Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	STAG3L4	Gene	0	28.39	54.60	45.42	76.37	53.80	37.60	44.03	42.34	32.32	40.76	48.88	42.58	43.39	43.49	39.37	37.16	29.04	47.50	41.10	57.37	10.13	17.57	17.13
2	416602	Transcript	1	9.96	23.23	21.19	38.80	29.25	16.62	21.22	19.97	16.23	18.04	8.26	26.46	23.75	9.52	9.55	5.45	6.51	8.53	14.40	25.34	1.13	5.43	5.15
3	473286	Transcript	0	5.38	2.62	8.78	6.10	4.72	1.05	4.11	5.58	7.73	1.80	3.03	3.85	8.18	3.94	5.30	9.16	5.53	2.18	4.28	4.20	0.00	3.61	2.52
4	352103	Transcript	0	6.89	0.00	6.62	1.43	0.00	0.00	4.15	4.81	3.44	1.18	12.27	0.00	13.15	9.30	15.20	8.20	0.00	10.40	0.00	0.00	0.00	2.88	0.00
5	472361	Transcript	0	30.51	8.96	4.14	16.15	15.16	5.32	17.46	13.83	9.27	6.34	42.72	26.42	16.60	21.49	24.32	36.55	24.52	11.68	10.38	13.63	2.84	19.40	13.97
6	418651	Transcript	0	0.00	6.31	3.37	12.59	0.00	24.08	12.41	4.07	3.18	2.69	0.00	0.00	0.00	2.47	0.00	3.50	3.65	12.73	4.42	25.63	0.00	0.00	8.71
7	495164	Transcript	0	0.00	0.00	1.43	2.63	0.00	1.45	0.00	2.01	0.90	0.83	0.00	0.00	2.92	3.08	0.00	10.85	4.16	6.27	4.42	1.63	1.51	0.00	1.92
8	437742	Transcript	0	3.26	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	2.66	0.00	0.00	0.00	0.00	4.45	0.00	0.00	1.82	0.00	0.00	0.00	0.00	0.00
9	ER1a	ExonRegion	0	0.34	1.38	0.10	0.16	0.43	0.73	0.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.12	0.00	0.59	0.25	0.26	0.00	0.00	0.00
10	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Af	KnownBoundary	0	26.82	30.39	3.43	23.84	6.28	14.71	38.47	1.60	5.18	2.39	2.00	0.00	0.00	0.00	8.90	6.66	4.68	39.13	19.20	13.49	0.00	0.00	3.33
14	ER1b	ExonRegion	0	9.61	51.78	1.23	6.19	10.50	23.56	21.29	0.00	0.29	0.71	0.00	0.00	0.00	1.50	0.00	2.97	1.78	14.92	12.74	2.13	0.00	0.00	2.71
15	ER1c	ExonRegion	0	10.58	56.94	1.23	8.18	10.70	27.51	33.10	0.00	1.24	1.15	0.00	0.00	0.00	1.62	0.00	2.97	3.30	18.48	15.93	2.13	0.00	0.00	2.94
16	ER1d	ExonRegion	0	23.52	70.95	1.23	10.45	14.27	33.01	41.34	1.15	1.24	1.40	0.00	0.00	0.00	3.07	4.84	8.26	3.30	24.64	21.94	5.67	0.00	0.00	4.89
17	ER1e	ExonRegion	1	67.02	126.76	3.68	15.45	37.46	80.08	80.32	6.34	3.29	6.12	1.29	0.00	0.00	21.65	20.31	35.67	3.30	68.98	40.35	20.57	0.00	4.17	19.58
18	ER1f	ExonRegion	1	88.11	140.08	24.43	33.52	45.20	82.38	81.86	19.56	12.92	21.14	13.24	0.00	0.00	32.05	35.80	65.92	7.55	144.79	51.75	47.89	6.35	11.53	30.90
19	E1_Da	KnownBoundary	0	10.30	0.00	23.12	8.46	12.39	8.29	14.00	6.74	4.86	8.41	22.80	5.55	13.47	7.53	4.45	19.65	13.00	16.33	16.38	15.53	2.97	2.82	3.67
20	E1a_E2a	KnownJunction	0	3.26	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	2.66	0.00	0.00	0.00	0.00	4.45	0.00	0.00	1.82	0.00	0.00	0.00	0.00	0.00
