Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF92 Gene 0 42.54 96.75 59.70 49.75 163.83 111.53 148.00 80.92 36.29 100.46 79.36 138.82 111.42 55.66 46.96 44.50 54.37 23.91 10.72 59.12 4.52 31.74 9.45 2 328747 Transcript 0 1.89 26.59 9.03 17.59 25.38 31.38 16.22 16.66 9.83 19.97 32.06 21.61 13.55 17.95 2.55 32.94 32.57 38.89 4.66 26.66 0.14 2.85 5.98 3 488849 Transcript 0 4.99 10.34 3.89 2.91 27.45 5.44 25.35 4.05 2.37 8.03 4.73 7.40 16.62 5.23 3.16 3.11 0.89 2.82 0.34 11.83 0.00 1.98 0.72 4 431504 Transcript 0 0.00 0.00 0.00 1.70 7.39 5.34 4.20 2.14 1.68 1.45 5.21 0.00 0.00 2.65 0.00 0.00 8.04 2.07 0.00 0.00 2.53 0.00 0.00 5 357512 Transcript 0 0.00 0.00 0.00 0.00 7.72 0.00 0.00 2.55 1.19 2.98 0.00 0.00 0.00 9.95 4.45 8.54 0.00 8.58 0.00 2.68 0.00 3.12 0.00 6 450302 Transcript 0 0.00 0.00 0.00 3.00 0.00 0.00 0.00 0.00 1.50 11.90 2.68 0.00 0.00 5.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.00 3.00 0.00 1.09 0.00 1.88 1.79 0.00 1.11 0.80 3.04 0.00 0.00 0.53 0.65 0.00 0.25 3.33 0.00 2.13 0.28 0.00 0.00 8 E1_Ab KnownBoundary 0 0.00 2.83 1.51 0.00 0.00 2.44 1.68 2.01 0.00 1.53 2.68 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 9 E1_Ac KnownBoundary 0 0.00 3.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1_Ad KnownBoundary 0 29.34 60.65 7.30 3.26 12.48 54.12 49.24 5.83 0.00 14.56 12.58 0.00 0.00 32.08 25.47 35.63 22.72 42.49 23.25 18.79 12.17 17.27 25.01 11 ER1b ExonRegion 0 0.00 6.10 0.00 1.36 0.00 11.00 9.27 0.00 1.24 2.29 9.66 0.00 0.00 3.25 2.90 0.00 3.30 9.24 0.00 6.38 4.41 0.00 0.00 12 ER1c ExonRegion 0 2.25 12.58 0.00 3.66 3.01 20.74 17.96 1.40 4.25 3.08 13.41 0.00 0.00 11.57 11.97 14.12 10.93 15.13 0.20 9.44 8.95 2.08 2.39 13 E1_Ae KnownBoundary 0 31.26 90.25 0.00 11.32 56.45 137.08 105.28 12.65 9.84 16.04 34.69 5.25 0.00 38.55 13.35 54.86 68.44 33.04 8.94 49.60 14.89 14.70 15.79 14 ER1d ExonRegion 0 14.90 49.04 0.71 9.12 26.86 86.47 63.40 6.32 6.32 11.34 31.37 3.66 0.00 36.42 20.42 37.95 37.58 22.53 4.90 30.69 15.34 9.14 8.81 15 ER1e ExonRegion 0 37.39 85.22 7.50 12.53 79.42 127.12 115.14 24.78 10.52 31.25 54.06 16.12 7.80 44.15 16.72 60.92 77.17 48.29 9.80 43.80 16.22 9.09 9.08 16 E1a_E2a KnownJunction 1 3.11 20.92 4.67 6.66 12.82 10.56 15.46 14.99 6.66 17.35 33.90 34.81 6.33 7.24 9.15 7.43 51.99 17.74 8.09 6.01 16.62 5.45 0.00 17 E1a_E3a KnownJunction 0 0.00 0.00 0.00 3.00 0.00 0.00 0.00 0.00 1.50 11.90 2.68 0.00 0.00 5.