Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	TMED4	Gene	0	88.33	143.19	166.04	167.69	155.55	129.95	97.01	133.63	105.48	135.78	84.69	80.20	75.66	116.49	112.31	89.76	75.08	127.48	89.18	103.82	94.82	88.50	84.32
2	289577	Transcript	0	0.00	0.00	7.88	9.51	2.30	3.06	0.00	2.75	0.00	5.12	3.47	0.00	0.00	4.94	4.85	1.02	0.00	1.49	0.00	6.33	0.00	0.00	0.00
3	457408	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	444131	Transcript	0	0.00	0.00	1.45	1.53	0.00	0.00	0.00	0.00	1.68	0.00	2.68	0.00	0.00	0.00	0.00	4.36	0.00	4.19	0.00	0.00	0.00	0.00	0.00
5	481238	Transcript	0	12.40	11.62	24.86	11.49	32.49	1.83	3.97	15.56	18.00	9.18	0.55	6.18	7.37	9.51	8.29	10.61	0.47	13.99	2.73	12.46	1.26	2.08	5.03
6	419520	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	477639	Transcript	0	0.77	0.37	2.03	2.00	0.88	3.54	1.97	2.55	2.49	2.29	1.48	0.97	0.08	3.27	3.04	1.37	0.93	4.55	0.57	1.96	4.50	1.80	2.40
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	1.20	0.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.80	2.05	0.00	1.15	0.00	0.00	0.00	0.00	0.00
9	E1_Ac	KnownBoundary	0	0.00	0.00	1.83	0.00	4.33	8.06	2.25	0.00	2.75	1.40	0.00	0.00	0.00	0.00	4.45	17.43	0.00	2.57	0.00	0.00	0.00	0.00	0.00
10	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	8.46	0.00	2.55	1.68	3.33	0.00	0.00	6.01	7.36	0.00	8.46	0.00	2.57	4.52	3.20	0.00	0.00	4.18
11	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	2.68	4.08	0.00	0.00	1.24	0.19	0.32	0.00	0.00	1.62	4.19	7.27	0.00	1.85	1.42	0.00	0.00	0.00	1.47
12	E1_Ae	KnownBoundary	0	103.65	37.23	46.21	84.07	37.18	154.00	13.69	49.45	28.21	57.91	30.64	0.00	6.33	46.74	61.31	53.23	23.66	156.74	41.70	66.60	60.54	56.95	63.42
13	ER1c	ExonRegion	0	0.00	0.00	1.23	0.68	2.68	11.55	0.00	0.00	1.24	2.18	1.93	0.00	0.00	6.50	7.25	8.92	0.00	1.85	3.19	0.00	0.00	0.00	2.94
14	ER1d	ExonRegion	0	38.70	15.78	27.37	42.38	5.73	49.69	3.03	27.08	15.64	29.49	15.83	0.00	2.01	30.39	33.57	20.66	13.20	51.65	24.27	29.99	32.22	26.59	21.68
15	ER1e	ExonRegion	1	58.57	60.08	137.70	131.32	14.77	72.13	27.29	92.05	80.96	134.79	67.19	1.94	3.25	39.34	38.48	40.54	68.30	131.95	40.23	85.26	130.84	37.18	50.77
16	E1_Da	KnownBoundary	0	17.19	15.39	101.21	62.83	26.91	30.72	15.50	67.61	41.78	76.37	69.49	11.70	6.17	18.13	13.97	12.73	53.58	54.88	7.06	46.08	131.52	23.82	17.33
17	E1a_E1g	KnownJunction	0	0.00	0.00	1.45	1.53	0.00	0.00	0.00	0.00	1.68	0.00	2.68	0.00	0.00	0.00	0.00	4.36	0.00	4.19	0.00	0.00	0.00	0.00	0.00
18	E1_Db	KnownBoundary	0	0.00	0.00	1.36	0.00	8.15	2.84	3.89	3.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00
19	E1b_E1f	KnownJunction	1	18.82	39.07	363.68	357.46	37.18	88.53	47.87	242.67	184.55	321.43	231.80	18.01	19.80	200.72	217.20	67.67	220.76	295.77	80.94	298.17	461.29	124.24	79.64
