Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C7orf64 Gene 0 49.02 59.72 40.05 57.56 118.87 146.91 66.61 66.42 50.36 52.88 38.34 62.79 50.28 40.51 45.38 34.12 29.95 17.66 19.76 28.36 15.42 35.43 19.51 2 450580 Transcript 0 7.73 4.83 0.60 0.65 15.80 0.00 4.44 7.10 0.00 3.67 5.93 24.30 14.17 2.40 2.32 2.57 0.04 1.45 1.05 2.11 1.82 5.98 1.84 3 265732 Transcript 1 57.12 70.91 75.01 85.04 128.35 83.19 113.45 63.25 44.30 75.40 93.97 159.35 39.93 45.91 72.19 30.76 57.32 8.66 12.80 29.91 14.09 33.98 20.83 4 481551 Transcript 0 29.99 36.51 21.18 36.53 70.43 90.39 39.60 38.59 30.28 23.12 13.03 29.92 28.79 17.52 28.67 12.08 8.92 6.25 8.93 13.83 5.48 20.79 8.90 5 496410 Transcript 0 2.02 0.41 1.87 1.55 1.91 3.20 1.91 1.46 2.81 1.75 2.30 0.94 3.70 0.60 0.81 1.17 1.95 3.96 1.67 1.96 2.68 0.93 1.54 6 ER1a ExonRegion 0 9.55 10.63 1.26 1.79 36.54 52.66 27.77 2.72 1.62 3.83 2.71 0.00 0.00 6.13 7.71 10.70 3.30 5.49 6.46 3.95 4.16 2.26 5.45 7 E1_Ab KnownBoundary 0 24.52 33.15 1.30 3.13 96.86 117.60 69.07 5.59 3.79 8.38 11.16 0.00 6.33 2.12 10.75 29.91 10.94 9.00 14.97 5.50 12.42 5.51 10.41 8 ER1b ExonRegion 0 97.99 85.31 37.80 68.26 266.55 468.48 151.11 68.71 55.38 65.43 57.38 17.43 42.37 63.05 39.03 111.92 50.44 72.82 77.05 53.55 56.24 39.20 63.83 9 E1_Da KnownBoundary 0 0.00 0.00 1.77 2.06 0.00 0.00 5.48 4.15 6.51 2.55 4.32 0.00 0.00 0.00 0.00 0.00 0.00 4.81 0.00 0.00 3.15 2.45 0.00 10 E1a_E2a KnownJunction 0 33.93 18.81 9.43 16.41 24.45 44.18 11.31 39.31 22.25 60.14 40.06 0.00 6.82 12.36 13.72 14.36 8.23 11.03 3.48 8.50 16.25 21.19 11.01 11 ER1c ExonRegion 0 2.28 1.24 5.62 4.65 5.74 6.71 3.69 4.38 6.82 3.83 4.22 2.81 2.81 1.81 2.42 3.51 5.85 9.55 5.02 5.87 8.03 2.80 4.63 12 E1b_E2a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 2.90 2.03 0.00 1.62 1.42 2.68 0.00 8.28 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 33.17 58.89 53.21 87.30 205.21 233.25 69.39 96.30 71.10 105.01 80.98 67.75 66.96 78.97 49.90 99.93 59.52 58.10 54.99 59.01 36.53 47.90 51.78 14 E2_Da NovelBoundary 0 6.74 9.21 24.33 9.26 16.55 0.00 0.00 16.80 13.63 9.08 2.21 0.00 6.01 0.00 4.45 4.10 0.00 1.62 8.85 9.52 0.00 0.00 3.50 15 E2a_E3a KnownJunction 0 46.08 125.96 58.45 79.54 388.71 731.06 311.39 68.96 62.88 85.64 55.17 68.57 81.81 38.08 48.33 29.91 64.52 10.69 8.09 34.96 10.75 49.48 7.60 16 ER3a ExonRegion 0 69.13 150.81 77.49 125.06 223.77 337.59 166.49 123.79 90.94 115.10 101.01 168.73 115.42 73.25 59.59 54.41 66.15 13.95 25.50 53.34 19.74 69.43 16.05 17 E3a_E4a KnownJunction 0 3.78 2.63 0.00 0.00 20.63 0.00 0.00 8.30 0.00 3.79 5.32 25.21 18.83 2.47 0.00 3.59 0.00 2.11 0.00 0.00 2.41 5.08 3.67 18 E3a_E5a KnownJunction 0 149.95 148.26 105.56 188.12 277.59 209.88 112.92 150.13 117.42 142.53 150.46 260.94 114.60 108.36 101.37 105.27 105.10 15.05 52.33 79.64 20.39 92.65 21.51 19 ER3b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 I3 Intron 0 15.38 7.15 7.52 8.06 13.23 4.53 9.12 7.52 3.17 6.01 4.34 5.87 6.16 3.83 2.61 3.78 