Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RUNDC3B Gene 0 4.42 130.55 56.47 44.51 114.30 320.30 48.48 89.56 77.69 48.38 1.57 2.07 1.15 0.16 0.09 0.26 0.86 7.28 0.86 59.76 0.10 0.47 0.13 2 466676 Transcript 0 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 497788 Transcript 0 0.00 0.01 0.25 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 338056 Transcript 0 0.00 3.00 2.66 0.45 5.26 9.37 1.28 2.02 1.44 0.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 1.77 0.00 0.00 0.00 5 476114 Transcript 0 0.00 2.71 0.00 0.91 0.00 0.20 1.18 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.65 0.00 0.00 0.00 6 493037 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 394654 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 489461 Transcript 0 0.00 0.00 0.00 0.00 0.86 0.59 0.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.00 0.00 0.00 9 312373 Transcript 0 0.00 15.59 7.35 5.00 11.15 32.09 8.16 7.20 11.32 8.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.53 18.79 0.00 0.00 0.00 10 496000 Transcript 0 15.90 1.94 0.18 0.20 2.90 1.87 2.89 0.77 0.18 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.85 0.00 0.00 0.00 11 ER1a ExonRegion 0 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 0.01 0.50 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 0.00 1.93 0.42 0.00 3.38 10.18 2.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.00 0.00 0.00 0.00 0.00 16 E3_Ab KnownBoundary 0 0.00 3.16 3.46 2.06 0.00 15.84 4.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E3_Ac KnownBoundary 0 0.00 0.00 1.33 0.00 7.64 18.40 0.00 0.00 1.53 4.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.81 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 0 0.00 4.07 1.23 0.00 8.03 22.01 2.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.31 0.00 0.00 0.00 0.00 0.00 19 ER3c ExonRegion 0 0.00 3.31 1.61 0.00 1.55 12.31 1.11 0.00 0.58 0.06 0.70 0.00 0.00 0.00 0.65 0.00 0.00 1.56 0.00 2.78 0.00 0.00 0.00 20 E3_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 21 ER3d ExonRegion 0 0.00 30.18 6.69 3.99 8.38 56.97 6.86 10.74 13.26 13.90 0.26 0.00 0.00 0.00 0.00 0.00 0.51 13.25 0.00 26.37 0.68 0.00 0.20 22 E3a_E5a KnownJunction 0 0.00 110.05 15.37 19.21 34.21 161.10 20.49 20.74 23.93 28.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.24 0.00 44.17 0.00 0.00 4.35 23 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 1.73 1.18 0.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.27 0.00 0.00 0.00 24 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER5a ExonRegion 0 0.00 85.38 36.16 16.52 44.45 213.80 33.33 37.65 48.15 33.34 0.85 0.00 0.00 0.00 0.00 0.00 0.00 17.81 0.74 75.16 0.00 0.92 0.71 26 E5a_E6a KnownJunction 0 0.00 15.66 1.83 7.92 8.32 13.23 0.00 1.81 9.66 5.