Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LIMK1 Gene 0 23.92 28.60 113.58 45.47 37.32 69.93 37.05 87.12 90.62 62.43 173.48 39.28 76.04 158.50 146.91 174.94 142.29 70.42 79.28 49.37 214.05 144.52 323.00 2 418310 Transcript 0 0.00 0.00 0.76 0.21 0.00 0.00 0.27 1.07 0.38 0.00 0.00 0.37 0.00 0.01 0.00 0.00 0.01 0.28 0.01 1.32 0.69 0.01 0.31 3 419043 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.21 0.00 2.60 4 336180 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 435201 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 423685 Transcript 1 28.15 0.47 5.87 0.23 3.52 7.20 3.94 12.28 13.04 3.99 89.60 15.88 19.62 28.47 63.41 87.12 91.68 2.54 1.09 3.69 2.03 12.75 18.77 7 486361 Transcript 0 0.67 0.56 2.44 0.61 0.49 0.95 1.09 4.59 1.29 0.16 1.76 0.40 0.35 2.51 1.04 2.07 1.52 3.02 2.32 2.18 1.01 0.94 9.18 8 491052 Transcript 0 0.95 0.20 1.68 0.00 0.00 0.00 0.00 0.80 2.84 0.57 5.21 0.00 0.00 0.30 0.33 0.96 3.76 0.55 1.43 3.64 1.70 2.10 0.23 9 483414 Transcript 0 15.90 13.85 17.95 16.84 18.34 17.06 19.50 12.65 11.27 12.00 14.13 15.23 24.55 21.75 24.88 31.35 22.10 17.25 19.51 18.66 15.98 15.62 54.09 10 476792 Transcript 0 3.51 4.03 10.63 5.84 8.20 10.29 7.07 5.87 5.50 4.02 3.71 6.21 4.16 6.51 16.37 10.13 8.05 7.90 4.85 6.34 12.55 8.41 29.14 11 ER1a ExonRegion 0 0.00 0.00 1.51 0.42 0.00 0.01 0.55 2.15 0.76 0.00 0.00 0.74 0.00 0.01 0.00 0.00 0.03 0.57 0.01 2.64 1.38 0.03 0.62 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.21 0.00 2.60 14 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 4.83 0.00 3.59 0.00 0.00 0.00 0.00 5.50 0.00 0.00 15 ER2b ExonRegion 0 1.41 0.40 12.09 1.66 0.00 1.44 3.09 6.68 5.28 7.85 8.34 2.46 2.76 16.97 7.74 2.97 3.69 3.26 4.56 15.14 29.17 8.62 22.17 16 E2_Ac KnownBoundary 0 3.78 5.33 44.85 13.75 0.00 6.87 9.67 20.09 23.50 25.14 20.90 12.60 13.15 50.68 17.80 11.71 20.76 11.81 18.73 52.35 96.56 23.15 68.72 17 ER2c ExonRegion 0 19.36 18.38 65.15 26.30 11.25 36.10 13.46 44.30 59.99 35.30 87.73 19.72 25.27 76.94 51.09 42.55 39.49 34.08 41.82 71.95 181.44 83.26 126.17 18 E2a_E3a KnownJunction 0 34.01 41.83 91.22 56.47 13.24 44.18 16.30 82.64 113.92 43.33 140.77 18.61 45.29 93.06 45.00 81.26 68.16 71.42 94.40 100.99 274.42 156.64 203.33 19 ER3a ExonRegion 1 10.67 31.55 128.60 54.91 11.72 47.51 26.53 95.76 124.58 71.36 147.76 46.24 24.03 103.94 84.79 82.67 77.59 93.68 111.26 104.72 341.71 185.41 306.47 20 E3a_E6a KnownJunction 1 7.33 30.72 194.88 62.93 30.90 46.11 18.81 110.82 157.17 111.83 213.63 97.98 25.81 137.21 77.76 121.85 148.48 115.49 129.98 118.95 492.74 134.84 383.37 21 ER4a ExonRegion 1 31.12 0.94 6.74 0.47 3.73 7.29 5.63 9.90 8.12 3.39 76.39 3.10 