21	ER1g	ExonRegion	0	7.90	15.44	25.13	24.08	4.95	9.25	6.63	13.61	10.70	19.98	16.62	4.11	3.56	34.42	26.91	27.22	11.55	53.03	32.57	32.54	5.01	10.11	13.95
22	E1_Db	NovelBoundary	1	0.00	3.35	1.51	4.86	0.00	5.34	0.00	6.78	4.60	1.56	5.37	0.00	0.00	4.94	8.90	46.65	0.00	18.07	56.57	18.92	2.47	0.00	94.84
23	E1b_E2a	KnownJunction	1	13.78	27.23	62.71	70.52	19.61	23.79	8.17	29.04	30.21	51.60	50.75	6.30	19.80	122.90	92.96	125.61	25.99	222.19	132.05	121.12	7.60	36.31	56.68
24	E1b_E3c	KnownJunction	0	0.00	0.00	0.00	3.90	0.00	2.90	0.00	4.03	1.79	1.67	0.00	0.00	5.84	4.53	0.00	21.70	8.32	11.32	8.85	3.26	3.03	0.00	3.84
25	I1_SR2	SilentIntronRegion	0	16.97	14.78	8.62	14.39	97.31	35.08	71.71	8.74	4.89	4.29	8.31	11.16	29.45	9.72	12.59	17.60	13.21	7.48	16.04	13.85	2.29	4.63	16.98
26	ER2a	ExonRegion	0	12.74	40.21	69.38	101.92	62.87	56.53	49.26	53.19	38.70	66.84	77.28	25.62	18.52	87.20	71.69	97.19	40.26	196.76	103.57	118.67	28.22	37.42	37.18
27	E2_Da	NovelBoundary	1	3.78	6.64	2.63	3.60	20.46	13.97	40.36	4.48	1.79	0.00	0.00	19.81	0.00	4.59	5.69	21.11	0.00	2.11	4.71	9.33	0.00	0.00	4.18
28	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E2a_E3b	KnownJunction	0	15.04	0.00	5.03	6.06	7.81	5.74	18.06	2.55	0.00	0.00	22.43	12.00	0.00	31.79	4.45	24.18	4.58	2.20	0.00	0.00	0.00	5.33	0.00
30	E2a_E3c	KnownJunction	0	13.48	63.08	61.97	100.42	90.92	137.70	134.08	63.05	43.63	73.39	63.07	23.71	6.49	98.59	44.26	46.14	42.36	88.75	67.95	104.76	27.43	27.68	19.72
31	E2a_E4a	KnownJunction	0	0.00	6.31	3.37	12.59	0.00	24.08	12.41	4.07	3.18	2.69	0.00	0.00	0.00	2.47	0.00	3.50	3.65	12.73	4.42	25.63	0.00	0.00	8.71
32	E3_Aa	NovelBoundary	0	6.08	0.00	8.37	22.31	10.53	15.10	24.51	23.17	45.34	7.44	4.63	0.00	6.82	9.48	0.00	12.30	8.32	17.82	4.61	11.25	2.29	11.39	4.10
33	ER3a	ExonRegion	0	10.77	5.24	17.57	12.21	9.45	2.10	8.23	11.16	15.46	3.59	6.05	7.70	16.35	7.89	10.60	18.33	11.07	4.36	8.55	8.39	0.00	7.22	5.05
34	E3_Ab	KnownBoundary	0	0.00	6.45	13.16	10.52	12.05	0.00	9.63	5.83	7.93	0.00	14.90	12.15	25.32	7.30	5.19	32.47	17.95	1.58	0.00	0.00	0.00	2.63	8.62
35	ER3b	ExonRegion	0	25.99	16.24	30.62	17.14	22.69	8.51	25.97	16.75	17.59	4.21	40.87	13.51	21.45	29.10	27.85	37.45	18.84	13.06	8.41	6.01	1.50	6.72	10.22
36	E3_Da	KnownBoundary	0	35.34	28.74	22.62	10.75	33.19	8.69	23.94	11.71	4.80	7.12	19.79	12.60	13.64	18.19	17.68	40.50	13.93	4.19	8.85	6.01	0.00	9.12	8.19
37	E3a_E3c	KnownJunction	0	6.89	0.00	6.62	1.43	0.00	0.00	4.15	4.81	3.44	1.18	12.27	0.00	13.15	9.30	15.20	8.20	0.00	10.40	0.00	0.00	0.00	2.88	0.00
38	ER3c	ExonRegion	0	25.34	8.27	6.96	11.58	11.26	5.63	10.25	11.71	7.07	5.16	35.07	22.85	19.61	16.72	21.08	31.10	23.15	4.08	7.36	9.17	1.38	13.87	9.64
