Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NSUN5 Gene 0 43.57 27.16 121.44 73.09 31.86 53.45 39.22 63.76 34.37 91.51 83.33 18.19 14.33 117.69 108.03 109.27 84.28 87.32 30.03 53.37 24.91 16.46 19.04 2 438747 Transcript 0 9.32 4.65 8.15 2.57 14.92 13.68 18.69 3.62 2.28 7.54 18.07 0.00 0.00 10.71 27.62 23.72 14.92 19.69 7.96 6.10 3.05 2.68 6.95 3 310326 Transcript 0 0.00 0.00 9.76 2.06 3.82 16.64 0.00 7.64 1.79 10.64 16.95 0.00 6.33 16.72 13.35 16.66 8.13 1.91 0.00 5.62 0.00 5.45 3.76 4 471461 Transcript 0 57.09 10.36 47.25 33.16 47.91 43.00 18.17 33.37 14.77 26.42 36.81 14.41 5.37 56.20 35.12 44.80 31.50 28.90 12.86 16.30 14.26 8.35 24.05 5 446455 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 252594 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 428206 Transcript 0 6.72 11.73 22.18 20.14 9.63 13.38 12.82 15.18 9.01 14.84 2.03 0.83 0.87 2.53 2.70 3.68 5.04 9.36 3.90 10.78 0.40 1.26 1.35 8 455763 Transcript 0 0.00 0.00 0.00 2.06 0.00 0.00 3.67 0.00 0.00 2.42 0.00 0.00 0.00 2.71 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 9 478977 Transcript 0 25.00 5.73 29.41 30.84 8.90 16.51 9.58 15.17 8.51 19.08 14.34 5.60 6.75 20.30 18.35 41.38 25.60 31.36 8.42 10.93 4.51 2.10 5.06 10 ER1a ExonRegion 1 9.32 4.65 8.15 2.57 14.92 13.68 18.69 3.62 2.28 7.54 18.07 0.00 0.00 10.71 27.62 23.72 14.92 19.69 7.96 6.10 3.05 2.68 6.95 11 E1_Ab KnownBoundary 0 18.23 9.93 1.83 0.00 46.18 19.08 42.62 2.51 0.00 0.00 23.48 0.00 0.00 9.12 14.83 28.80 28.14 19.77 9.32 12.78 6.30 2.69 8.45 12 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.28 0.00 0.00 0.00 0.00 0.00 13 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1_Ae KnownBoundary 0 53.19 33.02 44.76 22.71 22.16 61.33 47.74 9.73 12.47 27.10 50.28 0.00 0.00 19.48 25.22 55.80 44.79 69.02 22.78 40.84 15.88 11.08 27.23 15 ER1b ExonRegion 1 51.27 32.99 59.09 24.99 41.62 69.28 67.67 17.09 13.72 34.02 79.25 0.00 0.00 47.10 90.58 90.48 64.55 83.56 41.41 43.74 23.51 12.50 34.26 16 ER1c ExonRegion 1 74.08 50.84 77.20 29.98 53.51 93.52 88.71 24.20 16.06 52.76 98.58 0.00 0.00 55.22 118.95 130.77 105.63 103.47 54.15 65.96 35.26 14.58 46.99 17 ER1d ExonRegion 1 78.31 50.84 79.04 34.07 53.51 92.61 92.02 24.20 17.29 57.35 110.18 0.00 0.00 56.03 123.30 130.77 107.28 106.25 60.52 65.96 37.46 14.58 46.99 18 ER1e ExonRegion 0 101.17 68.83 146.99 73.61 59.90 127.03 102.66 41.60 29.95 101.53 167.54 15.40 16.33 106.79 159.92 227.06 175.48 157.55 104.28 80.87 59.77 22.27 34.74 19 E1a_E2a KnownJunction 0 10.45 5.79 38.02 17.95 6.28 0.00 4.37 11.30 9.55 21.30 