Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-3N2.7 Gene 0 0.79 16.79 0.84 10.18 17.25 27.77 44.34 13.02 1.03 10.95 0.00 0.51 0.24 0.07 0.17 0.00 0.00 16.43 0.27 17.70 0.00 0.22 0.12 2 445978 Transcript 0 0.17 7.11 0.54 3.23 11.41 23.21 26.37 6.30 0.00 6.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.17 0.00 17.24 0.00 0.00 0.00 3 456806 Transcript 0 0.16 3.91 0.14 2.64 3.76 5.80 11.10 4.12 0.27 2.95 0.00 0.13 0.06 0.02 0.04 0.00 0.00 6.98 0.07 5.53 0.00 0.05 0.03 4 ER1a ExonRegion 0 1.19 19.06 0.51 7.01 29.99 55.24 51.43 6.34 0.00 7.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.47 0.00 15.03 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 15.33 0.00 5.03 4.07 2.73 17.49 8.17 0.00 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.28 0.00 26.08 0.00 0.00 0.00 6 ER2a ExonRegion 0 0.00 8.13 0.00 4.09 0.00 1.83 10.59 9.94 0.00 5.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.09 0.00 22.34 0.00 0.00 0.00 7 ER2b ExonRegion 0 0.00 2.41 2.27 6.73 1.33 4.26 6.50 12.21 0.00 11.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.88 0.00 25.88 0.00 0.00 0.00 8 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.00 1.02 0.00 2.04 1.34 3.67 9.27 6.91 0.00 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.25 0.00 10.64 0.00 0.00 0.00 12 ER3b ExonRegion 0 0.00 2.06 1.83 2.73 14.72 60.26 30.99 10.87 0.00 7.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.56 0.00 10.16 0.00 0.00 0.00 13 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E3_Db NovelBoundary 0 0.00 20.85 0.00 3.73 10.95 2.44 7.73 4.39 0.00 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.39 0.00 0.00 0.00 0.00 0.00 15 E3b_E4a KnownJunction 0 0.00 3.16 0.00 1.23 18.85 35.55 35.73 4.23 0.00 11.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.49 0.00 12.53 0.00 0.00 0.00 16 ER3c ExonRegion 0 0.00 2.03 2.45 2.73 13.38 36.68 34.42 6.91 0.00 9.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.63 0.00 19.15 0.00 0.00 0.00 17 Ix Intron 0 0.65 14.84 1.80 7.77 10.20 7.26 22.50 6.63 0.46 3.67 0.06 0.71 0.45 0.10 0.28 0.13 0.15 2.34 0.19 7.76 0.00 0.61 0.04 18 Ix_SR1 SilentIntronRegion 0 0.65 14.85 1.80 7.78 10.20 7.26 22.51 6.64 0.46 3.67 0.06 0.71 0.45 0.10 0.28 0.13 0.15 2.34 0.19 7.77 0.00 0.61 0.04 19 E4_Ab NovelBoundary 0 0.00 10.00 0.00 1.53 10.10 14.93 53.44 8.01 0.00 6.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.52 0.00 31.45 0.00 0.00 0.00 20 ER4a ExonRegion 0 0.00 2.03 0.82 2.54 13.56 30.44 34.95 8.53 0.00 8.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.26 0.00 25.53 0.00 0.00 0.00 21 ER4b ExonRegion 0 1.74 15.24 1.50 10.60 14.35 25.14 56.25 15.68 0.00 12.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.01 0.00 28.74 0.00 0.12 0.00 22 E4_Da KnownBoundary 0 25.12 66.44 14.01 47.98 96.10 86.83 118.93 66.13 23.21 37.71 31.22 12.60 108.11 36.49 9.52 45.03 38.80 51.11 8.19 114.28 2.53 13.59 18.87 23 ER4c ExonRegion 0 0.79 18.51 0.68 11.14 17.48 25.31 46.22 13.71 1.33 11.32 0.00 0.65 0.31 0.09 0.22 0.00 0.00 12.70 0.34 17.04 0.00 0.27 0.16