Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C7orf41 Gene 0 56.37 278.78 197.83 210.03 337.43 1191.10 198.51 326.57 395.94 150.94 6.49 10.38 10.90 11.34 2.87 3.09 6.55 172.40 182.03 123.81 39.85 43.71 22.38 2 324453 Transcript 0 1.43 4.06 0.31 1.70 2.92 5.33 1.35 3.98 3.41 1.43 0.06 0.00 0.00 0.00 0.00 0.00 0.00 1.59 1.51 0.92 0.03 0.00 0.73 3 409688 Transcript 0 0.00 2.83 2.75 14.35 0.00 18.00 10.07 16.10 13.14 5.13 0.00 0.00 0.00 2.47 0.00 0.00 0.00 19.44 3.67 8.88 5.19 0.00 0.00 4 415604 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 434060 Transcript 0 2.10 4.40 2.46 4.87 3.61 2.04 3.41 2.80 2.91 1.90 0.00 1.46 0.50 0.23 0.00 0.00 0.00 3.01 2.05 2.12 1.03 0.49 0.86 6 324489 Transcript 0 2.33 6.21 3.71 7.29 9.79 4.75 7.48 7.57 6.61 5.21 0.00 1.74 3.72 0.00 1.08 1.56 0.00 4.61 13.89 8.71 4.95 0.43 1.54 7 455738 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 0.74 1.00 0.00 0.00 0.49 1.50 0.05 0.18 0.02 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00 2.26 1.42 0.78 0.06 0.00 0.00 9 E1_Ab KnownBoundary 0 3.11 3.03 0.00 0.00 4.16 21.75 0.00 5.96 1.36 0.00 2.21 0.00 0.00 0.00 0.00 0.00 0.00 16.62 13.18 2.62 0.00 0.00 0.00 10 ER1b ExonRegion 0 5.51 7.00 3.61 1.38 6.75 109.17 9.68 10.20 15.14 5.26 3.17 0.00 0.00 1.32 0.14 0.00 3.26 38.69 18.96 9.21 14.60 1.27 4.55 11 E1_Ac KnownBoundary 0 17.63 18.22 21.82 8.76 11.21 94.66 11.57 22.59 36.69 10.23 2.53 0.00 0.00 0.00 0.00 0.00 12.62 67.82 35.39 24.54 19.34 8.14 4.35 12 ER1c ExonRegion 0 11.70 39.57 40.85 32.18 23.30 155.43 27.02 88.73 137.03 50.84 6.17 1.61 5.68 12.64 0.94 0.17 8.49 158.87 68.06 81.43 48.37 23.63 13.55 13 E1a_E4a KnownJunction 0 6.82 75.32 64.72 43.88 52.29 296.25 44.03 115.79 191.06 91.95 4.90 0.00 0.00 13.83 4.45 3.42 0.00 129.83 70.87 105.72 55.17 20.33 11.87 14 E1a_E5a KnownJunction 0 0.00 2.83 2.75 14.35 0.00 18.00 10.07 16.10 13.14 5.13 0.00 0.00 0.00 2.47 0.00 0.00 0.00 19.44 3.67 8.88 5.19 0.00 0.00 15 ER2a ExonRegion 0 4.21 8.80 4.91 9.74 7.23 4.08 6.81 3.87 5.83 3.80 0.00 2.92 1.00 0.47 0.00 0.00 0.00 6.03 4.10 4.23 2.06 0.97 1.72 16 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER3a ExonRegion 0 2.33 6.21 3.71 7.29 9.79 4.75 7.48 7.57 6.61 5.21 0.00 1.74 3.72 0.00 1.08 1.56 0.00 4.61 13.89 8.71 4.95 0.43 1.54 18 E3_Ab KnownBoundary 0 9.93 17.76 3.40 13.88 23.60 2.10 13.87 17.09 15.74 1.21 0.00 0.00 20.45 0.00 0.00 0.00 0.00 15.46 25.13 8.63 5.56 3.06 0.00 19 ER3b ExonRegion 0 3.24 8.69 1.70 5.30 6.69 1.63 5.72 7.22 7.81 0.28 0.00 0.21 0.53 0.00 0.00 0.00 0.00 