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.72 0.00 12.08 0.00 0.00 0.00 27 E5a_E7b KnownJunction 0 0.00 95.31 43.70 17.91 59.68 179.04 31.44 45.55 65.68 44.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.63 4.80 92.23 0.00 0.00 0.00 28 ER6a ExonRegion 0 0.00 7.30 1.18 6.68 4.25 9.03 3.32 0.54 10.24 4.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.30 0.00 9.51 0.00 0.00 0.00 29 E6a_E7b KnownJunction 0 0.00 3.16 0.00 5.39 0.00 13.57 3.80 0.00 10.94 4.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 6.46 0.00 0.00 0.00 30 ER7a ExonRegion 0 0.00 15.59 7.35 5.00 11.15 32.09 8.16 7.20 11.32 8.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.53 18.79 0.00 0.00 0.00 31 ER7b ExonRegion 0 1.67 126.95 38.77 24.86 86.74 207.30 42.53 55.04 71.12 48.84 0.00 0.97 0.00 0.00 0.00 0.35 0.00 13.84 1.14 77.98 0.00 0.00 1.16 32 E7b_E9a KnownJunction 0 0.00 155.04 35.98 34.03 83.96 282.34 54.63 82.68 91.06 57.03 0.00 6.00 0.00 0.00 0.00 4.27 0.00 12.77 9.41 134.23 0.00 0.00 0.00 33 ER7c ExonRegion 0 0.00 137.77 34.62 28.62 74.92 237.02 40.38 73.89 86.15 53.33 0.00 4.33 0.00 0.00 0.00 2.97 0.00 12.93 3.19 117.02 0.00 0.00 0.00 34 ER7d ExonRegion 0 0.00 2.71 0.00 0.91 0.00 0.20 1.18 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.65 0.00 0.00 0.00 35 ER8a ExonRegion 0 3.79 1.12 0.36 0.40 1.97 0.85 1.67 1.53 0.37 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.54 0.00 1.69 0.00 0.00 0.00 36 E8a_E9a KnownJunction 0 28.00 2.76 0.00 0.00 3.82 2.90 4.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER9a ExonRegion 0 3.69 114.54 35.18 34.55 74.92 352.24 56.78 79.79 88.44 49.40 0.00 0.45 0.00 0.00 0.00 1.11 0.00 9.48 0.89 101.06 0.00 0.00 0.00 38 E9a_E10a KnownJunction 0 0.00 141.42 37.40 36.33 151.44 429.41 78.61 75.62 85.13 39.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.20 0.00 70.31 0.00 0.00 0.00 39 ER10a ExonRegion 0 4.68 98.02 24.49 28.06 107.36 321.71 61.33 70.52 84.54 47.99 0.00 1.88 0.00 0.00 0.00 0.00 0.00 12.15 0.00 96.31 0.00 0.00 0.00 40 E10a_E11a KnownJunction 0 0.00 118.99 41.90 38.92 166.38 416.12 65.27 73.15 120.34 69.81 0.00 0.00 0.00 0.00 0.00 4.19 0.00 16.33 0.00 125.28 0.00 0.00 0.00 41 ER11a ExonRegion 0 3.04 88.75 37.55 30.44 114.92 359.14 44.13 67.14 106.92 65.79 0.00 0.33 0.00 0.00 0.00 0.00 0.00 17.62 0.00 106.22 0.00 0.00 0.00 42 E11_Da KnownBoundary 0 6.22 92.02 47.57 40.29 96.94 370.58 43.19 74.84 111.75 70.