20	ER1f	ExonRegion	1	23.89	29.05	293.21	295.94	43.58	76.50	34.61	205.19	157.04	267.39	223.66	24.12	18.76	168.44	163.71	80.25	198.53	275.84	90.56	249.54	399.19	143.76	101.52
21	ER1g	ExonRegion	0	0.77	0.37	2.03	2.00	0.88	3.54	1.97	2.55	2.49	2.29	1.48	0.97	0.08	3.27	3.04	1.37	0.93	4.55	0.57	1.96	4.50	1.80	2.40
22	E1_Af	KnownBoundary	0	10.74	0.00	1.63	3.16	7.72	29.24	8.97	7.64	7.52	5.75	2.68	0.00	0.00	0.00	0.00	4.27	4.58	2.24	0.00	6.26	2.97	0.00	0.00
23	E1_Ag	KnownBoundary	1	36.30	27.23	219.51	297.83	30.14	82.96	41.12	169.10	136.51	229.05	139.40	30.46	0.00	92.53	88.39	131.85	114.91	294.40	175.72	200.64	195.83	178.99	193.77
24	E1c_E1h	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER1h	ExonRegion	1	28.71	33.17	296.23	314.66	26.92	101.89	44.52	213.14	161.95	268.52	205.37	28.95	13.19	183.93	165.73	107.93	174.95	315.85	136.17	268.75	354.80	166.42	153.62
26	ER1i	ExonRegion	1	29.63	34.57	296.54	332.54	21.41	108.19	48.99	200.50	154.39	262.64	164.30	25.98	9.38	168.91	139.26	115.91	145.24	323.36	140.16	246.81	275.46	164.60	164.45
27	ER1j	ExonRegion	1	44.14	52.75	255.39	322.41	31.77	118.43	54.64	192.54	146.75	215.64	79.81	14.25	1.86	105.67	89.21	102.54	61.89	395.00	110.69	159.04	120.42	123.49	121.69
28	E1_Ah	KnownBoundary	0	79.20	87.09	212.59	274.16	100.51	165.87	71.46	172.72	125.11	151.61	51.75	26.86	25.97	93.59	104.33	118.94	62.65	382.90	107.58	188.88	84.51	85.42	132.31
29	ER1k	ExonRegion	1	42.87	59.50	228.06	232.20	66.66	189.98	39.87	159.17	130.92	163.09	105.65	26.84	23.85	139.86	158.49	143.68	99.31	390.46	98.38	211.12	152.24	79.05	154.05
30	E1d_E2a	KnownJunction	0	53.49	69.86	322.31	304.52	123.26	276.49	28.93	213.42	180.09	242.13	162.15	57.32	59.41	169.93	260.59	181.15	139.69	534.71	105.98	252.54	235.37	83.83	178.58
31	ER2a	ExonRegion	0	72.11	152.16	258.66	217.98	106.88	244.88	88.41	177.96	159.93	181.47	103.76	48.24	55.28	204.18	198.57	108.44	97.51	250.24	98.34	164.23	189.15	108.52	135.78
32	E2_Da	NovelBoundary	0	9.71	2.50	22.94	24.84	7.13	20.50	16.83	14.05	11.02	46.34	10.00	0.00	12.50	7.95	10.01	11.11	13.18	14.51	9.51	14.25	10.63	0.00	3.41
33	E2a_E3a	KnownJunction	1	129.87	468.27	502.85	474.80	276.66	508.51	243.95	336.31	329.74	373.89	276.75	112.84	67.53	360.88	252.67	146.80	223.09	414.04	190.31	332.56	415.14	207.34	187.20
34	E2a_E4a	KnownJunction	0	0.00	0.00	15.76	19.01	3.40	5.62	0.00	5.50	0.00	10.23	6.95	0.00	0.00	9.89	8.90	0.00	0.00	1.82	0.00	12.66	0.00	0.00	0.00
35	ER3a	ExonRegion	0	135.28	283.00	355.02	409.23	245.80	351.03	184.68	269.96	259.00	312.86	234.06	125.32	124.24	375.01	344.10	267.03	212.54	402.60	243.02	245.53	344.39	243.67	277.54
36	E3_Da	KnownBoundary	0	84.24	192.73	217.20	132.98	143.55	99.43	54.98	195.64	157.93	265.48	90.97	102.63	55.03	143.33	150.57	146.12	78.63	250.01	101.37	148.48	97.42	73.17	89.97
37	E3a_E4a	KnownJunction	1	241.01	218.25	369.03	599.62	364.09	346.51	184.16	339.07	227.95	277.51	336.24	147.20	96.10	414.27	499.91	336.15	247.31	294.19	437.85	207.35	402.85	457.11	391.22