5.65 32.58 71.94 98.54 72.38 5.08 2.18 4.95 4.06 15.04 27.37 22 E4a_E6a KnownJunction 0 25.19 0.00 5.00 0.00 3.31 7.10 2.25 14.66 17.97 4.59 102.82 28.66 33.60 24.37 54.89 75.71 110.99 0.00 0.00 2.43 0.00 10.47 10.16 23 ER5a ExonRegion 0 1.35 1.12 4.89 1.22 0.98 1.89 2.19 6.64 2.57 0.31 3.52 0.79 0.71 2.73 2.09 4.15 3.04 6.05 4.64 4.36 2.03 1.87 18.37 24 E5_Ab KnownBoundary 0 9.85 0.00 8.96 5.23 0.00 2.90 0.00 7.39 4.86 1.42 9.79 0.00 0.00 2.47 4.70 24.18 0.00 9.95 9.60 8.76 4.88 13.90 35.94 25 ER5b ExonRegion 0 6.25 1.94 5.28 1.62 0.00 0.83 0.00 5.64 6.62 0.49 7.36 0.00 0.00 2.17 7.11 9.62 5.74 4.40 4.10 12.41 3.52 12.30 16.85 26 E5_Da KnownBoundary 0 0.00 2.76 11.74 1.90 0.00 0.00 0.00 10.19 13.57 6.10 5.37 0.00 0.00 2.47 4.45 3.85 8.42 4.52 3.58 8.56 4.82 2.51 10.59 27 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5c ExonRegion 0 1.89 0.39 3.35 0.00 0.00 0.00 0.00 1.61 5.68 1.15 7.73 0.00 0.00 0.60 0.66 1.93 7.53 1.10 2.85 7.28 3.40 1.13 0.46 29 E5b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.06 0.00 30 ER6a ExonRegion 0 8.89 22.95 209.87 82.28 28.49 97.01 42.56 187.29 215.28 129.65 420.55 72.67 107.70 239.13 216.01 270.59 305.70 147.77 149.14 132.42 543.56 306.41 559.40 31 E6a_E7a KnownJunction 1 7.33 29.93 292.72 119.96 24.36 89.21 29.72 276.80 291.95 173.53 434.69 43.36 181.32 256.11 548.98 552.76 388.59 210.33 224.48 192.45 586.39 515.77 836.30 32 E7_Ab NovelBoundary 0 6.22 32.69 197.33 95.53 27.84 109.99 36.04 170.99 220.37 160.42 433.27 85.53 188.62 272.59 330.68 636.24 278.73 182.27 176.01 133.40 482.91 357.97 920.73 33 ER7a ExonRegion 0 2.20 27.96 246.15 107.67 21.85 84.74 27.36 222.47 263.85 170.79 457.53 85.33 221.41 306.42 448.85 631.08 340.82 163.45 208.11 161.17 571.68 450.82 899.47 34 ER7b ExonRegion 0 18.11 37.10 228.66 89.68 24.33 87.70 54.76 213.22 237.29 183.44 450.77 100.38 167.04 383.33 398.62 524.20 326.48 175.47 240.12 129.39 564.97 406.48 886.15 35 E7a_E8a KnownJunction 1 10.52 34.53 255.46 88.47 34.30 124.98 40.94 241.27 264.64 202.46 549.56 47.12 114.93 360.41 291.00 213.88 405.89 127.72 93.27 111.66 626.11 375.42 537.45 36 ER8a ExonRegion 0 60.61 53.28 256.03 76.16 56.18 144.72 71.24 200.93 217.91 165.24 404.38 104.76 174.21 373.88 328.53 410.73 307.17 196.38 198.28 116.53 519.17 344.68 828.67 37 E8a_E9a KnownJunction 0 20.89 18.68 296.12 88.67 61.55 116.18 64.70 192.23 209.98 124.53 395.10 71.57 160.05 288.19 258.36 297.87 275.74 169.75 148.15 91.27 484.27 221.18 521.74 38 E9_Da NovelBoundary 0 20.97 56.24 273.14 77.61 63.24 148.38 87.13 129.01 157.98 104.90 314.34 86.13 193.49 374.19 265.41 382.81 271.81 166.89 137.70 110.32 474.76 259.08 666.26 39 