Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RHBDD2 Gene 0 78.57 79.73 272.17 141.48 126.90 236.79 109.51 287.96 440.65 223.21 137.86 35.33 41.97 117.67 120.86 117.42 85.27 289.94 288.43 179.46 186.50 224.93 233.88 2 466232 Transcript 0 1.46 0.00 0.00 0.00 0.46 0.00 0.49 0.02 0.00 0.03 0.70 0.06 0.00 0.08 0.01 0.54 0.00 0.09 0.05 0.00 0.02 0.37 1.06 3 468644 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.02 0.00 3.04 0.00 0.00 0.00 0.00 0.00 0.04 0.02 0.00 0.01 0.59 0.00 4 6777 Transcript 0 0.04 0.43 0.00 0.00 0.00 5.64 1.65 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.79 5 318622 Transcript 0 19.05 5.29 12.25 10.63 3.21 5.13 10.06 17.28 10.37 6.65 0.77 0.00 0.00 1.62 5.80 8.32 6.60 0.00 7.01 4.68 4.41 5.42 5.87 6 454791 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 452362 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 413229 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 476218 Transcript 0 0.00 0.85 0.01 1.38 2.27 2.28 2.81 0.92 0.61 0.95 2.61 0.00 1.64 1.71 0.00 0.00 1.40 0.03 2.87 0.20 2.77 1.82 6.36 10 468304 Transcript 0 0.00 0.00 0.00 0.00 3.23 0.00 0.00 2.51 1.56 0.00 4.47 7.65 0.00 4.71 4.45 3.42 8.51 0.00 0.00 0.00 16.00 14.57 8.28 11 428119 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 467406 Transcript 0 3.46 0.88 1.64 0.00 1.18 1.65 2.63 0.23 1.46 0.46 2.10 1.83 1.66 5.23 2.78 7.48 5.87 0.02 2.06 0.48 4.95 2.12 5.23 13 470957 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 ER1a ExonRegion 0 2.92 0.00 0.00 0.00 0.92 0.00 0.98 0.05 0.00 0.07 1.40 0.12 0.00 0.15 0.02 1.08 0.00 0.19 0.11 0.00 0.04 0.73 2.12 15 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.04 0.00 6.09 0.00 0.00 0.00 0.00 0.00 0.08 0.03 0.00 0.02 1.17 0.00 17 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.04 0.43 0.00 0.00 0.00 5.64 1.65 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.79 19 E3_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 4.83 1.94 0.00 1.27 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E3_Ac KnownBoundary 0 0.00 3.03 0.00 2.00 0.00 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.37 0.00 4.18 21 ER3b ExonRegion 0 2.12 2.44 0.00 0.00 3.21 20.17 6.88 0.00 0.49 0.00 4.25 0.00 0.00 1.62 4.06 0.59 0.00 0.37 1.27 1.28 7.93 0.83 4.11 22 ER3c ExonRegion 1 13.45 21.99 2.37 0.34 21.13 87.03 54.97 1.44 8.34 1.08 16.79 0.00 0.00 8.86 27.14 11.15 14.85 8.89 19.84 14.72 42.61 15.67 30.28 23 E3_Ad KnownBoundary 0 60.01 39.86 43.97 8.89 60.87 301.76 130.72 42.14 63.86 34.14 36.01 0.00 0.00 20.07 26.70 39.56 27.96 67.40 107.30 37.97 93.53 51.07 96.55 24 ER3d ExonRegion 1 70.16 60.15 46.31 13.15 81.61 265.05 130.12 28.97 55.92 50.41 29.94 1.82 18.28 38.92 78.83 43.81 34.36 52.98 117.89 61.87 76.60 88.10 131.48 25 E3_Ae KnownBoundary 0 41.12 69.92 74.86 23.44 53.06 160.65 55.03 50.48 74.39 