38	ER3b	ExonRegion	0	112.66	191.86	208.51	122.52	233.74	162.05	126.81	191.94	142.98	216.04	78.72	89.63	76.67	126.82	131.31	101.74	83.27	163.94	88.83	140.71	77.68	71.86	70.14
39	E3_Db	NovelBoundary	0	58.53	61.50	85.77	59.60	130.39	74.73	55.87	111.39	68.55	80.83	31.64	38.26	41.07	36.02	26.82	49.47	9.16	31.34	12.80	71.84	2.78	46.11	11.18
40	E3_Dc	NovelBoundary	0	45.86	32.63	90.59	56.17	105.18	24.08	60.59	64.28	62.30	58.34	29.48	38.11	16.07	35.43	28.80	57.76	38.43	62.88	69.74	72.99	32.12	48.37	44.99
41	ER3c	ExonRegion	0	12.40	11.62	24.86	11.49	32.49	1.83	3.97	15.56	18.00	9.18	0.55	6.18	7.37	9.51	8.29	10.61	0.47	13.99	2.73	12.46	1.26	2.08	5.03
42	I3	Intron	0	42.29	50.70	107.04	55.27	99.80	44.67	87.42	71.08	64.81	78.37	47.45	52.10	37.49	72.39	44.72	48.64	41.46	77.30	60.01	75.31	46.13	39.25	35.77
43	I3_SR1	SilentIntronRegion	0	25.24	24.65	110.69	46.89	75.75	33.37	75.88	70.61	57.25	67.68	40.45	57.30	63.18	62.33	44.31	31.60	41.14	52.50	50.97	74.35	39.35	35.01	35.21
44	I3_AR1	ActiveIntronRegion	1	28.93	62.93	144.08	62.92	106.88	45.18	83.34	94.73	92.50	100.58	52.73	58.57	25.66	86.71	46.66	67.37	29.52	71.86	42.74	83.51	55.89	30.56	41.44
45	I3_AR2	ActiveIntronRegion	1	61.62	70.27	94.66	61.02	119.80	54.67	99.93	65.55	64.00	82.07	52.60	46.57	19.60	77.98	45.26	58.40	45.84	101.28	73.86	74.81	49.70	46.14	35.12
46	E4_Aa	NovelBoundary	1	72.90	96.04	168.00	87.30	146.01	82.17	152.27	118.25	72.63	98.21	54.96	18.91	48.54	141.97	51.18	77.16	90.42	140.44	153.32	82.52	55.11	54.31	71.19
47	ER4a	ExonRegion	0	213.60	384.49	468.02	672.89	458.43	328.35	269.70	354.46	277.60	280.44	322.39	289.63	290.28	369.61	328.20	286.72	247.23	269.29	325.68	255.91	315.46	351.49	300.55
48	E4_Da	KnownBoundary	0	140.54	298.43	250.49	382.27	124.36	64.96	89.96	178.01	165.83	141.97	174.89	251.48	206.48	322.09	220.78	216.10	129.59	86.14	294.13	156.15	96.43	362.93	242.69
49	ER4b	ExonRegion	0	46.23	48.66	25.26	33.43	34.95	30.33	35.32	14.29	11.86	11.74	7.25	29.59	28.19	14.92	17.50	12.15	5.64	8.45	13.32	12.67	5.16	16.45	13.76
50	IG49	Intergenic	0	64.10	58.30	91.65	74.98	198.68	72.44	108.56	84.80	81.01	67.87	47.48	74.76	45.37	72.54	58.38	48.16	38.79	54.73	53.56	57.43	27.45	43.47	46.11
51	IG49_AR2	ActiveIntergenicRegion	0	61.83	53.82	110.87	89.50	249.01	91.14	119.58	119.87	87.73	79.37	50.11	104.39	63.18	85.30	58.53	47.47	40.87	58.47	59.60	54.70	26.43	40.15	51.15
52	IG49_SR1	SilentIntergenicRegion	0	83.65	63.59	93.60	89.34	221.78	85.37	132.75	80.65	87.64	64.65	50.06	90.22	52.13	94.85	84.34	61.24	56.08	70.27	60.54	63.26	27.40	51.46	56.26
53	IG49_AR1	ActiveIntergenicRegion	0	58.20	66.86	86.40	59.90	161.54	54.37	92.94	69.25	81.44	70.89	50.18	44.40	29.55	51.31	43.31	44.29	26.87	45.45	49.91	63.73	32.84	46.09	39.25