ER9a ExonRegion 0 15.16 30.63 271.12 74.48 52.13 101.10 60.94 164.26 165.31 115.91 344.37 69.83 151.75 316.02 214.69 326.26 265.88 171.42 121.56 98.35 454.67 228.25 528.69 40 ER9b ExonRegion 0 26.99 54.07 259.36 69.14 60.81 137.24 94.66 168.64 168.65 121.10 347.04 70.85 171.40 348.52 215.95 374.02 288.53 174.44 106.78 103.24 438.14 255.09 626.97 41 E9_Db NovelBoundary 1 53.71 67.29 231.87 74.85 55.52 175.24 91.24 184.26 178.09 107.66 375.41 87.18 113.14 377.13 179.62 413.57 293.78 145.54 147.58 113.58 421.82 289.27 648.50 42 E9_Dc NovelBoundary 0 10.52 0.00 10.88 8.66 4.33 2.90 2.25 7.15 7.70 10.29 0.00 0.00 0.00 2.59 10.75 4.36 4.77 8.25 9.32 6.01 8.96 5.20 8.45 43 E9c_E10a KnownJunction 0 76.16 95.11 273.70 86.40 60.44 169.45 93.49 188.37 227.60 147.69 426.63 105.03 196.58 435.64 295.94 351.53 320.71 164.57 122.07 114.03 563.22 343.15 705.27 44 ER9c ExonRegion 0 50.52 61.01 235.94 72.63 51.53 145.05 77.47 184.33 191.32 128.79 394.81 74.16 141.46 389.84 201.31 371.80 313.27 167.79 114.47 105.15 498.39 307.76 615.08 45 I9 Intron 0 11.24 1.08 2.91 4.32 8.53 1.95 0.70 2.74 1.96 0.91 0.00 0.00 2.05 2.03 7.16 17.37 8.77 1.46 3.38 7.91 3.51 0.00 17.16 46 I9_AR1 ActiveIntronRegion 0 11.48 1.10 2.97 4.41 8.71 1.99 0.72 2.79 2.00 0.93 0.00 0.00 2.10 2.07 7.31 17.74 8.95 1.49 3.46 8.08 3.59 0.00 17.53 47 ER10a ExonRegion 0 30.96 55.19 183.93 60.01 54.14 124.06 63.64 129.68 134.79 103.56 301.13 67.38 118.04 329.58 197.02 270.04 237.19 137.43 113.24 68.05 368.01 245.56 531.41 48 E10_Da NovelBoundary 0 3.48 0.00 43.46 7.42 3.90 5.05 7.02 21.40 18.81 10.48 15.58 0.00 6.17 12.66 30.90 47.59 18.79 9.04 22.97 17.19 17.11 9.06 71.19 49 E10a_E11a KnownJunction 0 37.19 49.86 174.00 47.55 66.98 162.69 72.38 118.05 135.15 104.73 312.76 54.77 78.73 297.49 199.15 281.04 292.85 122.66 67.67 65.77 357.01 288.65 594.47 50 E10a_E11b KnownJunction 0 0.00 0.00 0.00 1.40 0.00 0.00 0.00 0.00 1.79 0.00 2.16 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 3.15 0.00 20.32 51 ER11a ExonRegion 0 16.56 40.70 137.95 37.35 40.44 125.62 47.81 112.41 123.49 90.64 270.86 33.73 58.55 305.83 187.93 266.10 205.45 93.55 75.27 71.04 316.09 208.45 467.68 52 E11_Ab KnownBoundary 0 31.19 42.36 117.06 49.68 28.61 143.44 68.19 111.68 130.58 88.67 208.47 18.91 100.32 319.86 219.79 306.07 204.11 86.51 102.03 91.59 301.84 195.15 422.04 53 ER11b ExonRegion 1 17.52 29.88 143.10 45.54 24.38 113.59 63.77 133.86 133.36 114.34 225.77 14.55 76.86 278.63 181.73 245.70 201.17 100.45 84.59 80.79 344.15 191.39 445.39 54 E11_Da KnownBoundary 0 21.34 38.87 140.71 51.34 44.14 117.66 76.22 137.35 119.21 113.55 230.01 24.01 77.59 236.92 144.76 248.31 214.87 125.98 