34.69 6.00 0.00 10.77 8.90 10.77 29.36 17.99 9.41 11.12 2.78 0.00 0.00 20 ER2a ExonRegion 1 7.66 10.04 172.00 69.30 6.20 7.41 13.34 47.83 35.69 125.63 151.30 7.74 13.57 160.29 170.87 173.64 206.88 118.15 66.22 81.56 61.45 21.72 32.40 21 E2_Da KnownBoundary 1 3.11 0.00 4.85 26.90 0.00 2.90 2.08 1.68 6.89 8.11 12.53 0.00 6.82 50.62 39.31 66.48 8.13 13.10 14.31 12.27 5.56 0.00 19.97 22 E2a_E2b KnownJunction 1 6.22 35.85 298.22 127.92 23.09 20.44 18.50 95.33 41.90 150.27 77.60 24.91 6.82 230.09 294.58 577.88 66.85 366.95 196.62 129.88 30.21 50.82 114.64 23 E2a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E2a_E4a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 3.67 0.00 0.00 2.42 0.00 0.00 0.00 2.71 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 25 ER2b ExonRegion 0 32.01 5.93 19.20 20.44 26.72 22.24 16.03 21.40 8.83 23.22 20.50 10.35 10.74 48.94 27.22 39.87 30.84 23.15 12.26 17.26 7.14 5.55 13.35 26 E2_Ab KnownBoundary 1 59.64 6.71 15.94 14.15 42.95 60.82 20.58 24.89 7.29 14.48 33.69 12.15 8.28 67.10 18.91 49.99 39.08 31.59 21.46 16.11 6.30 7.78 6.40 27 ER2c ExonRegion 0 69.07 66.34 221.09 132.61 85.84 185.89 118.97 108.16 52.29 145.50 152.78 34.29 23.16 235.40 237.88 301.54 157.00 235.57 77.34 96.17 40.94 33.28 45.03 28 E2_Ac KnownBoundary 0 142.03 118.66 270.54 166.11 137.78 375.47 278.45 112.38 60.39 196.60 178.57 35.71 38.63 290.78 228.32 237.29 177.84 205.98 69.27 181.65 57.58 17.27 36.96 29 ER2d ExonRegion 0 72.77 94.80 311.88 190.05 59.04 191.42 126.61 134.30 58.03 204.11 207.30 41.27 30.56 228.03 178.48 206.81 181.99 236.94 34.93 113.26 47.53 23.58 45.52 30 E2_Db NovelBoundary 0 17.04 3.22 0.00 5.66 3.65 7.55 6.23 6.45 3.59 9.03 13.85 0.00 0.00 14.36 20.40 4.19 3.74 10.28 4.80 3.07 10.13 3.06 12.63 31 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E3_Aa NovelBoundary 0 92.61 14.60 20.52 11.62 25.21 53.09 17.05 16.88 5.15 6.10 17.64 12.60 0.00 42.73 55.01 33.41 12.72 20.81 9.32 21.80 5.99 5.76 16.56 33 ER3a ExonRegion 0 154.89 72.37 337.26 211.42 72.71 103.99 75.13 172.62 95.31 260.97 283.25 59.34 28.57 316.26 272.90 295.99 229.37 256.70 75.54 131.66 59.08 44.81 34.97 34 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E4_Aa NovelBoundary 0 3.70 18.55 23.77 28.60 11.63 4.43 9.67 11.83 3.59 11.39 2.63 0.00 0.00 6.95 11.50 16.83 8.32 15.42 4.14 3.26 8.96 2.51 10.93 36 ER4a ExonRegion 0 84.45 60.41 278.27 167.32 36.63 106.60 88.62 128.04 78.93 200.95 162.53 37.59 22.03 188.71 139.68 194.28 150.27 205.42 37.72 87.39 48.83 30.26 31.75 37 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER5a