Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PDAP1	Gene	0	92.25	109.06	263.89	192.07	214.55	301.72	147.87	162.80	88.15	214.65	298.43	95.02	67.63	293.60	330.25	256.16	251.05	180.01	177.94	143.30	224.33	149.79	152.56
2	350498	Transcript	0	78.93	70.22	251.42	152.73	145.93	131.43	83.85	122.87	78.53	169.89	276.96	67.15	60.07	199.45	261.49	158.33	213.32	110.11	116.31	104.26	208.98	83.46	85.94
3	426447	Transcript	0	10.18	9.17	17.26	14.34	16.50	13.10	17.60	9.03	6.29	14.31	23.79	6.91	4.47	15.74	21.60	18.47	17.84	6.69	11.91	16.89	16.63	7.79	8.04
4	488214	Transcript	0	4.46	2.69	4.58	4.53	3.71	2.88	4.49	6.36	2.30	5.21	3.75	2.88	3.51	4.10	4.29	2.82	7.16	1.77	1.13	6.58	1.58	1.88	4.51
5	496335	Transcript	0	15.20	1.01	2.51	4.03	3.98	3.42	2.15	2.23	1.60	0.87	4.08	0.88	1.91	7.88	13.37	12.53	4.92	0.35	2.38	0.53	2.75	2.07	5.13
6	ER1a	ExonRegion	0	3.23	5.12	3.58	2.80	8.21	21.79	14.76	3.15	4.10	7.56	20.49	1.17	3.15	19.04	21.47	17.00	12.54	3.05	15.13	8.21	12.63	4.86	7.44
7	E1_Ab	KnownBoundary	0	20.60	28.61	12.42	9.92	34.89	94.26	36.66	4.76	10.19	28.34	73.02	12.00	13.47	68.40	118.80	68.27	43.95	17.16	77.08	20.07	47.94	19.41	35.34
8	ER1b	ExonRegion	1	293.76	375.31	115.57	107.42	609.53	1442.01	468.98	72.34	55.05	127.67	544.97	5.29	9.21	324.55	314.36	420.06	387.67	252.12	290.75	150.59	331.98	173.43	277.24
9	E1a_E2a	KnownJunction	1	666.41	818.93	287.87	248.69	1810.10	2580.05	1225.65	187.05	110.16	264.51	701.49	12.60	33.93	336.34	495.46	959.49	423.28	525.92	549.10	281.56	396.12	158.84	561.69
10	E2_Ab	NovelBoundary	1	413.63	552.53	271.78	281.68	1563.07	1866.37	1384.63	173.17	113.89	244.26	340.30	11.70	44.48	163.52	322.27	933.34	290.60	530.19	712.02	229.21	263.79	121.92	535.06
11	ER2a	ExonRegion	1	527.19	744.63	308.39	300.06	1787.18	2645.10	1358.05	187.54	132.88	298.48	727.58	14.07	57.84	336.46	547.61	1174.73	476.43	678.43	764.49	314.01	450.29	201.23	705.28
12	ER2b	ExonRegion	1	245.81	345.71	416.27	321.64	1017.59	1227.91	731.85	202.49	143.38	304.29	441.45	121.71	106.35	249.44	349.06	705.99	340.20	503.79	494.45	207.39	331.63	152.15	367.74
13	E2a_E3a	KnownJunction	0	0.00	2.57	3.31	3.76	0.00	0.00	4.50	1.93	0.00	2.69	0.00	0.00	0.00	0.00	6.30	0.00	0.00	0.00	0.00	6.33	3.15	0.00	0.00
14	E2a_E3b	KnownJunction	0	145.36	125.57	549.71	311.58	282.17	223.11	161.11	218.14	155.03	309.56	580.52	136.99	127.75	361.47	469.13	268.99	446.66	209.55	212.71	184.53	443.50	101.59	131.12
15	E2b_E3b	KnownJunction	0	0.00	0.00	0.00	1.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER2c	ExonRegion	0	0.53	0.00	2.45	0.34	2.68	0.46	4.63	3.89	0.00	0.29	4.35	3.25	0.00	3.25	2.90	0.74	0.00	0.00	0.80	2.13	3.31	0.00	3.67
17	I2_AR1	ActiveIntronRegion	0	8.68	26.64	22.18	32.71	23.28	6.79	12.31	26.79	21.24	39.11	16.43	12.12	0.00	19.33	36.85	21.10	17.16	17.00	1.91	27.23	9.04	10.42	9.10
18	I2_AR2	ActiveIntronRegion	0	26.27	22.97	17.22	22.61	26.09	21.02	20.82	17.55	15.09	35.98	18.77	11.32	7.72	24.75	29.57	22.74	17.94	15.97	10.29	15.29	9.65	9.50	15.41
19	E3_Aa	NovelBoundary	0	97.13	62.16	31.25	50.31	86.59	65.64	69.03	37.17	27.31	38.98	7.32	13.65	19.80	42.50	45.37	56.57	21.97	21.35	28.14	36.50	12.54	11.94	22.45
