Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC007285.2 Gene 0 1.02 2.29 6.35 5.76 8.02 10.01 7.30 4.14 8.77 5.12 1.55 6.69 5.05 2.09 3.25 2.07 1.24 3.88 5.11 4.90 1.53 0.33 1.10 2 422239 Transcript 0 0.32 0.52 1.20 0.52 0.54 1.67 1.25 0.52 0.81 0.80 0.00 0.18 0.00 0.46 0.84 0.30 0.00 2.28 0.81 0.86 0.11 0.00 0.30 3 419103 Transcript 0 0.00 3.39 2.56 0.36 0.60 1.57 1.19 2.72 5.72 1.56 0.69 3.17 6.72 0.65 0.00 0.00 1.82 0.00 5.55 0.28 0.13 0.00 0.00 4 ER1a ExonRegion 0 1.11 5.67 14.89 19.25 21.82 20.30 18.21 6.58 13.42 10.82 0.00 8.84 0.00 2.13 7.76 3.91 0.00 7.24 10.05 9.51 3.48 0.02 2.32 5 E1_Da NovelBoundary 0 7.56 5.92 36.99 46.51 6.54 0.00 22.70 3.98 15.16 14.64 0.00 0.00 0.00 2.47 5.56 8.63 0.00 10.69 30.31 8.95 5.19 0.00 8.71 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E3a KnownJunction 0 0.00 6.58 3.67 0.00 0.00 0.00 0.00 2.09 4.31 2.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2_Aa NovelBoundary 0 7.56 14.54 10.02 17.11 0.00 4.60 13.78 5.67 13.77 21.46 0.00 18.16 0.00 2.12 4.94 7.78 0.00 13.47 0.00 17.39 2.59 0.00 0.00 9 ER2a ExonRegion 0 0.97 1.57 3.61 1.56 1.63 5.00 3.76 1.57 0.95 2.39 0.00 0.54 0.00 1.38 2.52 0.90 0.00 5.00 2.42 2.59 0.34 0.00 0.89 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 0.00 11 E3_Aa NovelBoundary 0 3.33 0.00 4.97 1.50 0.00 4.66 8.61 1.60 1.68 0.00 2.21 0.00 0.00 2.12 0.00 3.42 4.77 6.43 18.17 3.26 2.84 0.00 0.00 12 ER3a ExonRegion 0 2.16 2.29 7.33 6.10 5.44 11.55 4.95 5.01 12.70 5.24 0.04 2.94 0.19 0.95 3.60 1.01 0.00 2.88 1.15 3.49 1.50 1.39 1.00 13 E3_Da NovelBoundary 0 6.89 2.96 8.46 7.79 31.32 0.00 10.73 2.55 6.11 1.56 0.00 0.00 0.00 0.00 5.69 0.00 0.00 4.60 17.13 3.20 3.15 0.00 3.59 14 E3a_E4a KnownJunction 0 0.00 0.00 1.39 0.00 0.00 4.88 0.00 2.55 8.94 5.64 0.00 12.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 15 Ix Intron 0 1.24 1.43 4.59 4.63 4.85 3.43 5.19 3.01 4.20 1.80 1.81 20.45 20.67 4.05 2.48 3.48 2.32 0.49 0.19 3.36 1.16 1.71 1.89 16 Ix_AR1 ActiveIntronRegion 0 1.50 0.72 5.15 3.94 3.80 5.84 4.16 0.92 3.91 1.21 1.72 12.19 15.85 4.50 1.46 3.70 0.59 0.49 0.57 3.02 0.00 2.95 2.09 17 Ix_SR1 SilentIntronRegion 0 0.56 0.00 1.99 4.88 4.24 2.46 5.36 2.72 3.92 2.71 2.04 19.49 13.90 3.43 2.62 4.71 2.62 0.49 0.00 1.69 2.33 0.55 1.55 18 Ix_SR2 SilentIntronRegion 0 1.38 2.66 5.49 5.05 5.95 2.16 5.89 4.72 4.57 1.79 1.77 27.11 27.66 4.05 3.17 2.73 3.45 0.48 0.00 4.45 1.44 1.36 1.92 19 Ix Intron 0 4.55 3.74 6.05 10.72 6.08 5.96 6.74 3.95 6.67 1.68 3.80 67.30 48.58 12.06 8.66 8.21 5.27 1.81 1.95 6.01 0.54 4.60 1.80 20 Ix_SR1 SilentIntronRegion 0 3.48 3.66 7.15 11.94 5.03 4.60 6.53 4.64 7.07 1.74 3.94 66.65 40.39 11.86 8.84 8.62 5.43 1.80 1.75 5.83 0.52 4.24 2.07 21 Ix_AR1 ActiveIntronRegion 0 8.44 4.06 2.08 6.37 9.91 10.97 7.54 1.47 5.24 1.46 3.30 70.02 78.60 12.88 8.07 6.77 4.70 1.84 2.72 6.67 0.63 5.94 0.84 22 E4_Aa NovelBoundary 0 0.00 0.00 3.67 0.00 0.00 5.79 1.68 2.22 8.56 0.00 2.68 18.91 27.76 7.24 6.30 0.00 4.77 1.78 0.00 9.20 6.05 0.00 0.00 23 ER4a ExonRegion 0 0.50 0.91 3.60 1.27 9.23 9.37 5.96 5.54 14.49 5.37 6.49 17.10 18.58 4.16 0.98 3.54 4.49 0.88 5.95 6.52 2.03 0.50 0.70 24 E4_Da KnownBoundary 0 0.00 2.43 4.67 2.06 4.33 9.94 9.98 10.60 21.50 3.79 2.05 19.66 46.91 5.36 0.00 0.00 4.39 0.00 16.00 2.81 2.35 0.00 0.00 25 ER4b ExonRegion 0 0.00 0.20 1.45 0.73 1.20 3.15 2.38 3.34 7.12 0.76 1.39 6.35 13.44 1.30 0.00 0.00 3.63 0.00 11.10 0.57 0.26 0.00 0.00