Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PMS2L5 Gene 0 21.91 24.36 31.36 24.96 23.57 28.99 29.21 32.55 20.35 19.35 19.15 14.07 9.26 12.97 16.81 18.06 16.28 13.47 11.08 17.34 10.38 4.22 7.37 2 337023 Transcript 0 0.47 1.92 0.00 0.23 1.19 4.38 1.77 1.15 0.00 0.38 3.76 0.00 0.00 0.99 0.97 0.00 10.27 0.10 0.00 0.12 4.65 0.00 0.16 3 318568 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 398065 Transcript 0 14.11 19.55 25.41 26.09 21.59 28.35 34.85 19.42 10.86 11.27 9.28 3.06 3.97 5.30 5.82 7.86 6.10 4.40 5.33 11.03 4.57 4.03 3.41 5 394959 Transcript 0 0.00 0.00 267.52 215.73 0.00 0.00 0.00 187.31 114.74 145.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 140.61 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 1 0.94 3.84 0.00 0.45 2.38 8.76 3.53 2.30 0.00 0.76 7.52 0.00 0.00 1.99 1.93 0.00 20.54 0.21 0.00 0.24 9.30 0.00 0.33 7 ER1b ExonRegion 1 74.44 66.18 13.15 17.65 68.93 104.40 114.49 15.88 6.59 13.57 52.68 0.00 5.88 21.06 29.50 33.50 51.92 4.17 10.26 30.47 33.50 14.76 15.38 8 E1_Da NovelBoundary 0 37.56 31.97 11.21 5.53 12.73 50.03 21.24 7.15 5.15 3.30 7.26 0.00 0.00 4.89 4.45 16.66 4.77 11.15 23.25 12.66 0.00 0.00 12.80 9 E1a_E2b KnownJunction 1 144.40 115.90 28.65 40.12 173.94 121.86 144.68 32.69 20.37 39.19 112.92 0.00 6.66 26.37 42.03 66.82 38.34 11.19 31.44 84.88 48.31 34.66 36.96 10 E1a_E2c NovelJunction 0 0.00 0.00 12.54 13.98 0.00 0.00 0.00 19.96 12.27 11.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.38 0.00 0.00 0.00 0.00 0.00 11 I1_AR2 ActiveIntronRegion 1 3.05 3.23 21.18 13.46 7.96 4.00 3.42 8.37 6.57 4.34 16.79 1.42 0.93 4.32 6.74 5.25 3.28 1.09 5.69 11.38 0.44 0.83 2.91 12 E2_Ac NovelBoundary 1 206.04 114.32 136.84 121.66 261.38 191.59 210.04 93.07 95.34 106.29 136.46 37.36 64.28 95.42 28.31 125.44 100.23 108.82 128.76 178.01 29.22 51.50 69.14 13 ER2a ExonRegion 0 40.92 35.93 8.17 9.09 41.92 49.51 59.14 11.52 4.53 9.18 25.77 0.00 1.56 8.66 11.61 20.80 15.40 2.46 6.37 23.40 12.49 12.50 7.83 14 ER2b ExonRegion 1 105.83 98.63 25.24 26.85 118.54 127.27 155.83 35.09 17.04 32.00 70.36 0.00 4.22 19.00 26.69 53.80 36.64 7.39 19.11 66.17 36.14 34.79 23.49 15 ER2c ExonRegion 0 40.48 37.35 60.31 30.77 32.86 37.77 31.93 49.48 41.54 32.99 60.53 36.11 22.03 35.24 35.17 45.90 58.60 18.71 18.35 32.61 32.47 5.98 16.69 16 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 10.22 11.87 46.25 37.75 5.97 3.50 3.06 49.33 34.24 29.77 34.04 2.89 2.26 17.98 23.24 34.50 16.92 16.76 16.81 33.04 17.78 20.67 12.56 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 15.51 42.27 59.13 42.26 44.45 63.88 80.26 46.37 28.37 19.48 11.33 12.23 14.30 12.55 11.69 10.65 9.01 12.65 14.94 20.70 5.80 3.60 5.82 22 E4a_E5a KnownJunction 0 0.00 0.00 34.33 53.01 0.00 0.00 0.00 19.80 10.53 16.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 0.00 0.00 23 ER5a ExonRegion 1 31.50 32.62 47.28 39.34 21.66 44.65 36.68 50.46 32.22 22.54 12.01 36.26 11.09 19.74 34.82 30.86 8.70 16.97 11.15 16.31 4.49 0.82 5.08 24 E5_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E5a_E5b KnownJunction 0 0.00 0.00 308.45 272.39 0.00 0.00 0.00 256.43 119.53 165.