Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	ZNF138	Gene	0	54.98	81.11	65.01	69.83	83.66	88.60	101.75	56.33	48.74	80.03	32.92	61.71	50.33	25.98	29.57	24.30	39.29	31.45	25.18	75.79	5.45	13.41	8.32
2	307355	Transcript	0	3.17	2.84	0.45	1.04	14.79	12.79	10.49	0.00	0.42	1.81	2.85	0.00	0.00	3.50	8.47	0.00	4.00	1.36	0.42	2.52	4.41	0.93	2.70
3	494380	Transcript	0	15.17	18.90	15.04	11.95	9.05	13.06	24.22	14.04	10.79	9.45	7.93	5.26	5.26	4.61	2.46	6.85	25.43	10.70	5.51	26.91	4.47	4.99	0.73
4	440155	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	440598	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	359735	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	437743	Transcript	0	6.45	1.17	2.09	0.78	3.42	0.00	1.13	1.61	0.00	0.94	1.15	0.00	3.11	0.19	0.55	0.57	1.26	2.61	0.00	4.89	0.02	1.00	1.12
8	430838	Transcript	0	3.76	6.24	4.95	3.86	8.70	6.64	9.15	2.45	4.03	7.73	4.58	9.02	0.00	2.52	2.42	0.00	4.25	3.60	1.59	11.07	4.48	1.83	0.00
9	ER1a	ExonRegion	0	3.17	2.84	0.45	1.04	14.79	12.79	10.49	0.00	0.42	1.81	2.85	0.00	0.00	3.50	8.47	0.00	4.00	1.36	0.42	2.52	4.41	0.93	2.70
10	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	2.03	8.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.07	0.00	0.00	3.09	0.00	0.00
11	E1_Ac	KnownBoundary	0	20.52	14.27	3.81	5.46	42.61	48.38	44.34	0.00	1.24	4.54	14.16	0.00	0.00	13.95	10.01	0.00	12.53	8.66	0.00	10.80	12.29	5.08	7.34
12	ER1b	ExonRegion	1	19.05	10.17	2.45	5.45	69.57	73.96	67.08	0.00	2.47	10.32	11.60	0.00	0.00	17.87	26.11	0.99	19.81	7.39	3.19	12.77	15.43	4.17	11.75
13	ER1c	ExonRegion	1	54.24	58.02	11.17	14.46	91.28	145.52	104.40	3.26	12.45	25.92	30.86	0.00	0.00	25.23	25.83	26.13	49.67	36.66	25.12	36.75	16.92	7.26	15.68
14	E1_Ad	KnownBoundary	0	39.34	59.92	19.90	24.47	61.12	113.00	109.97	10.76	21.90	36.02	26.80	0.00	0.00	14.13	10.51	54.00	83.78	66.37	26.26	48.96	8.28	2.82	17.33
15	ER1d	ExonRegion	0	20.28	24.91	9.15	13.53	28.24	23.48	46.45	8.00	15.51	25.94	24.77	2.30	4.92	7.96	10.35	21.03	39.98	33.92	28.75	29.92	15.13	0.64	5.00
16	E1_Da	NovelBoundary	0	0.00	0.00	9.64	0.00	0.00	0.00	4.15	4.64	1.79	4.03	13.32	0.00	0.00	0.00	0.00	0.00	4.21	2.45	0.00	2.75	3.15	0.00	4.27
17	E1a_E2a	KnownJunction	0	3.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E1a_E3a	KnownJunction	0	20.00	5.92	11.59	5.63	0.00	8.18	9.32	6.94	11.08	21.19	38.54	0.00	0.00	2.47	9.15	0.00	17.86	26.45	3.95	14.83	14.09	0.00	0.00
19	E1a_E6a	KnownJunction	0	3.63	6.71	0.00	3.63	0.00	2.90	6.05	0.00	7.44	14.32	9.16	0.00	0.00	3.00	0.00	0.00	8.51	5.97	0.00	17.71	8.96	2.45	0.00
20	I1_AR2	ActiveIntronRegion	0	6.35	4.33	8.92	4.43	5.81	2.13	17.33	8.46	4.66	4.17	7.87	8.04	8.78	6.93	4.15	7.86	11.55	8.30	6.56	12.98	0.93	1.76	3.44
21	ER2a	ExonRegion	0	15.93	3.50	4.61	2.33	2.01	0.00	1.15	2.27	0.00	2.81	0.76	0.00	9.33	0.58	1.66	1.70	3.78	5.25	0.00	11.40	0.05	0.00	3.37
22	E2a_E3a	KnownJunction	0	0.00	0.00	1.66	0.00	8.23	0.00	2.25	2.55	0.00	0.00	2.68	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	3.26	0.00	3.00	0.00