39	E3_Db	KnownBoundary	0	42.90	8.29	2.78	12.92	11.04	9.71	18.55	13.43	7.06	8.14	37.75	38.56	26.62	24.02	16.56	35.72	17.86	10.36	7.72	5.69	0.00	12.19	20.49
40	ER3d	ExonRegion	0	30.51	8.96	4.14	16.15	15.16	5.32	17.46	13.83	9.27	6.34	42.72	26.42	16.60	21.49	24.32	36.55	24.52	11.68	10.38	13.63	2.84	19.40	13.97
41	E3_Ac	KnownBoundary	0	48.75	0.00	1.60	9.32	11.63	13.00	21.11	7.02	3.12	4.03	32.80	13.35	0.00	25.31	25.22	35.38	16.55	15.46	18.17	3.13	0.00	8.94	12.38
42	ER3e	ExonRegion	0	65.53	121.98	73.47	119.85	79.16	78.46	72.62	73.54	53.07	90.43	151.63	48.73	50.95	138.17	109.02	105.51	89.04	138.80	107.91	101.22	50.89	37.70	34.84
43	E3_Dc	NovelBoundary	0	6.67	3.09	0.00	0.00	0.00	0.00	1.99	0.00	2.95	0.00	2.68	0.00	0.00	2.47	8.90	8.29	0.00	1.70	13.08	3.26	0.00	0.00	11.78
44	E3c_E4a	KnownJunction	0	52.45	183.91	111.35	149.93	104.84	81.83	75.34	64.24	48.90	91.55	167.20	67.67	52.92	158.63	74.42	144.41	60.96	173.77	146.73	97.15	38.61	44.46	51.47
45	ER4a	ExonRegion	0	30.59	98.35	89.79	132.33	84.39	51.45	61.68	73.99	48.62	85.58	127.34	47.82	48.41	127.51	101.62	92.74	71.73	125.50	82.00	106.24	33.40	28.79	37.62
46	E4_Da	NovelBoundary	0	3.48	9.74	3.25	1.60	3.65	8.52	11.92	7.02	1.33	0.00	3.95	6.90	0.00	9.54	4.45	0.00	0.00	14.59	4.33	14.45	9.45	0.00	3.76
47	E4a_E5a	KnownJunction	1	41.93	135.77	111.85	145.67	83.53	76.04	95.57	92.83	67.97	102.21	129.19	32.86	110.54	91.00	101.74	90.06	93.03	106.00	42.26	72.35	16.56	40.17	22.79
48	E4_Db	NovelBoundary	0	0.00	5.72	4.32	9.19	7.72	0.00	10.64	6.08	4.11	9.37	8.84	6.30	0.00	0.00	0.00	14.18	8.32	14.14	16.38	19.56	2.72	0.00	3.67
49	ER4b	ExonRegion	0	0.00	0.00	2.86	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00	1.23	0.00	0.00	0.00	0.00	0.00
50	I4	Intron	0	7.87	14.98	5.15	9.94	8.15	4.30	13.81	9.32	3.31	4.39	8.64	13.64	17.89	8.13	6.40	6.68	5.77	6.96	11.86	20.61	2.20	5.20	8.50
51	I4_AR1	ActiveIntronRegion	0	5.01	8.29	3.60	8.82	8.44	2.66	14.26	12.53	2.90	6.29	14.74	11.85	8.45	10.91	8.46	10.16	10.41	12.09	16.77	24.61	5.22	5.49	11.19
52	I4_SR1	SilentIntronRegion	0	8.37	16.78	4.73	9.90	8.76	4.50	13.90	8.43	3.14	4.14	7.58	14.65	21.46	7.52	5.40	5.78	4.50	5.62	10.75	19.15	1.20	5.04	7.71
53	I4_AR4	ActiveIntronRegion	0	10.31	14.53	13.04	13.19	1.74	6.55	12.04	10.03	5.98	2.21	3.77	8.60	7.35	7.20	10.92	6.76	6.41	7.17	10.35	24.85	4.28	6.08	9.54
54	E5_Aa	NovelBoundary	1	56.75	28.74	26.05	34.23	21.31	14.03	29.85	30.31	6.97	8.62	4.69	6.30	47.56	15.19	8.90	11.36	8.32	9.33	14.21	20.58	0.00	0.00	3.24
55	ER5a	ExonRegion	0	42.76	87.39	114.20	201.50	124.15	91.23	95.91	115.69	71.91	100.83	146.77	78.25	121.39	101.34	94.84	82.78	77.31	73.86	73.60	134.02	18.60	44.22	33.94
56	E5_Da	KnownBoundary	0	70.98	159.25	136.04	235.80	166.30	94.43	95.83	106.67	87.88	99.82	173.31	86.13	127.43	87.53	84.18	67.67	69.66	70.22	54.03	147.97	5.31	48.01	26.12
