Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SBDS Gene 0 170.70 132.86 286.85 210.52 232.63 296.61 210.14 207.75 226.89 154.61 178.50 294.03 216.35 172.88 190.95 166.11 182.42 60.78 68.33 118.31 167.11 311.24 157.22 2 496763 Transcript 0 1.61 1.38 0.89 0.78 1.84 3.27 3.91 2.75 2.41 1.75 3.46 0.59 0.00 1.83 0.57 2.71 3.61 3.02 0.03 2.48 3.26 7.42 6.45 3 246868 Transcript 0 178.11 184.98 338.79 291.10 175.17 321.25 166.12 205.11 277.92 166.89 252.01 187.57 179.07 215.93 169.00 185.78 215.03 69.68 86.25 158.57 250.13 282.02 174.26 4 420420 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 414306 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 454667 Transcript 0 0.87 2.17 9.01 3.92 2.49 2.91 2.69 6.81 5.13 2.89 3.54 0.00 0.00 3.04 2.64 1.39 3.85 3.54 4.41 3.46 6.99 1.14 1.17 7 490953 Transcript 0 0.00 0.19 0.98 1.97 1.55 0.77 2.35 0.02 2.03 0.35 1.30 0.11 0.00 0.17 0.23 0.04 0.22 0.02 0.00 0.36 0.00 0.11 0.00 8 463579 Transcript 1 24.26 16.43 19.51 13.47 22.54 48.53 22.71 15.36 12.21 9.31 26.02 30.97 18.40 25.36 17.85 11.32 35.55 7.25 9.31 12.77 20.43 17.07 15.70 9 ER1a ExonRegion 0 3.22 2.75 1.79 1.56 3.68 6.53 5.57 3.60 3.55 2.10 6.93 1.17 0.00 3.65 1.15 1.49 2.82 6.04 0.07 4.96 6.52 11.72 8.81 10 E1_Ab KnownBoundary 0 14.89 9.34 6.21 3.76 4.33 24.70 24.47 4.93 15.31 8.49 12.06 0.00 0.00 7.89 0.00 8.72 13.93 14.67 9.22 13.04 17.79 34.05 24.84 11 E1_Ac KnownBoundary 0 0.00 0.00 3.13 0.00 4.24 0.00 4.28 0.00 0.00 0.00 10.69 0.00 0.00 0.00 6.30 0.00 4.77 7.59 0.00 6.52 6.30 3.12 17.16 12 E1_Ad KnownBoundary 0 3.78 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 3.26 3.15 3.06 0.00 13 E1_Ae KnownBoundary 0 0.00 0.00 3.46 2.03 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.06 0.00 0.00 0.00 0.00 0.00 14 ER1b ExonRegion 0 28.08 9.90 4.08 2.73 7.67 45.11 25.07 6.91 7.82 4.28 34.79 4.33 0.00 19.38 33.07 6.74 19.59 12.32 10.83 19.29 62.73 46.81 50.12 15 E1_Af KnownBoundary 0 120.84 26.25 25.72 18.75 26.99 182.51 72.38 4.31 22.05 15.77 43.91 0.00 0.00 17.54 16.44 43.75 55.45 28.31 8.75 23.65 91.68 54.01 67.44 16 ER1c ExonRegion 1 78.10 20.54 7.47 6.27 14.72 118.65 54.68 7.61 13.09 7.11 56.44 4.33 0.00 40.12 71.37 13.37 48.52 16.63 14.65 30.00 112.39 69.38 80.46 17 ER1d ExonRegion 1 94.19 31.52 11.64 9.20 22.74 143.49 66.53 9.51 16.37 10.04 63.79 4.33 0.00 50.35 95.02 21.55 64.37 16.63 15.93 29.79 126.71 72.92 96.18 18 ER1e ExonRegion 1 117.11 56.26 14.91 10.68 28.54 171.46 80.76 12.68 22.64 15.29 74.09 0.00 0.00 79.31 123.30 37.15 84.72 15.40 16.99 34.04 150.95 103.13 109.15 19 ER1f ExonRegion 1 46.84 44.11 78.17 41.78 30.79 112.89 62.60 38.89 70.48 45.65 64.11 13.99 16.31 93.61 106.68 77.20 74.28 29.42 19.41 64.99 136.37 107.66 95.52 20 E1_Da KnownBoundary 0 0.00 0.00 6.95 1.53 0.00 2.78 1.94 6.16 6.83 1.05 0.00 0.00 0.00 4.47 0.00 11.19 3.65 8.46 4.61 3.20 3.15 0.00 0.00 21 E1a_E2b KnownJunction 0 83.72 54.66 159.25 161.02 140.66 259.06 132.80 108.39 170.80 106.29 129.03 45.16 81.49 114.19 132.27 177.99 131.93 145.05 47.25 109.87 271.76 189.09 192.24 22 E1a_E3a KnownJunction 0 2.89 2.70 0.00 0.00 0.00 0.00 0.00 0.00 3.53 1.67 2.