23	ER3a	ExonRegion	0	11.02	12.65	29.20	19.36	17.34	21.14	20.46	14.44	13.76	43.56	37.90	18.24	11.60	20.32	23.14	28.50	47.77	30.45	15.68	49.92	13.19	8.61	5.34
24	E3a_E4a	KnownJunction	0	3.48	9.08	11.27	13.58	14.26	27.31	9.58	11.38	6.19	26.51	9.58	5.85	28.24	7.42	21.39	3.42	12.90	20.06	19.86	12.27	0.00	0.00	0.00
25	E3a_E4b	KnownJunction	0	3.78	3.35	11.92	12.82	30.56	21.12	14.18	14.05	6.11	16.95	9.37	6.00	7.30	9.42	16.44	7.95	22.35	15.88	0.00	13.87	11.12	3.00	7.34
26	E3a_E6a	KnownJunction	0	2.74	12.83	1.12	7.29	24.11	2.33	2.25	12.77	1.62	11.71	14.11	5.85	0.00	7.06	10.63	15.81	12.90	15.63	8.94	24.74	5.68	0.00	0.00
27	I3	Intron	0	9.42	18.09	8.72	7.49	6.97	0.60	15.52	7.55	5.59	5.75	1.47	3.79	2.87	1.02	1.20	4.19	2.51	1.60	3.46	13.39	1.20	0.68	2.23
28	I3_AR1	ActiveIntronRegion	0	12.38	19.82	8.30	8.25	7.39	0.60	14.22	9.20	6.28	6.15	1.88	4.51	3.14	1.09	1.33	4.83	3.22	1.64	3.10	15.90	1.79	0.68	1.91
29	E4_Aa	NovelBoundary	0	0.00	5.85	1.83	3.96	11.38	2.56	17.14	20.29	1.77	1.29	2.68	12.45	0.00	2.47	0.00	0.00	9.07	2.36	0.00	2.68	0.00	0.00	0.00
30	E4_Ab	NovelBoundary	0	43.64	82.29	75.84	81.81	252.12	265.93	152.63	125.81	129.25	86.58	25.06	12.45	0.00	11.77	21.14	51.78	48.06	110.27	47.53	167.85	27.00	33.37	38.16
31	ER4a	ExonRegion	0	1.27	9.76	14.21	14.45	26.22	28.97	14.83	16.25	7.41	20.19	19.33	6.93	19.70	8.45	17.99	7.13	26.41	18.48	17.84	10.64	4.41	0.83	1.17
32	ER4b	ExonRegion	0	11.27	20.36	24.84	26.44	49.90	50.61	36.38	21.19	11.92	30.83	45.84	13.38	24.55	15.80	29.84	34.89	32.07	21.67	12.33	28.68	9.47	2.87	4.73
33	E4_Da	NovelBoundary	0	21.93	19.27	10.85	9.82	12.22	4.71	29.68	10.72	4.63	10.80	7.79	0.00	6.82	0.00	5.19	4.02	4.30	1.82	16.94	43.78	0.00	0.00	0.00
34	E4a_E5a	KnownJunction	0	6.45	5.85	4.82	3.10	3.82	13.29	16.38	5.09	3.33	4.73	5.11	0.00	6.33	0.00	0.00	0.00	11.87	2.57	0.00	12.08	0.00	0.00	0.00
35	E4a_E6a	KnownJunction	0	0.00	2.70	9.52	12.69	11.54	27.03	16.65	4.97	8.28	34.81	34.54	7.50	26.78	12.30	25.96	15.72	22.63	9.70	8.47	15.02	8.09	3.00	0.00
36	I4_AR2	ActiveIntronRegion	1	27.51	13.78	7.35	9.54	11.59	21.39	45.16	18.05	5.35	13.25	15.03	4.33	11.46	4.33	4.84	14.20	15.40	20.33	10.97	21.99	0.00	5.32	2.94
37	I4_AR3	ActiveIntronRegion	0	23.74	17.14	8.67	10.51	13.76	21.48	38.49	18.77	6.62	15.65	11.60	4.33	13.40	2.44	2.90	18.26	9.90	21.78	15.02	18.54	1.26	6.25	2.94
38	I4_AR4	ActiveIntronRegion	0	16.63	6.84	3.48	2.52	5.93	6.20	10.01	6.97	1.76	6.55	2.10	0.15	3.49	3.43	4.90	8.35	6.36	6.94	3.36	15.54	1.34	1.45	2.44
39	E5_Aa	NovelBoundary	0	26.89	15.79	26.05	6.26	14.60	24.70	18.50	17.74	10.47	17.70	2.05	0.00	26.95	4.71	4.45	4.36	8.13	25.58	12.89	33.81	0.00	0.00	3.84
40	ER5a	ExonRegion	0	27.79	23.42	16.04	16.68	19.26	21.64	48.77	19.54	15.40	15.16	16.63	15.77	9.45	6.78	7.37	13.80	25.15	15.65	12.95	42.30	8.04	6.02	2.19
41	E5_Da	NovelBoundary	0	29.86	16.44	6.27	6.43	3.74	2.38	34.80	11.21	15.57	14.56	4.63	0.00	19.32	4.94	4.45	26.75	12.06	13.43	13.65	31.89	0.00	5.88	0.00