20	E3_Ab	NovelBoundary	0	52.08	26.90	37.96	26.70	84.89	33.73	62.58	37.95	19.10	35.38	29.90	12.60	15.10	34.38	63.04	58.02	30.67	10.11	17.69	27.42	5.56	21.98	20.06
21	ER3a	ExonRegion	0	20.36	15.78	31.22	24.92	33.00	26.20	30.70	16.13	12.59	25.94	47.59	13.81	8.93	31.48	36.89	36.94	35.68	13.37	23.81	27.46	30.12	15.58	16.08
22	ER3b	ExonRegion	0	87.19	134.44	771.07	513.81	189.60	307.58	164.05	399.69	223.69	543.46	925.82	155.13	109.36	668.53	623.85	573.23	793.17	440.89	517.19	370.19	700.45	318.76	361.81
23	E3_Da	KnownBoundary	0	25.19	6.12	28.33	30.17	8.66	5.79	13.87	19.10	15.02	24.20	7.53	19.21	14.77	12.30	14.09	20.59	17.39	8.25	13.37	23.33	4.82	5.82	16.65
24	E3a_E4a	KnownJunction	0	102.54	187.80	923.92	785.81	570.12	676.32	252.65	544.60	279.42	680.90	893.17	387.43	230.67	767.68	959.39	1262.83	726.69	775.63	790.80	446.46	670.35	449.88	669.76
25	ER3c	ExonRegion	0	12.86	8.06	11.29	11.74	8.46	8.20	8.83	15.19	6.89	15.33	6.90	5.40	10.54	9.04	9.96	7.71	21.48	5.32	2.60	17.60	1.44	5.63	9.86
26	I3	Intron	0	22.54	14.33	24.56	28.62	12.64	9.10	14.95	16.50	13.26	20.11	9.59	8.56	7.13	9.68	12.09	17.61	12.16	24.85	11.48	18.74	12.53	10.01	11.99
27	I3_SR1	SilentIntronRegion	0	22.61	14.37	24.63	28.71	12.68	9.13	14.99	16.55	13.30	20.18	9.62	8.59	7.16	9.71	12.12	17.65	12.20	24.92	11.51	18.80	12.57	10.04	12.03
28	ER4a	ExonRegion	0	82.21	320.01	978.76	707.43	1187.35	1958.00	862.45	493.42	275.13	625.40	917.67	475.00	374.74	1043.72	1004.62	959.97	790.70	700.13	615.17	446.98	731.23	383.15	544.68
29	E4_Da	NovelBoundary	0	33.41	6.12	70.49	58.40	24.19	43.10	21.64	37.30	22.16	35.27	47.12	5.25	6.82	29.78	53.28	15.12	36.93	29.89	22.02	23.01	32.56	26.33	15.96
30	E4a_E5a	KnownJunction	0	159.66	710.33	870.43	583.08	1049.24	2284.76	1351.07	481.96	290.39	686.65	967.30	316.15	177.42	764.85	702.52	602.49	900.33	519.74	458.08	358.38	869.95	362.87	341.54
31	I4	Intron	0	17.86	16.92	38.53	38.16	21.44	29.84	25.72	30.03	16.99	34.14	22.29	13.00	10.45	23.64	26.91	31.94	29.46	42.22	23.50	24.28	24.01	24.29	26.57
32	I4_SR1	SilentIntronRegion	0	20.06	18.46	50.78	44.75	30.12	25.90	23.25	30.58	17.74	33.26	25.36	16.53	12.58	24.63	27.67	29.77	29.55	35.47	28.55	33.60	24.29	23.77	29.92
33	I4_AR1	ActiveIntronRegion	0	19.96	15.11	50.24	37.58	22.55	34.84	18.91	33.33	23.82	33.10	27.06	8.66	16.08	27.38	26.53	20.38	46.21	46.72	57.34	41.34	28.33	29.47	39.85
34	I4_AR2	ActiveIntronRegion	1	21.49	20.96	43.86	30.40	10.09	19.61	25.29	30.67	22.42	29.73	25.87	12.99	20.44	34.77	31.10	21.49	51.63	37.48	35.12	32.68	21.08	19.55	32.83
35	I4_AR3	ActiveIntronRegion	0	17.57	18.39	34.99	34.09	18.26	30.16	27.38	27.52	16.53	34.54	22.09	11.15	7.15	22.57	26.38	32.82	29.74	44.83	19.87	19.64	23.69	23.38	28.42
36	I4_SR2	SilentIntronRegion	0	16.95	14.10	36.68	40.82	22.12	32.08	25.01	32.96	16.80	34.49	20.84	13.74	12.91	23.79	27.05	32.81	27.42	42.60	24.53	24.98	24.53	26.04	22.06
37	E5_Aa	NovelBoundary	0	23.93	23.68	66.53	57.44	56.37	56.62	44.03	54.09	23.87	37.23	22.22	18.61	35.22	43.79	46.48	0.00	25.06	32.25	32.28	36.43	31.32	28.29	23.22
38	ER5a	ExonRegion	0	145.69	407.62	731.46	564.87	302.21	820.66	472.41	432.69	234.60	547.60	886.23	288.87	107.87	670.28	601.47	424.52	772.47	514.29	338.42	322.42	685.15	330.16	252.39