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.18 23 ER1g ExonRegion 0 1.73 4.33 13.91 3.82 4.98 3.10 5.38 9.19 7.71 3.03 4.40 0.00 0.00 6.07 5.29 2.79 7.70 7.07 4.01 4.10 7.80 2.29 2.34 24 E1b_E2b KnownJunction 0 0.00 0.00 4.11 4.03 0.00 2.73 0.00 4.44 2.55 2.74 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 2.81 6.18 0.00 0.00 25 E2_Aa NovelBoundary 0 103.50 12.37 42.64 12.49 87.18 74.45 42.53 56.23 34.55 23.50 26.90 32.41 21.10 52.15 18.42 47.17 45.16 10.28 9.60 8.63 32.06 28.17 11.52 26 E2_Ab NovelBoundary 0 27.71 21.11 27.59 10.12 33.02 47.25 22.70 23.21 38.25 11.36 27.16 18.61 19.80 15.13 9.27 4.36 21.22 7.13 27.11 11.76 8.46 3.12 12.04 27 ER2a ExonRegion 0 24.26 16.43 19.51 13.47 22.54 48.53 22.71 15.36 12.21 9.31 26.02 30.97 18.40 25.36 17.85 11.32 35.55 7.25 9.31 12.77 20.43 17.07 15.70 28 ER2b ExonRegion 0 193.67 171.22 360.78 300.26 249.88 488.34 215.24 222.81 293.89 176.80 292.22 225.24 192.33 228.42 211.48 278.67 271.25 138.34 110.75 187.18 311.67 337.43 249.64 29 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E2b_E3a KnownJunction 0 248.78 276.86 527.92 434.68 240.92 472.97 246.83 294.38 426.64 250.57 352.88 273.99 264.59 320.74 263.68 259.59 323.80 105.91 120.57 225.56 372.83 421.41 259.93 31 ER2c ExonRegion 0 235.46 255.72 467.79 415.17 238.48 461.66 230.53 284.33 388.44 236.41 401.08 257.06 251.50 306.55 222.67 290.53 315.65 102.55 136.97 240.42 376.83 399.51 261.73 32 ER3a ExonRegion 0 265.69 206.77 488.00 415.02 340.02 475.76 299.12 329.47 399.91 249.67 357.10 435.25 409.20 308.24 281.39 336.32 367.32 144.06 132.34 236.49 366.07 494.64 292.86 33 E3a_E4a KnownJunction 0 260.34 133.86 410.16 337.95 392.78 345.48 235.39 264.76 312.50 238.59 252.27 361.62 280.18 306.96 279.75 261.73 323.98 108.40 130.83 174.43 326.62 428.76 182.76 34 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 1.89 1.27 1.40 0.00 0.00 0.00 0.00 0.00 3.93 4.39 0.00 0.00 0.00 0.00 3.12 4.10 35 ER4a ExonRegion 0 232.60 221.75 475.53 325.09 408.94 526.63 343.92 299.21 367.65 240.14 318.87 575.29 424.06 311.04 285.96 349.31 384.46 140.31 163.48 220.19 402.42 526.06 323.07 36 E4_Da KnownBoundary 0 0.00 0.00 3.40 3.30 8.66 5.11 9.23 0.00 4.22 1.34 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 37 E4a_E5a KnownJunction 0 643.15 396.90 557.17 357.70 826.15 913.11 554.11 377.96 385.67 279.55 426.11 976.97 653.20 415.74 514.00 463.72 537.82 174.39 233.79 292.04 477.35 752.19 421.95 38 ER4b ExonRegion 0 0.00 0.19 0.98 1.97 1.55 0.77 2.35 0.02 2.03 0.35 1.30 0.11 0.00 0.17 0.23 0.04 0.22 0.02 0.00 0.36 0.00 0.11 0.00 39 ER5a ExonRegion 0 358.65 255.12 433.62 290.76 450.22 574.93 397.00 334.34 355.95 237.87 334.33 701.02 494.34 412.81 383.53 368.98 374.07 131.76 167.80 225.91 339.19 538.59 309.82 40 E5_Da KnownBoundary 0 334.95 224.04 415.60 313.85 443.89 541.11 449.84 372.17 389.06 255.30 281.97 663.07 419.94 472.37 396.56 346.58 358.95 106.12 129.42 244.29 283.50 618.70 285.03 41 ER5b ExonRegion 0 246.83 184.03 411.85 292.36 353.91 378.58 318.21 325.61 318.17 231.61 211.43 454.99 302.71 201.82 267.24 172.42 200.09 45.42 70.34 128.93 121.52 450.26 167.37 42 E5_Db KnownBoundary 0 58.53 6.31 151.35 140.91 19.02 18.74 24.07 79.27 77.57 75.64 4.63 19.66 6.49 9.54 25.59 7.78 4.58 0.00 9.04 13.87 0.00 47.95 0.00 43 E5_Dc KnownBoundary 0 50.53 19.14 34.06 23.81 45.59 49.57 8.97 57.34 21.47 32.02 0.00 24.46 14.28 11.65 50.31 8.46 0.00 0.00 4.80 5.94 0.00 55.48 0.00 44 E5_Dd KnownBoundary 0 226.48 93.54 15.14 9.89 170.80 107.44 99.23 20.62 13.17 8.43 5.05 113.29 85.71 67.93 66.88 16.66 21.69 3.94 4.33 30.62 2.78 118.12 4.01 45 ER5c ExonRegion 1 332.29 95.58 164.20 163.55 185.96 141.20 110.55 153.83 104.98 101.50 13.53 129.88 117.25 72.27 81.24 32.69 16.50 1.85 25.48 36.17 2.20 159.39 5.87 46 ER5d ExonRegion 1 288.86 90.62 126.95 140.92 182.16 133.50 99.51 134.96 88.73 80.79 11.37 121.74 107.87 75.55 87.73 32.57 16.77 1.85 22.93 32.43 2.20 135.10 2.94 47 ER5e ExonRegion 0 50.09 22.37 20.66 23.46 46.12 29.12 20.99 36.63 18.67 13.71 2.07 31.65 21.11 20.49 20.65 7.22 5.66 0.57 1.21 9.73 0.73 25.15 1.12