69.65 21.37 5.55 19.48 28.37 68.98 40.93 13.18 76.27 110.03 72.23 43.06 38.09 95.18 26 E3_Af KnownBoundary 1 14.52 36.11 86.78 39.16 11.38 18.28 12.90 63.21 111.80 57.24 62.65 6.30 21.91 23.60 32.63 19.99 75.55 64.75 21.46 48.77 176.75 35.09 54.97 27 ER3e ExonRegion 0 22.42 53.95 94.55 29.26 31.11 80.00 29.95 61.47 110.74 71.36 44.58 4.06 15.98 25.63 38.99 26.19 45.28 77.43 64.01 62.37 115.90 37.31 64.42 28 ER3f ExonRegion 0 5.05 21.45 148.84 62.03 18.97 41.57 18.17 120.85 246.69 134.12 155.69 21.06 22.81 81.45 77.02 62.45 106.75 170.29 174.72 203.94 229.71 143.19 163.58 29 E3a_E4a KnownJunction 0 0.00 0.00 0.00 2.03 0.00 0.00 0.00 1.85 1.10 1.40 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 30 E3a_E5a KnownJunction 0 3.26 11.97 16.88 3.20 7.47 12.04 5.87 23.70 29.08 31.89 48.91 13.05 19.15 24.43 18.30 30.59 25.81 41.20 30.31 20.71 61.96 58.85 47.72 31 E3a_E6a KnownJunction 0 3.70 20.33 310.57 119.63 35.91 50.65 23.05 255.11 464.32 221.85 136.35 24.31 33.44 135.97 127.70 159.45 62.37 427.72 504.11 348.28 164.08 274.69 395.74 32 ER4a ExonRegion 0 0.00 1.69 0.02 0.73 4.55 4.55 5.63 0.00 0.12 0.50 2.54 0.00 3.28 3.41 0.00 0.00 2.81 0.06 5.73 0.39 5.55 3.65 9.40 33 E4_Da NovelBoundary 0 36.75 5.53 14.10 9.16 31.58 30.49 24.95 31.26 32.64 24.39 19.27 37.36 19.80 12.42 4.45 19.57 18.61 12.48 25.69 8.44 19.21 23.94 16.22 34 I4 Intron 0 17.38 3.78 6.79 3.78 20.50 14.85 13.62 9.02 11.48 7.67 7.40 14.35 10.45 12.20 6.26 9.43 6.50 6.24 25.44 8.38 10.85 12.09 13.82 35 I4_AR1 ActiveIntronRegion 0 13.01 3.68 8.59 4.40 19.84 17.25 14.82 7.92 9.32 6.18 8.04 17.92 15.17 11.56 5.09 9.13 8.36 7.32 22.46 10.38 13.53 8.65 14.33 36 I4_SR2 SilentIntronRegion 0 26.17 4.26 4.41 3.06 23.39 12.15 12.79 11.62 16.06 10.83 6.99 9.68 3.50 14.29 8.76 10.76 3.98 4.95 32.61 5.77 7.32 18.85 14.14 37 ER5a ExonRegion 1 38.34 14.27 36.60 16.82 34.14 44.40 23.55 73.88 55.66 70.61 54.93 25.42 26.48 73.09 63.59 151.10 40.20 184.30 197.03 37.71 98.03 125.08 187.23 38 E5_Da KnownBoundary 1 93.65 23.48 70.93 31.13 60.70 99.89 55.95 118.46 82.55 110.70 67.70 6.30 20.45 117.78 88.14 269.59 74.33 263.77 384.11 65.32 139.00 184.62 408.38 39 ER5b ExonRegion 0 43.74 16.78 50.28 17.13 79.07 106.85 38.46 79.88 68.59 87.55 86.63 11.33 27.12 79.77 63.59 95.06 54.24 129.34 169.89 45.57 112.24 107.96 132.15 40 E5_Db NovelBoundary 1 10.08 0.00 14.46 2.06 60.78 17.66 29.50 22.80 31.51 7.41 2.16 32.41 0.00 12.83 4.45 20.59 12.90 14.43 16.19 11.63 20.02 18.92 19.63 41 E5b_E6a KnownJunction 0 19.34 15.06 43.11 14.72 87.61 141.91 40.01 57.30 70.28 91.73 91.81 6.00 11.69 38.26 26.33 35.20 34.03 53.72 62.59 37.58 98.16 35.88 49.68 42 E5b_E9a KnownJunction 0 0.00 0.00 0.00 0.00 3.23 0.00 0.00 2.51 1.56 0.00 4.47 7.65 0.00 4.71 4.45 3.42 8.51 0.00 0.00 0.00 16.00 14.57 8.28 43 I5 Intron 0 25.25 7.88 11.44 6.66 20.75 