ExonRegion 0 93.33 61.88 243.04 158.67 59.54 111.75 64.20 129.29 64.60 191.56 141.20 45.65 26.73 278.83 229.00 246.25 148.28 182.26 52.89 104.81 57.18 47.09 30.40 39 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E5a_E6c KnownJunction 0 82.16 14.80 75.31 45.88 69.10 63.77 20.31 45.35 20.72 29.63 53.12 18.46 0.00 63.45 43.02 49.73 32.16 34.66 13.46 15.34 21.37 11.14 34.74 41 E6_Aa NovelBoundary 0 13.93 0.00 17.86 11.02 4.07 5.51 11.92 10.97 9.92 7.76 9.27 12.45 0.00 7.48 5.32 12.22 8.70 48.42 17.04 0.00 0.00 8.82 0.00 42 ER6a ExonRegion 0 25.00 5.73 29.41 30.84 8.90 16.51 9.58 15.17 8.51 19.08 14.34 5.60 6.75 20.30 18.35 41.38 25.60 31.36 8.42 10.93 4.51 2.10 5.06 43 E6_Ab KnownBoundary 0 7.19 3.09 14.28 11.19 0.00 7.38 26.01 8.13 2.72 9.67 6.95 0.00 0.00 4.65 0.00 4.36 0.00 9.24 0.00 9.27 2.29 0.00 4.01 44 E6_Ac KnownBoundary 0 6.74 3.29 8.72 7.36 16.30 10.62 0.00 7.64 1.53 1.67 4.16 0.00 0.00 6.89 5.93 0.00 8.04 4.19 4.61 2.62 6.12 0.00 6.83 45 ER6b ExonRegion 0 88.36 37.62 214.75 118.91 64.22 142.58 114.52 121.86 68.55 176.62 139.17 30.31 18.76 129.52 132.01 145.63 126.26 126.11 25.48 86.70 52.89 42.71 24.23 46 ER6c ExonRegion 0 102.27 46.31 278.37 135.00 77.44 125.47 95.25 123.15 82.92 207.84 151.84 55.10 22.17 257.76 201.51 171.13 156.68 146.27 34.68 108.29 62.71 46.29 30.00 47 E6_Da KnownBoundary 0 251.38 116.10 561.16 319.34 120.37 250.14 189.99 264.07 145.20 393.82 287.97 37.96 26.95 343.75 362.32 290.18 225.53 314.09 62.12 156.34 123.62 71.89 47.97 48 ER6d ExonRegion 0 88.03 65.88 250.37 146.03 41.16 98.94 75.96 149.93 72.04 196.01 177.85 26.53 23.12 302.45 252.41 176.22 165.16 145.20 34.74 124.37 46.87 28.13 22.37 49 E6_Db NovelBoundary 0 19.93 3.29 26.43 10.75 7.81 5.00 4.11 1.68 5.21 10.61 2.47 6.00 0.00 2.06 0.00 7.01 9.44 6.72 3.86 0.00 2.90 2.88 4.10 50 E6b_E7a KnownJunction 0 22.00 31.97 166.97 94.96 12.65 36.97 29.68 73.73 42.45 104.76 48.38 12.75 6.66 31.08 21.01 45.03 89.01 77.85 13.08 51.71 18.97 15.25 3.50 51 I6_SR2 SilentIntronRegion 0 11.77 0.00 0.00 0.00 6.40 10.23 2.11 0.00 0.00 0.00 3.08 0.00 0.00 6.39 3.26 4.74 0.00 0.00 0.00 0.00 1.76 0.00 0.00 52 ER7a ExonRegion 0 54.55 26.53 231.88 114.46 28.75 63.23 46.96 116.70 68.99 176.10 163.13 43.09 24.34 240.66 231.31 168.04 140.69 171.88 47.27 101.67 45.32 40.29 36.26 53 E7_Da KnownBoundary 0 140.69 29.86 361.58 217.62 106.28 90.74 54.76 198.88 122.02 236.28 148.72 24.91 13.64 267.41 309.54 170.38 150.44 229.86 44.80 110.70 41.64 27.56 87.33 54 ER7b ExonRegion 0 52.13 32.91 200.11 120.44 52.83 74.47 61.47 