39	E5_Ab	KnownBoundary	1	268.34	301.53	706.78	645.77	151.53	288.58	166.58	449.31	209.63	487.38	829.26	396.13	112.65	757.67	785.46	506.28	656.38	521.65	383.73	375.64	554.08	343.83	294.50
40	ER5b	ExonRegion	0	241.65	190.53	695.47	529.43	221.30	301.77	156.75	374.53	190.91	493.52	613.60	362.31	214.69	860.88	873.48	566.55	580.28	550.16	425.86	321.41	478.86	316.14	317.70
41	E5_Da	NovelBoundary	0	26.00	26.64	72.88	60.66	58.57	48.95	41.56	21.15	11.23	46.26	44.64	17.26	0.00	59.98	46.36	47.85	56.10	40.79	21.55	70.37	42.26	19.04	22.45
42	E5a_E6a	KnownJunction	0	370.66	250.55	750.45	513.82	369.78	505.73	316.34	418.75	238.25	544.79	851.16	289.44	210.38	1314.45	1173.38	727.33	890.60	488.36	629.76	372.51	721.37	455.76	312.69
43	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	I5	Intron	0	24.65	18.85	76.48	72.78	26.79	49.62	36.68	37.41	23.26	51.25	32.57	13.01	12.84	48.14	47.64	45.22	33.05	47.58	27.15	35.23	29.15	26.13	34.06
45	I5_AR1	ActiveIntronRegion	0	24.70	18.88	76.63	72.92	26.84	49.72	36.75	37.48	23.30	51.35	32.63	13.04	12.86	48.23	47.73	45.30	33.11	47.66	27.21	35.30	29.21	26.18	34.12
46	E6_Aa	NovelBoundary	0	23.93	18.35	122.05	67.89	31.83	74.05	56.93	48.34	32.78	69.33	26.11	0.00	18.99	67.93	46.11	46.23	59.19	41.58	55.15	26.91	47.38	30.74	30.73
47	ER6a	ExonRegion	0	112.01	150.93	382.47	280.70	176.28	305.90	157.58	211.89	114.38	280.10	424.15	161.50	89.41	587.01	518.14	346.02	427.54	239.28	269.69	210.85	325.36	213.65	190.55
48	E6_Da	KnownBoundary	0	25.19	44.60	25.49	15.05	65.70	106.59	86.74	17.70	11.34	21.17	66.81	61.67	24.84	194.48	188.02	135.43	100.61	32.21	74.36	55.99	89.76	51.99	52.41
49	ER6b	ExonRegion	0	88.19	79.97	200.95	143.82	147.43	149.38	75.68	147.31	76.45	192.56	229.87	63.29	49.32	217.83	293.87	189.00	180.75	117.74	121.08	120.05	170.79	143.92	119.25
50	E6_Db	NovelBoundary	0	87.57	31.57	97.84	42.79	97.62	88.76	40.81	71.02	38.34	82.63	42.06	18.76	13.15	35.96	38.07	61.01	53.20	11.40	7.15	24.29	43.99	70.60	73.07
51	E7_Aa	NovelBoundary	1	737.39	27.50	187.37	81.71	189.64	150.31	92.04	187.67	116.67	97.21	1693.69	101.58	307.45	2735.84	2306.45	1419.29	955.59	45.85	25.88	50.75	1516.08	514.12	517.56
52	ER7a	ExonRegion	0	0.21	0.00	0.25	0.22	0.13	0.06	0.16	0.05	0.16	0.16	0.04	0.17	0.05	0.71	0.06	0.56	0.07	0.06	0.06	0.00	0.20	0.02	0.15
53	E7_Da	NovelBoundary	1	601.29	13.22	178.05	81.18	151.70	148.15	128.73	175.63	116.29	99.39	1906.48	203.17	156.65	2552.31	2226.97	1449.19	972.14	28.27	40.57	36.37	1293.74	465.50	474.62
54	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	Ix	Intron	0	40.35	5.68	21.29	15.78	14.30	14.25	9.97	18.14	17.66	16.61	21.59	6.57	8.01	34.25	30.95	38.98	20.04	12.38	9.28	5.68	25.42	10.38	10.34
56	Ix_AR1	ActiveIntronRegion	0	42.69	6.01	22.52	16.70	15.12	15.07	10.54	19.19	18.68	17.57	22.84	6.95	8.47	36.23	32.74	41.24	21.20	13.09	9.82	6.01	26.89	10.98	10.94
57	E8_Aa	NovelBoundary	0	77.27	15.79	19.43	17.28	44.31	2.73	24.51	19.10	13.11	18.16	62.65	13.80	26.78	37.91	48.71	113.99	56.66	14.47	0.00	6.52	36.70	5.45	12.21
58	ER8a	ExonRegion	0	60.60	4.03	9.78	15.90	15.77	13.62	8.45	8.88	6.22	3.32	16.27	3.36	7.60	30.80	53.43	49.55	19.61	1.36	9.46	2.11	10.80	8.25	20.36