20.51 11.65 22.66 19.76 11.73 9.51 15.23 8.64 11.55 6.74 11.97 10.82 17.26 20.90 6.98 29.90 13.05 16.64 44 I5_AR1 ActiveIntronRegion 0 25.40 7.93 11.50 6.70 20.87 20.63 11.72 22.80 19.87 11.80 9.57 15.32 8.69 11.62 6.78 12.04 10.87 17.36 21.02 7.02 30.07 13.12 16.72 45 ER6a ExonRegion 0 105.25 111.32 325.89 173.95 193.67 409.76 197.16 341.62 576.97 296.50 182.58 59.43 80.92 180.05 183.64 155.09 141.65 352.08 368.47 289.93 267.23 301.24 328.50 46 E6_Ab KnownBoundary 0 319.76 192.66 472.93 288.04 150.42 276.83 97.47 455.18 754.16 355.89 224.37 120.49 100.32 180.76 229.43 179.18 187.10 522.81 477.47 323.36 334.77 407.82 400.52 47 ER6b ExonRegion 0 111.94 132.41 453.71 256.09 137.00 297.28 101.95 439.24 722.25 377.80 197.45 66.46 74.86 211.12 199.39 165.03 153.37 401.70 425.64 343.54 343.53 345.29 312.68 48 E6_Da KnownBoundary 0 60.83 113.47 444.13 189.39 155.60 308.23 100.29 354.18 631.01 366.02 230.22 63.62 73.86 236.10 213.36 203.71 167.37 360.40 405.47 308.66 280.41 343.89 276.58 49 ER6c ExonRegion 0 72.94 113.29 440.30 198.22 121.52 248.32 85.41 409.98 709.44 404.13 239.49 65.58 100.44 220.05 191.48 148.90 185.98 439.67 372.92 311.00 329.86 319.08 297.53 50 E6_Db KnownBoundary 0 100.39 138.99 390.67 207.00 152.21 264.22 121.23 422.82 706.88 338.73 234.32 60.47 160.70 201.60 227.58 119.63 193.83 491.72 398.32 325.02 346.57 321.97 329.67 51 ER6d ExonRegion 0 101.68 156.07 486.97 252.44 167.37 423.61 210.62 450.15 819.54 420.14 228.74 70.13 109.92 212.44 202.47 194.28 158.81 698.97 567.22 310.40 329.75 417.06 458.45 52 E6c_E8c KnownJunction 0 148.10 174.38 628.45 351.57 305.77 742.30 389.43 560.95 970.53 515.08 223.69 60.17 143.50 266.47 293.59 285.14 147.73 804.49 787.79 407.54 294.43 609.58 581.92 53 E7_Aa NovelBoundary 0 7.48 2.57 14.46 5.43 3.90 7.33 6.09 8.26 6.42 6.74 7.42 6.00 0.00 19.25 39.31 42.81 17.67 6.34 21.93 9.20 16.87 12.12 3.76 54 ER7a ExonRegion 0 6.83 2.63 1.18 0.00 0.00 2.37 5.95 0.00 3.46 1.09 3.74 4.44 4.99 9.11 4.19 11.51 16.80 0.00 6.17 0.00 4.30 1.35 7.58 55 E7_Da NovelBoundary 1 56.53 48.28 31.40 26.40 56.03 13.57 81.75 22.71 28.91 38.44 24.22 34.81 36.20 41.38 49.45 49.39 101.64 36.11 36.52 54.27 47.57 32.21 25.27 56 E7a_E8a KnownJunction 0 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 I7_SR2 SilentIntronRegion 0 32.45 7.87 4.61 3.70 36.98 30.17 37.28 7.98 4.38 1.35 10.49 12.99 10.94 11.21 10.88 19.57 19.53 1.80 3.56 0.91 13.72 8.81 6.68 58 E8_Aa NovelBoundary 1 373.62 388.75 185.98 181.99 272.84 202.21 410.27 197.81 175.61 166.41 128.03 441.29 475.78 272.71 321.41 373.58 229.45 284.62 258.74 361.07 176.44 163.37 331.46 59 ER8a ExonRegion 0 3.55 0.00 2.02 0.00 3.54 2.58 1.93 0.70 0.93 0.28 2.56 1.05 0.00 6.58 4.16 10.92 0.80 0.05 0.00 1.44 10.54 5.01 8.10 60 E8_Ab KnownBoundary 0 12.59 0.00 4.88 3.96 11.88 8.06 9.27 4.15 4.34 