3.36 6.89 6.10 51 ER10a ExonRegion 0 141.92 304.95 735.24 373.64 299.24 328.77 212.69 290.94 187.95 373.60 624.98 333.87 221.43 575.91 681.38 382.55 367.44 262.61 313.19 306.71 242.01 269.99 136.69 52 E10_Da KnownBoundary 0 77.57 90.97 124.24 92.83 52.46 33.50 36.17 56.31 41.70 95.36 28.11 12.15 6.82 60.63 60.57 24.01 27.77 54.72 18.35 31.19 50.35 14.82 15.54 53 ER10b ExonRegion 0 45.20 71.37 150.02 131.63 99.17 78.22 45.69 94.03 59.84 104.48 41.35 23.96 14.10 73.98 82.13 41.27 19.75 48.65 48.98 55.66 32.54 37.42 17.67 54 ER10c ExonRegion 0 1.06 0.00 1.23 0.68 1.34 2.75 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 3.19 0.00 0.00 2.08 0.00