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.16 0.00 102.91 0.00 0.00 0.00 43 ER11b ExonRegion 0 2.77 72.37 35.06 30.58 66.76 311.65 49.02 65.73 87.00 60.84 1.93 0.00 0.00 0.00 0.00 0.00 0.00 16.39 0.00 103.71 0.00 0.96 0.00 44 E11c_E12a KnownJunction 0 0.00 86.76 33.85 37.39 98.47 382.56 60.15 64.81 79.48 57.54 4.95 0.00 0.00 0.00 0.00 0.00 0.00 17.74 0.00 129.05 0.00 3.12 0.00 45 ER11c ExonRegion 0 0.00 77.28 34.31 37.25 79.38 335.59 59.14 62.22 76.58 59.26 3.87 0.00 0.00 0.00 0.00 0.00 0.00 14.78 0.00 117.02 0.00 2.08 0.00 46 ER12a ExonRegion 0 1.40 78.57 24.65 40.30 107.90 349.45 54.70 76.95 89.01 57.36 4.04 0.00 0.00 0.00 0.00 0.00 0.00 15.53 0.00 114.01 0.00 0.81 0.00 47 E12_Da KnownBoundary 0 0.00 100.31 29.27 37.52 96.60 356.10 57.19 88.88 94.94 55.74 5.37 0.00 0.00 0.00 0.00 0.00 0.00 12.89 0.00 90.38 0.00 0.00 0.00 48 ER12b ExonRegion 0 4.39 94.21 31.71 31.72 100.43 365.60 59.23 77.87 93.24 59.83 5.42 0.00 0.00 0.00 0.00 0.00 0.00 14.10 3.53 100.37 0.00 0.32 0.00 49 E12b_E13a KnownJunction 0 6.82 115.37 40.24 37.96 135.14 394.55 69.11 93.11 125.14 65.54 2.37 0.00 0.00 0.00 0.00 0.00 0.00 14.80 0.00 99.71 0.00 2.76 0.00 50 ER13a ExonRegion 0 9.60 78.37 35.75 41.00 119.14 414.14 62.48 91.38 109.37 57.05 3.11 0.00 0.00 0.00 0.00 0.00 1.11 11.36 1.61 99.91 0.00 0.76 0.00 51 E13a_E14a KnownJunction 0 23.71 55.71 29.86 45.75 174.28 464.90 60.50 65.39 110.07 58.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.27 4.80 86.67 0.00 6.06 0.00 52 E13a_E15a KnownJunction 0 0.00 34.47 20.52 17.78 64.77 132.82 21.11 42.88 29.83 15.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.60 9.60 41.16 0.00 0.00 0.00 53 ER14a ExonRegion 0 3.96 54.52 37.35 34.98 81.29 336.20 40.30 76.98 84.19 42.19 0.67 0.00 0.00 0.00 0.71 1.03 2.25 10.11 0.50 92.47 0.00 0.45 0.00 54 E14a_E15a KnownJunction 0 12.74 53.67 43.08 26.94 111.12 305.56 67.35 72.78 71.32 35.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.20 0.00 76.89 0.00 0.00 0.00 55 ER15a ExonRegion 0 10.50 117.40 62.67 42.08 119.75 392.09 65.60 122.99 115.79 65.43 1.20 0.00 0.00 0.00 0.00 1.27 0.00 19.10 2.64 118.17 0.00 1.72 0.00 56 E15a_E16a KnownJunction 0 16.97 147.28 40.92 32.13 106.62 343.84 68.85 108.15 110.59 58.67 2.68 5.25 0.00 0.00 0.00 0.00 0.00 7.01 0.00 100.93 0.00 0.00 0.00 57 ER16a ExonRegion 0 8.66 221.21 61.18 49.78 203.95 453.66 86.07 118.19 105.15 64.51 1.45 4.90 1.38 0.24 0.00 0.26 2.06 7.93 0.00 58.83 0.00 1.11 0.00 58 E16_Da KnownBoundary 0 0.00 158.20 17.24 16.68 48.47 205.17 43.01 43.99 39.79 19.99 0.00 12.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.72 0.00 0.00 0.00 59 ER16b ExonRegion 0 1.64 245.57 36.55 50.71 153.35 395.12 62.61 94.29 55.90 46.31 0.20 13.73 7.12 0.00 0.00 0.00 0.46 3.63 0.00 72.60 0.00 0.00 0.00 60 E16_Db KnownBoundary 0 6.67 277.12 53.46 79.91 255.26 483.53 77.99 154.73 84.58 73.06 0.00 0.00 13.64 0.00 0.00 4.36 3.65 6.92 0.00 91.98 0.00 0.00 0.00 61 ER16c ExonRegion 0 5.47 203.06 103.97 78.94 171.83 473.20 64.66 146.43 112.44 70.77 2.60 3.24 2.36 0.33 0.12 0.34 1.22 5.22 1.55 71.02 0.13 0.54 0.17 62 ER16d ExonRegion 0 0.00 4.07 4.90 0.91 7.14 8.56 0.44 4.03 2.88 1.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.55 0.00 0.00 0.00