9.36 7.09 5.63 3.13 1.04 2.42 20 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 13.96 75.76 59.16 51.81 86.93 554.98 86.90 116.69 212.57 83.83 8.90 6.00 0.43 10.10 2.95 3.60 8.24 204.37 90.15 119.20 62.33 36.07 12.68 22 E4b_E5a KnownJunction 0 7.41 93.93 61.68 55.34 94.48 523.45 90.45 161.83 299.48 96.11 0.00 6.00 5.84 16.66 0.00 0.00 0.00 273.47 117.65 165.16 58.87 29.02 12.80 23 ER4b ExonRegion 0 11.11 86.94 63.11 62.01 95.66 487.79 84.73 135.68 285.00 92.33 4.83 4.33 4.69 16.65 0.00 0.00 4.13 285.48 107.51 137.23 72.17 31.25 19.09 24 E5_Aa NovelBoundary 0 0.00 6.71 8.84 9.22 3.57 8.69 10.29 3.82 15.65 4.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.17 4.33 10.99 14.76 0.00 4.35 25 ER5a ExonRegion 0 9.42 83.72 78.09 69.03 67.96 404.42 81.78 184.28 315.53 131.52 14.06 5.43 5.25 27.56 6.68 2.37 17.11 258.52 199.71 151.56 95.76 61.69 31.24 26 E5_Da KnownBoundary 0 23.19 118.07 66.17 68.52 84.38 490.40 97.42 144.70 286.89 136.08 9.79 0.00 6.82 35.43 0.00 0.00 4.30 208.93 131.96 138.64 64.43 46.05 33.12 27 E5a_E5b KnownJunction 0 0.00 8.75 9.02 21.14 10.10 19.14 16.30 15.65 34.87 11.39 2.00 0.00 0.00 2.12 4.45 4.36 4.21 26.16 36.14 15.34 22.30 9.12 7.60 28 ER5b ExonRegion 0 48.40 180.78 81.94 92.64 202.78 837.98 174.43 222.53 381.41 130.43 14.23 5.42 18.16 24.74 5.48 5.36 14.68 166.64 176.55 157.66 43.36 55.72 25.75 29 E5_Db KnownBoundary 0 57.86 200.89 158.63 142.97 304.58 1170.92 398.52 309.12 489.75 150.86 14.53 12.60 39.61 10.12 5.19 26.49 13.09 181.36 210.17 237.00 21.13 71.89 27.15 30 ER5c ExonRegion 0 39.51 265.12 117.47 153.55 312.93 1190.55 245.95 305.77 461.26 166.97 8.26 19.88 33.04 14.64 4.30 3.14 8.72 130.96 143.09 157.17 31.95 63.58 22.85 31 E5_Ab KnownBoundary 0 47.05 192.79 103.57 172.87 334.64 1354.45 220.81 252.77 482.26 146.05 5.05 12.30 0.00 19.25 10.75 10.94 0.00 166.60 125.65 188.43 64.99 32.21 13.06 32 ER5d ExonRegion 0 30.39 384.50 160.05 203.57 336.93 1277.25 225.95 333.59 496.11 188.07 6.12 18.34 7.30 14.68 3.10 4.14 6.02 213.53 212.00 165.70 46.82 47.00 30.45 33 E5_Dc KnownBoundary 0 17.93 397.89 217.76 246.29 436.67 1656.43 264.89 388.81 468.02 192.79 4.63 25.21 0.00 14.60 0.00 3.42 4.58 382.70 390.03 210.99 93.28 37.90 53.52 34 ER5e ExonRegion 0 96.17 383.61 339.06 338.99 515.53 1720.58 259.41 480.56 495.37 193.45 6.39 8.86 7.52 9.91 2.72 3.56 6.07 221.63 253.19 133.41 47.01 48.39 26.21 35 ER5f ExonRegion 0 2.12 7.12 0.61 3.41 5.35 9.17 2.65 7.78 6.79 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 1.59 1.06 0.00 0.00 1.47