57	ER5b	ExonRegion	0	47.67	119.83	60.50	127.59	83.93	56.83	68.51	60.74	56.09	56.23	93.31	92.60	101.99	47.94	53.11	28.48	40.33	44.48	58.55	97.46	11.30	24.63	21.15
58	E5_Db	KnownBoundary	0	31.64	102.09	26.61	54.70	43.46	64.45	53.00	37.30	25.98	23.45	27.22	28.66	26.30	33.67	33.62	12.22	20.85	9.95	21.27	55.54	8.71	16.96	10.67
59	E5_Dc	KnownBoundary	0	10.82	36.57	19.63	34.56	53.90	17.26	44.60	18.48	23.00	14.77	20.64	15.30	26.62	17.13	8.90	8.12	14.31	13.22	21.46	62.77	0.00	2.88	3.24
60	ER5c	ExonRegion	0	25.40	80.97	29.63	70.87	75.65	57.35	61.99	39.75	41.77	32.11	44.81	55.50	39.65	42.37	18.99	15.67	23.11	19.32	23.17	87.23	6.01	13.45	4.81
61	ER5d	ExonRegion	1	19.57	45.07	42.28	77.43	58.06	32.51	42.24	39.94	32.46	36.07	16.53	52.91	47.51	19.04	19.09	10.79	13.02	16.48	28.54	50.43	2.25	10.87	10.30
62	IG15	Intergenic	0	9.64	22.53	19.60	46.47	29.81	15.48	22.62	27.71	16.12	16.45	5.77	13.50	16.12	5.60	4.89	4.57	3.42	8.47	9.14	15.86	0.84	2.97	3.96
63	IG15_SR1	SilentIntergenicRegion	0	3.67	14.92	7.23	24.38	18.32	10.68	11.60	10.31	7.62	13.22	2.41	10.63	8.50	1.66	3.01	3.44	1.61	5.52	8.92	9.84	0.49	1.39	3.92
64	IG15_AR1	ActiveIntergenicRegion	0	11.13	45.22	19.94	48.72	42.78	27.17	33.93	26.85	18.38	18.69	4.43	16.73	31.84	6.90	11.03	9.27	3.94	23.84	18.22	29.00	0.40	1.41	6.89
65	IG15_SR2	SilentIntergenicRegion	0	19.70	44.77	24.97	62.03	60.93	29.17	26.40	39.54	25.95	28.94	3.71	18.80	13.84	3.14	5.08	4.67	1.78	12.31	11.34	19.73	0.65	2.45	2.98
66	IG15_AR2	ActiveIntergenicRegion	0	14.15	40.63	36.40	71.58	62.35	37.24	36.85	62.69	32.84	39.54	5.37	21.35	17.45	6.06	4.31	7.19	7.39	10.55	14.84	24.42	1.64	4.60	4.03
67	IG15_SR3	SilentIntergenicRegion	0	9.25	23.12	12.77	24.65	23.74	19.09	21.03	15.90	11.99	8.91	1.32	4.91	7.20	2.62	1.16	1.35	0.50	8.71	5.05	8.21	0.33	2.35	4.95
68	IG15_AR4	ActiveIntergenicRegion	0	9.98	23.99	21.11	66.53	39.50	19.97	24.60	43.59	30.16	34.16	7.36	9.19	7.49	5.41	5.92	2.79	6.20	10.14	10.49	21.43	1.15	2.95	4.26
69	IG15_AR6	ActiveIntergenicRegion	0	8.88	26.89	30.66	63.09	20.22	15.01	49.74	27.03	16.22	10.04	16.63	25.28	23.45	17.08	8.45	13.10	11.08	14.48	16.71	39.74	3.24	3.94	8.63
70	IG15_SR6	SilentIntergenicRegion	0	5.85	11.56	22.14	52.76	19.63	7.15	22.86	30.58	13.72	9.90	9.57	13.03	21.16	8.23	5.00	3.17	3.45	4.79	7.93	12.95	1.24	4.02	4.03
71	IG15_AR8	ActiveIntergenicRegion	0	19.05	9.53	20.53	43.64	19.54	7.08	20.04	15.20	12.75	7.18	3.43	15.58	21.12	10.64	6.03	5.08	2.13	5.66	1.86	9.28	0.71	4.31	2.71
72	IG15_AR9	ActiveIntergenicRegion	0	10.09	16.03	33.53	57.67	15.67	7.93	18.93	31.13	11.83	9.73	11.76	12.73	31.16	6.64	7.60	7.21	5.74	5.17	4.10	12.89	0.00	8.07	3.49