2.72 1.99 3.58 4.46 1.65 1.72 1.76 21 I3_SR1 SilentIntronRegion 0 20.07 4.33 7.98 10.88 14.54 0.79 5.06 6.87 3.88 7.23 3.91 6.16 5.64 3.84 2.66 4.79 4.14 4.37 4.13 4.72 1.68 1.77 4.18 22 I3_AR1 ActiveIntronRegion 0 17.24 8.29 9.26 8.74 14.16 6.93 11.57 8.54 4.31 5.76 6.55 5.18 7.80 4.53 2.63 4.01 3.40 2.40 5.09 5.52 2.00 1.83 1.15 23 E4_Aa NovelBoundary 0 23.93 6.71 5.20 6.03 37.86 7.78 12.54 11.54 6.92 13.27 0.00 7.50 19.64 2.47 6.30 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 24 ER4a ExonRegion 0 11.68 7.03 1.19 1.29 10.98 0.00 8.87 5.90 0.00 3.56 6.55 23.39 9.50 2.32 4.63 1.54 0.09 0.79 2.11 4.23 1.23 6.87 0.00 25 E4_Da NovelBoundary 0 6.89 12.17 8.13 14.12 7.64 6.64 25.92 33.48 15.62 5.64 10.06 48.02 28.24 2.47 4.57 0.00 0.00 0.00 0.00 2.62 0.00 2.27 8.19 26 I4 Intron 0 6.66 5.12 3.45 0.00 16.85 5.77 4.17 3.24 1.16 3.23 3.65 14.43 12.68 1.68 2.58 0.00 0.00 0.00 2.01 2.68 0.00 2.62 0.00 27 I4_AR1 ActiveIntronRegion 0 6.75 5.19 3.49 0.00 17.06 5.85 4.22 3.28 1.17 3.25 3.70 14.61 12.84 1.71 2.61 0.00 0.00 0.00 2.03 2.69 0.00 2.66 0.00 28 E5_Aa NovelBoundary 1 28.15 26.05 6.77 14.38 52.89 5.74 28.48 17.54 7.64 15.74 2.63 35.86 41.39 7.06 0.00 8.72 0.00 1.95 9.41 3.13 6.18 9.61 4.35 29 ER5a ExonRegion 0 87.39 134.93 100.20 123.55 217.40 218.07 138.38 136.63 104.55 115.97 106.22 173.60 125.81 97.87 88.64 81.31 84.79 33.89 39.16 62.42 34.75 76.87 37.41 30 E5_Da KnownBoundary 0 81.57 131.62 19.54 27.54 94.99 141.96 54.10 33.31 32.09 31.51 8.00 37.36 33.76 16.83 4.45 7.95 8.32 1.87 8.47 14.51 6.30 25.90 11.10 31 E5a_E5b KnownJunction 1 57.12 70.91 75.01 85.04 128.35 83.19 113.45 63.25 44.30 75.40 93.97 159.35 39.93 45.91 72.19 30.76 57.32 8.66 12.80 29.91 14.09 33.98 20.83 32 ER5b ExonRegion 0 37.31 43.08 20.05 37.52 93.10 140.72 38.83 49.92 41.75 32.45 16.91 30.11 36.63 21.01 32.12 12.21 10.90 6.51 8.64 14.52 6.45 28.31 11.38 33 E5_Ab KnownBoundary 0 9.26 12.56 20.58 57.37 73.77 92.11 25.97 44.98 33.45 22.08 6.63 25.96 19.80 13.95 27.07 7.60 4.39 1.91 3.67 15.60 0.00 21.37 11.44 34 ER5c ExonRegion 0 83.28 70.56 65.42 77.76 144.37 133.11 97.27 93.09 60.13 80.26 50.76 97.50 53.18 63.86 79.41 50.87 46.96 28.53 28.92 42.93 22.75 41.75 28.72 35 E5_Db KnownBoundary 0 25.19 47.23 34.00 54.41 15.37 52.19 66.16 36.68 26.10 22.99 5.21 18.91 12.99 11.65 9.89 15.98 4.77 2.53 9.04 14.96 0.00 2.45 8.45 36 ER5d ExonRegion 0 22.66 29.94 22.31 35.54 47.75 40.05 40.37 27.27 18.82 13.78 9.14 29.73 20.95 14.03 25.21 11.95 6.93 5.99 9.23 13.13 4.51 13.27 6.41 37 IG7_SR1 SilentIntergenicRegion 0 0.99 6.74 1.71 2.95 7.51 15.44 16.31 3.65 2.62 4.82 0.90 7.03 3.70 0.63 5.75 0.00 3.09 1.73 4.56 3.03 1.03 0.97 5.50 38 IG7_AR1 ActiveIntergenicRegion 0 5.16 10.96 13.43 10.12 18.78 17.56 17.78 10.16 5.32 8.61 3.40 4.24 3.41 4.46 3.85 4.58 1.88 5.76 7.45 6.67 1.14 2.26 2.28 39 IG7_AR5 ActiveIntergenicRegion 0 6.85 4.63 12.42 9.79 15.89 0.96 17.84 15.06 9.31 9.61 1.02 11.31 8.12 1.41 3.90 3.13 2.91 2.42 1.67 4.61 0.00 1.33 2.26