42	E5a_E6a	KnownJunction	1	11.26	27.43	24.27	16.08	4.07	4.26	7.51	17.50	13.66	8.46	2.05	0.00	0.00	7.06	0.00	6.75	39.27	13.89	3.58	26.33	5.37	8.94	0.00
43	I5	Intron	0	25.69	14.97	6.23	14.68	15.32	5.25	18.05	11.94	7.53	10.26	2.11	8.37	11.62	4.23	5.84	7.70	7.20	5.77	6.52	17.99	1.20	0.85	2.00
44	I5_AR1	ActiveIntronRegion	0	39.66	14.18	4.60	11.42	15.15	3.24	19.90	9.50	6.79	10.69	3.20	6.55	13.58	4.44	3.20	5.11	8.06	5.71	6.58	17.39	1.17	0.96	2.61
45	I5_SR1	SilentIntronRegion	0	16.35	15.96	7.52	17.40	15.88	6.85	17.21	14.02	8.27	10.24	1.38	9.91	10.54	4.19	7.84	9.78	6.79	5.96	6.65	18.89	1.26	0.80	1.62
46	E6_Aa	NovelBoundary	0	20.52	12.63	3.08	18.61	25.72	5.56	22.30	16.35	21.01	24.10	6.84	12.15	6.82	0.00	10.75	7.86	16.92	1.78	13.93	24.16	0.00	5.63	4.27
47	ER6a	ExonRegion	0	52.55	67.41	52.16	66.13	73.15	97.09	94.08	55.01	56.13	101.40	45.10	77.02	73.26	36.36	42.54	29.02	41.92	35.35	28.15	81.50	7.83	16.20	7.43
48	E6_Da	KnownBoundary	1	19.34	85.45	53.93	90.53	58.40	122.20	108.29	115.01	157.17	139.31	23.01	143.75	67.69	19.37	21.63	10.34	34.60	30.51	16.85	78.30	2.59	5.08	4.27
49	ER6b	ExonRegion	0	45.15	60.48	67.64	79.98	95.71	114.18	120.50	79.72	62.09	103.49	43.17	93.82	74.35	33.96	26.62	38.82	50.76	48.47	29.41	116.02	4.82	20.78	13.70
50	E6_Db	KnownBoundary	0	64.90	53.02	87.19	101.82	100.17	110.67	152.23	78.20	55.41	98.26	33.01	65.12	66.07	20.13	14.34	40.25	65.08	39.71	22.97	139.53	2.97	22.72	7.51
51	ER6c	ExonRegion	0	35.50	41.84	69.60	92.44	104.82	86.60	110.22	59.67	65.74	88.97	40.35	76.20	87.12	28.18	13.85	29.28	54.46	30.35	33.76	105.58	2.48	15.31	13.44
52	E6_Dc	KnownBoundary	0	32.82	27.50	45.80	80.81	163.75	77.91	140.13	55.45	94.44	94.61	50.75	90.18	93.99	31.31	22.13	23.75	57.97	28.52	50.82	114.35	0.00	10.90	21.60
53	ER6d	ExonRegion	0	86.04	121.68	90.16	97.70	119.00	123.67	143.96	72.20	64.49	101.51	36.84	74.54	59.54	30.76	34.49	24.85	47.66	36.35	31.47	90.98	4.02	15.59	8.89
54	E6_Dd	KnownBoundary	1	97.42	191.35	128.38	101.42	125.21	60.82	116.81	67.85	56.45	106.96	7.79	86.88	41.88	12.71	67.74	16.49	27.49	7.17	26.82	80.28	0.00	11.21	11.87
55	ER6e	ExonRegion	1	36.65	108.52	86.26	72.85	67.55	38.97	72.21	62.29	43.28	67.50	12.07	62.49	40.32	17.22	33.03	10.50	11.46	10.85	16.99	51.40	1.00	11.59	6.62
56	ER6f	ExonRegion	1	3.88	5.76	9.91	4.09	17.39	10.39	12.25	4.90	0.62	1.15	0.00	18.04	0.00	2.03	4.84	0.00	0.00	1.23	3.19	4.43	0.00	1.22	0.00
57	IG12	Intergenic	0	12.55	15.96	13.78	22.97	57.76	32.32	57.70	14.81	18.55	21.03	2.99	11.93	8.16	8.47	2.77	2.58	2.65	6.89	8.47	33.57	0.81	3.09	2.54
58	IG12_AR3	ActiveIntergenicRegion	0	0.00	12.75	9.56	7.75	30.54	25.99	37.91	13.87	5.39	7.16	2.03	4.54	0.00	16.36	6.44	6.81	5.15	6.13	14.61	30.77	0.00	0.86	2.72
59	IG12_SR1	SilentIntergenicRegion	0	13.36	16.31	14.16	24.04	59.87	33.03	59.42	15.04	19.46	22.01	3.07	12.46	8.68	8.15	2.61	2.38	2.55	7.01	8.24	34.11	0.87	3.24	2.56