135.38 64.57 149.80 150.60 30.02 28.36 304.48 297.12 252.15 166.18 159.77 57.43 93.84 54.84 32.32 40.61 55 E7b_E8a KnownJunction 0 31.86 31.97 293.13 113.74 11.63 22.03 21.11 133.70 52.89 191.87 120.93 18.01 0.00 118.37 142.16 96.56 154.75 176.38 31.06 74.85 20.20 14.14 23.73 56 ER8a ExonRegion 0 69.72 37.71 287.47 128.67 43.00 69.24 44.88 134.89 76.97 221.39 205.27 38.69 24.75 264.87 296.85 218.08 183.82 182.02 39.87 103.65 50.83 30.82 35.28 57 E8_Da KnownBoundary 0 23.26 15.39 133.56 60.96 20.12 28.05 17.89 52.37 21.87 68.87 36.64 0.00 13.64 37.97 66.38 43.24 17.86 48.00 18.17 32.21 5.87 0.00 11.35 58 E8a_E8b KnownJunction 0 51.64 47.95 210.25 107.71 66.13 53.83 47.25 158.05 80.93 201.95 171.04 31.51 21.26 245.40 256.88 262.32 196.35 203.33 66.26 72.67 50.66 17.70 23.22 59 E8a_E8c KnownJunction 0 0.00 0.00 9.76 2.06 3.82 16.64 0.00 7.64 1.79 10.64 16.95 0.00 6.33 16.72 13.35 16.66 8.13 1.91 0.00 5.62 0.00 5.45 3.76 60 ER8b ExonRegion 0 21.61 14.92 150.36 67.68 22.80 37.01 22.25 48.30 20.88 58.40 33.98 2.87 11.03 39.21 44.09 46.67 24.45 49.11 12.47 40.10 6.11 4.87 11.71 61 E8_Ab KnownBoundary 0 0.00 0.00 91.92 30.47 3.99 5.22 13.34 18.94 9.46 23.02 6.95 5.70 7.79 14.19 11.00 7.52 22.07 19.94 4.14 25.89 2.90 0.00 0.00 62 E8_Ac KnownBoundary 1 270.20 53.15 370.30 207.30 106.54 83.08 71.37 200.61 134.75 282.05 153.88 30.31 46.26 106.54 87.40 317.87 103.04 262.03 102.87 111.09 71.97 28.72 83.66 63 ER8c ExonRegion 0 68.58 57.75 343.10 149.10 69.03 78.85 71.49 178.03 90.41 232.82 243.16 32.04 52.53 298.51 279.68 377.46 223.14 233.19 79.00 151.49 63.47 30.84 43.46 64 ER8d ExonRegion 0 36.10 34.07 157.95 104.87 41.11 60.64 42.93 106.24 53.37 134.36 110.44 21.21 26.36 161.04 161.28 130.00 97.82 79.28 48.21 82.90 29.47 22.80 22.60 65 E8_Db KnownBoundary 0 12.89 19.80 19.28 15.98 29.37 28.90 16.16 20.45 11.26 7.98 2.16 0.00 0.00 23.31 22.37 16.32 19.64 9.29 11.48 17.96 2.53 2.57 13.49 66 E8_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67 E8_Dd KnownBoundary 0 0.00 0.00 7.30 6.16 0.00 0.00 0.00 5.09 7.12 6.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 ER8e ExonRegion 0 18.63 14.24 79.40 71.96 54.59 47.31 25.95 44.25 28.16 51.84 20.88 0.00 17.82 48.07 38.30 32.69 34.33 46.19 28.67 42.98 12.34 10.42 14.68 69 ER8f ExonRegion 0 11.85 8.13 64.94 57.79 50.30 30.81 17.21 44.59 25.44 44.73 10.44 0.00 17.82 29.56 25.53 11.29 16.50 38.06 29.94 34.89 8.81 10.42 8.81 70 ER8g ExonRegion 0 6.72 11.73 22.18 20.14 9.63 13.38 12.82 15.18 9.01 14.84 2.03 0.83 0.87 2.53 2.70 3.68 5.04 9.36 3.90 10.78 0.40 1.26 1.35