84.71 76.06 364.61 172.07 486.48 55 ER11c ExonRegion 1 19.49 55.81 204.41 69.81 49.13 135.02 78.64 146.96 161.73 108.62 319.09 29.00 77.77 297.21 266.92 267.28 273.71 112.80 108.75 103.19 406.81 233.86 569.74 56 E11b_E12a KnownJunction 0 46.97 86.63 270.48 88.80 42.36 172.63 87.18 188.37 216.46 150.24 431.53 42.31 126.78 353.58 352.43 421.68 285.27 181.61 170.26 129.75 431.76 386.44 724.05 57 ER12a ExonRegion 0 53.52 61.94 266.06 123.98 64.03 153.51 80.40 224.24 225.02 159.46 453.52 96.99 133.32 386.71 341.25 512.78 383.28 235.64 177.94 128.69 514.81 365.21 904.38 58 E12a_E13a KnownJunction 0 66.09 73.67 360.45 149.07 74.70 139.07 86.60 303.17 328.18 181.53 506.81 111.19 187.65 432.52 451.33 753.82 473.68 286.77 227.21 177.56 607.52 528.87 1175.79 59 ER13a ExonRegion 0 55.21 63.24 386.47 137.44 100.71 176.63 92.23 313.47 306.83 210.35 609.04 153.17 238.80 442.14 423.82 518.43 453.40 233.85 182.99 174.27 671.38 467.42 879.01 60 E13_Da KnownBoundary 1 23.71 6.05 17.03 19.78 11.29 21.98 6.76 26.90 6.57 12.89 10.48 0.00 35.71 13.19 26.33 38.28 25.53 13.93 4.42 5.88 20.45 11.27 60.01 61 E13a_E14a KnownJunction 0 101.28 71.96 328.20 148.23 89.47 149.40 125.42 304.89 262.01 206.03 418.68 130.24 299.01 313.79 342.42 298.38 282.19 176.43 105.79 153.98 596.58 339.91 662.42 62 ER13b ExonRegion 0 15.90 13.85 17.95 16.84 18.34 17.06 19.50 12.65 11.27 12.00 14.13 15.23 24.55 21.75 24.88 31.35 22.10 17.25 19.51 18.66 15.98 15.62 54.09 63 E13_Db NovelBoundary 0 23.86 18.62 22.12 17.41 35.91 16.01 26.50 9.78 12.73 17.70 17.37 0.00 21.59 4.83 10.75 40.16 4.58 5.18 21.08 25.63 11.24 10.65 67.78 64 I13 Intron 0 14.93 6.64 12.88 11.02 13.07 5.97 4.31 11.18 7.49 7.42 15.21 5.25 9.50 14.93 18.24 27.41 11.64 10.71 11.23 7.50 17.31 14.13 47.00 65 I13_SR1 SilentIntronRegion 0 14.99 6.68 12.94 11.08 13.14 6.00 4.33 11.24 7.53 7.46 15.29 5.28 9.56 15.01 18.34 27.56 11.70 10.77 11.29 7.54 17.41 14.21 47.25 66 E14_Aa NovelBoundary 0 36.08 8.95 22.47 19.48 7.72 5.79 4.50 10.39 8.25 12.06 9.00 5.55 13.80 30.73 8.90 8.12 0.00 6.67 4.80 9.20 7.91 7.04 23.22 67 ER14a ExonRegion 0 73.37 79.21 302.05 121.77 76.26 148.97 96.43 253.39 268.53 166.74 502.75 172.89 317.98 380.59 446.41 611.51 393.30 222.22 219.37 167.94 565.03 528.31 1080.59 68 E14a_E15a KnownJunction 0 41.34 91.50 355.22 126.52 72.33 211.87 93.89 286.08 289.67 170.95 398.94 134.29 259.56 305.43 565.18 579.34 304.07 206.56 315.59 144.13 392.84 745.46 1026.75 69 ER15a ExonRegion 0 23.86 70.53 301.53 108.37 97.22 252.26 101.72 248.32 274.27 171.84 454.41 157.89 247.36 381.94 413.87 401.91 323.19 141.49 159.75 138.91 540.51 449.95 671.69 70 E15a_E16b KnownJunction 0 21.63 