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E1a_E4a KnownJunction 0 0.00 0.00 0.00 1.70 7.39 5.34 4.20 2.14 1.68 1.45 5.21 0.00 0.00 2.65 0.00 0.00 8.04 2.07 0.00 0.00 2.53 0.00 0.00 19 E2_Aa NovelBoundary 0 22.82 0.00 0.00 0.00 3.74 0.00 4.02 3.94 5.03 0.00 0.00 0.00 6.82 0.00 0.00 0.00 7.76 0.00 0.00 3.00 0.00 0.00 0.00 20 ER2a ExonRegion 1 11.78 33.16 12.57 21.26 44.62 20.92 40.13 33.55 14.32 43.37 83.53 38.52 27.07 70.92 24.81 75.59 94.45 61.67 9.03 62.02 10.81 18.28 11.38 21 E2_Da KnownBoundary 0 7.41 5.99 0.00 4.13 21.14 0.00 21.11 0.00 1.27 7.44 0.00 0.00 0.00 4.94 0.00 0.00 0.00 7.67 0.00 9.01 0.00 2.45 0.00 22 E2a_E3a KnownJunction 0 3.78 50.19 18.07 34.09 50.76 60.87 30.65 33.31 18.55 39.14 61.07 43.21 27.11 35.38 4.45 65.88 64.89 74.45 9.32 51.20 0.00 5.69 11.95 23 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 7.72 0.00 0.00 2.55 1.19 2.98 0.00 0.00 0.00 9.95 4.45 8.54 0.00 8.58 0.00 2.68 0.00 3.12 0.00 24 ER2b ExonRegion 0 4.99 10.34 3.89 2.91 27.45 5.44 25.35 4.05 2.37 8.03 4.73 7.40 16.62 5.23 3.16 3.11 0.89 2.82 0.34 11.83 0.00 1.98 0.72 25 ER3a ExonRegion 1 11.42 68.97 19.49 27.78 148.67 163.17 143.68 49.17 26.12 50.95 96.97 68.10 55.60 63.54 18.28 46.84 74.37 53.89 9.03 52.84 11.43 23.44 14.22 26 E3_Da NovelBoundary 0 11.34 6.05 1.60 5.86 92.70 17.15 105.59 4.31 1.65 0.00 2.68 0.00 6.82 2.83 0.00 4.36 0.00 6.34 0.00 9.72 0.00 0.00 3.41 27 E3a_E4a KnownJunction 0 25.49 152.14 11.92 29.37 119.69 116.81 113.19 54.59 36.92 66.67 80.60 138.65 82.46 73.99 28.18 66.73 47.78 29.51 8.00 61.74 6.12 37.78 11.44 28 ER4a ExonRegion 0 51.06 114.24 74.21 60.57 195.34 128.72 173.72 98.51 43.97 122.17 90.85 171.62 137.04 62.71 56.86 48.29 58.61 23.06 12.45 67.24 3.97 38.18 10.48 29 E4_Da KnownBoundary 0 2.82 9.41 4.85 3.13 3.99 2.90 0.00 2.22 1.62 4.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E4_Db KnownBoundary 0 3.78 0.00 5.00 0.00 0.00 0.00 3.97 7.89 2.78 4.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 31 ER4b ExonRegion 0 4.23 6.78 11.44 7.27 8.03 3.67 5.74 3.46 3.71 4.59 1.93 12.99 0.00 0.00 6.77 2.97 0.00 0.00 0.00 2.13 0.00 0.00 0.00 32 ER4c ExonRegion 0 1.81 2.08 2.39 3.29 2.68 0.76 2.58 1.01 0.84 1.82 0.00 2.43 0.00 0.00 0.21 0.00 0.00 0.00 0.00 1.76 0.00 0.00 0.00