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 166.85 0.00 0.00 0.00 0.00 0.00 26 E5_Ab KnownBoundary 0 66.31 90.58 125.28 100.45 106.20 65.53 73.80 106.96 74.33 92.51 96.39 29.86 8.12 17.42 6.30 89.12 88.92 100.23 85.08 119.59 24.46 30.62 16.48 27 ER5b ExonRegion 0 12.28 26.03 54.90 45.52 9.63 23.47 20.12 56.00 35.32 18.58 10.82 5.20 9.38 6.50 5.80 9.51 13.20 5.54 3.19 21.28 4.41 2.08 0.00 28 ER5c ExonRegion 0 12.13 24.06 49.64 39.79 5.29 7.56 2.65 47.30 28.74 17.90 9.85 7.71 6.75 8.04 7.64 6.60 8.78 5.32 6.99 17.90 2.26 2.95 2.65 29 E5_Db KnownBoundary 1 266.34 240.48 432.89 382.70 551.70 316.12 403.60 330.60 278.59 314.47 358.72 69.62 137.33 156.10 200.51 267.79 232.26 325.70 280.86 260.27 106.75 97.42 121.56 30 E5b_E5c KnownJunction 0 0.00 0.00 369.12 298.93 0.00 0.00 0.00 221.84 167.68 213.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 210.71 0.00 0.00 0.00 0.00 0.00 31 ER5d ExonRegion 0 14.82 19.12 35.54 22.90 7.49 5.50 2.65 25.93 21.99 14.22 6.57 4.33 14.07 0.97 8.70 7.13 3.30 1.85 6.37 8.94 2.20 2.08 2.94 32 E5c_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER5e ExonRegion 0 15.47 14.94 30.21 24.44 11.44 8.85 1.83 34.15 18.02 19.42 1.60 1.49 14.56 0.00 4.20 5.43 0.57 6.12 6.37 6.46 1.90 1.37 1.42 34 ER6a ExonRegion 1 27.19 42.27 28.93 25.36 39.65 28.79 18.42 53.16 23.62 26.87 10.31 25.19 24.45 6.50 26.90 11.98 14.50 11.87 26.93 13.54 6.61 0.00 7.21 35 E6_Da KnownBoundary 1 42.53 88.93 81.96 98.79 66.30 122.43 54.98 76.85 41.12 43.41 30.85 74.42 104.86 43.68 92.96 39.48 42.26 48.54 82.26 61.55 16.74 14.70 52.84 36 E6a_E6b KnownJunction 0 0.00 0.00 125.01 75.88 0.00 0.00 0.00 83.67 57.00 56.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.27 0.00 0.00 0.00 0.00 0.00 37 E6_Ab KnownBoundary 0 35.41 58.34 50.41 54.67 47.96 42.31 54.63 46.87 42.39 33.60 16.37 0.00 20.78 7.24 20.52 15.21 12.62 39.80 12.80 17.77 0.00 0.00 8.19 38 ER6b ExonRegion 1 49.10 73.62 38.97 35.98 74.92 49.88 39.45 72.25 34.34 36.24 19.33 39.83 43.15 14.94 62.67 21.40 26.41 17.00 38.22 26.38 9.70 0.00 11.75 39 ER6c ExonRegion 0 62.23 59.46 33.18 30.66 68.34 37.89 36.20 70.14 32.80 35.62 15.85 21.30 22.42 17.48 40.27 18.25 17.89 13.75 19.11 21.11 8.02 0.00 8.52 40 E6_Dc NovelBoundary 0 55.79 14.27 8.99 20.71 105.94 35.77 95.57 8.38 15.19 17.22 5.37 6.00 0.00 7.65 22.13 11.36 8.42 7.25 16.94 17.00 2.66 0.00 4.01 41 E6c_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER6d ExonRegion 0 57.15 26.44 18.38 19.08 13.38 12.84 10.59 43.21 22.23 22.94 3.87 0.00 0.00 3.25 2.90 2.97 3.30 5.54 3.19 4.26 0.00 0.00 2.94 43 I6_SR2 SilentIntronRegion 0 22.86 14.64 27.80 38.75 22.48 15.95 13.50 30.11 13.08 31.65 1.74 5.58 8.11 2.75 4.30 4.46 6.93 5.49 3.82 16.60 1.32 3.75 10.57 44 ER7a ExonRegion 0 7.03 6.54 12.92 13.63 9.40 11.75 12.25 13.71 7.78 11.79 6.74 7.93 3.51 5.26 4.74 6.56 4.87 13.87 6.05 8.09 3.94 0.88 4.34