113.07 398.83 144.17 199.58 367.69 140.35 325.64 351.76 208.53 557.98 296.20 278.07 454.18 369.00 469.02 391.02 179.70 145.60 127.51 703.64 368.69 653.37 71 E16_Aa NovelBoundary 1 1320.68 1465.73 3832.89 3495.79 1197.03 981.14 1315.12 3859.24 4047.44 2842.53 576.41 370.17 290.57 195.01 596.70 1571.30 1155.49 4406.08 1429.31 1455.33 809.72 914.46 2005.18 72 ER16a ExonRegion 0 3.51 4.03 10.63 5.84 8.20 10.29 7.07 5.87 5.50 4.02 3.71 6.21 4.16 6.51 16.37 10.13 8.05 7.90 4.85 6.34 12.55 8.41 29.14 73 E16_Ab KnownBoundary 0 0.00 0.00 17.95 19.71 10.44 7.89 3.53 4.03 9.92 4.16 0.00 11.55 0.00 4.71 0.00 12.13 4.77 8.12 0.00 12.14 11.37 2.69 30.90 74 ER16b ExonRegion 0 43.40 72.18 397.46 151.63 91.28 196.98 83.95 317.19 378.37 231.09 601.44 201.76 394.20 513.31 575.77 655.18 417.65 277.14 256.03 156.89 706.47 687.79 1230.25 75 E16a_E17a KnownJunction 0 68.01 59.79 446.08 149.90 94.99 139.18 97.47 301.77 383.33 219.44 647.85 118.39 350.30 442.64 423.14 355.72 450.30 151.76 169.32 117.42 735.46 391.10 617.26 76 ER17a ExonRegion 0 61.49 71.65 431.62 139.60 116.83 174.83 120.50 291.55 370.51 222.48 660.57 133.67 383.66 542.51 419.90 431.60 480.87 189.13 180.54 127.39 707.23 389.95 828.55 77 E17a_E18a KnownJunction 0 84.98 109.52 476.06 165.71 188.12 277.91 211.63 317.30 373.09 215.59 609.52 163.55 338.29 571.31 454.29 556.18 516.13 232.55 225.79 172.96 678.25 490.91 1041.60 78 ER18a ExonRegion 0 85.72 76.30 445.40 142.28 88.98 238.86 103.64 329.78 357.09 237.82 548.02 139.48 363.55 510.47 513.40 561.90 464.23 212.08 181.96 141.32 606.99 500.12 1038.15 79 E18_Da NovelBoundary 0 61.05 62.03 367.14 98.92 62.82 172.40 61.78 236.38 244.62 132.03 349.09 110.29 262.16 427.28 384.82 450.05 316.69 174.89 203.39 118.25 464.20 262.26 818.03 80 E18b_E19a KnownJunction 0 56.97 87.55 472.90 143.84 63.50 173.25 53.13 297.66 335.04 209.60 539.93 87.78 338.94 516.51 561.35 631.37 346.14 257.38 278.69 132.37 522.27 553.67 1102.55 81 ER18b ExonRegion 0 52.38 71.48 439.85 124.77 54.99 173.84 56.86 276.38 302.05 178.86 467.18 116.90 315.64 524.67 520.05 593.53 383.40 218.31 254.67 126.60 558.64 444.62 1010.06 82 ER19a ExonRegion 0 33.62 70.41 290.81 83.78 51.94 132.04 58.73 195.18 200.44 154.53 392.47 75.51 255.05 338.21 351.27 350.51 296.13 162.47 129.21 77.68 485.18 313.35 628.30 83 E19_Da KnownBoundary 0 44.90 80.58 385.00 97.66 58.49 204.37 65.27 257.00 300.14 233.13 403.58 66.62 206.97 464.89 448.11 362.21 299.20 286.44 133.93 106.29 513.43 396.06 679.58 84 ER19b ExonRegion 0 36.54 47.53 176.46 75.85 80.17 134.57 57.92 134.50 127.64 83.98 286.74 33.30 71.66 285.32 248.75 286.03 251.64 86.96 156.69 52.59 377.35 215.59 549.39