4.65 7.37 0.00 0.00 18.25 4.45 17.17 0.00 0.00 4.24 3.26 23.29 16.53 18.61 61 ER8b ExonRegion 0 11.83 1.34 14.65 4.92 10.13 8.06 6.96 12.67 12.02 7.92 16.71 4.87 0.66 17.28 11.93 25.02 10.76 8.71 9.50 4.62 24.27 18.35 16.77 62 E8_Ac KnownBoundary 0 10.89 0.00 13.16 4.79 4.33 13.17 10.73 9.41 7.93 7.63 22.80 13.35 0.00 14.36 13.35 12.30 18.14 9.58 4.80 3.07 38.30 17.57 18.18 63 ER8c ExonRegion 0 86.06 113.20 503.04 238.41 221.89 473.54 197.80 497.61 802.71 453.45 236.38 72.97 91.52 221.66 193.77 219.03 129.86 677.30 535.71 340.81 300.94 399.55 484.19 64 E8a_E9a KnownJunction 1 205.22 177.07 705.21 315.64 113.16 392.61 126.17 724.30 1086.39 582.42 243.69 68.57 94.64 341.22 324.25 296.16 104.25 899.33 946.57 354.68 296.53 932.83 722.17 65 E9_Aa NovelBoundary 0 82.61 12.56 37.58 16.51 18.34 19.25 20.76 38.36 29.17 25.12 15.69 12.75 0.00 26.84 41.54 27.60 16.55 56.25 65.79 43.72 17.36 23.70 36.11 66 ER9a ExonRegion 0 178.88 145.50 483.90 194.70 175.65 452.66 188.76 473.18 740.32 411.24 255.04 49.97 79.45 195.52 192.09 194.08 144.94 526.76 495.59 291.32 329.14 405.11 398.04 67 E9_Da KnownBoundary 1 433.71 331.06 669.93 307.32 773.51 1094.48 612.27 651.23 958.82 496.44 300.34 25.51 81.00 189.42 141.67 279.07 169.24 643.44 856.87 420.26 406.56 712.64 645.26 68 ER9b ExonRegion 0 183.34 172.40 473.20 198.71 383.43 576.95 276.36 460.27 688.69 330.04 180.07 38.77 58.73 225.17 212.21 223.53 121.81 501.71 559.28 251.56 282.71 439.15 475.18 69 E9_Db KnownBoundary 1 119.95 151.68 459.95 243.49 228.69 295.57 155.28 440.77 678.90 308.08 139.72 43.66 46.91 189.12 199.64 229.34 69.75 454.62 617.15 292.36 274.23 402.61 441.75 70 ER9c ExonRegion 0 159.60 158.62 504.70 295.04 266.11 419.88 198.22 622.69 865.97 399.73 238.89 68.14 60.03 200.79 212.58 197.56 143.79 454.10 491.31 311.68 297.33 384.64 384.63 71 E9_Dc KnownBoundary 1 102.76 107.94 586.29 423.39 266.64 320.67 238.66 725.04 1062.75 454.67 285.44 23.86 92.04 265.41 319.18 199.09 110.33 687.96 594.18 418.98 334.52 501.75 549.99 72 ER9d ExonRegion 0 77.33 88.86 431.76 256.93 127.31 179.05 93.38 459.67 684.08 308.52 206.41 40.32 32.38 118.64 150.77 149.96 86.28 409.57 405.59 226.67 235.01 310.61 268.57 73 E9_Dd KnownBoundary 0 229.89 90.31 147.04 144.07 209.42 202.38 131.87 226.77 253.41 112.23 36.69 0.00 20.78 90.53 72.56 43.24 62.37 108.52 205.37 133.40 101.38 69.50 136.67 74 ER9e ExonRegion 0 113.89 46.77 72.76 66.59 113.15 117.45 70.67 116.05 123.98 47.90 23.29 0.00 12.51 71.23 122.13 27.32 42.91 63.79 122.71 76.19 70.10 47.23 79.99 75 ER9f ExonRegion 0 82.15 32.28 44.11 44.80 72.08 76.56 47.41 77.02 80.67 28.46 11.48 0.00 7.91 41.11 76.88 19.88 33.42 33.84 76.05 46.41 40.77 28.65 53.04 76 ER9g ExonRegion 0 19.05 5.29 12.25 10.63 3.21 5.13 10.06 17.28 10.37 6.65 0.77 0.00 0.00 1.62 5.80 8.32 6.60 0.00 7.01 4.68 4.41 5.42 5.87