Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IGFBP3 Gene 0 191.80 57.69 294.45 257.60 283.54 32.33 50.32 262.14 61.47 164.04 0.00 0.08 0.18 0.03 0.28 0.00 0.83 10.01 0.00 4.91 393.19 1950.01 1503.63 2 448817 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 1.68 5.00 3 275521 Transcript 0 17.84 3.05 4.55 5.06 27.71 2.75 6.53 9.51 1.32 3.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 3.46 41.97 43.84 4 433047 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 381086 Transcript 0 0.00 0.00 3.46 0.00 0.00 4.43 0.00 7.97 2.26 7.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 13.71 4.78 13.15 6 438491 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 7 442142 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 381083 Transcript 0 0.06 0.11 0.07 0.38 0.00 0.20 0.00 0.14 0.07 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.00 1.71 9.60 3.75 9 460477 Transcript 0 2.98 0.96 10.10 5.26 12.74 4.48 1.99 6.20 3.05 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.50 8.26 27.36 52.07 10 465642 Transcript 0 1.53 0.00 7.71 0.54 2.11 0.37 1.39 5.07 1.58 1.92 0.00 0.00 0.00 0.00 0.00 0.00 0.43 0.67 0.00 0.14 4.37 12.47 29.24 11 417621 Transcript 0 5.64 0.32 2.74 4.01 10.41 1.76 3.29 4.59 1.84 6.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.55 0.00 0.42 5.22 14.51 26.72 12 428530 Transcript 0 7.44 1.04 2.06 3.27 13.16 0.45 3.07 4.33 0.91 4.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.19 0.00 0.15 0.30 14.52 6.20 13 460209 Transcript 0 9.37 0.38 6.06 4.76 10.65 1.60 2.35 8.01 2.81 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.06 0.00 0.03 6.87 24.54 41.25 14 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.91 0.24 1.73 15 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 8.28 16 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER2c ExonRegion 0 0.67 1.07 8.64 1.51 1.97 5.31 0.14 5.09 1.43 3.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.00 37.46 90.25 156.57 19 ER2d ExonRegion 0 3.52 3.35 32.76 10.20 3.13 12.96 5.08 35.16 5.42 28.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.96 0.00 0.91 159.46 380.25 558.97 20 E2_Da KnownBoundary 0 0.00 0.00 6.45 1.66 0.00 4.77 0.00 29.29 4.83 16.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 3.20 86.24 11.08 52.58 21 E2a_E2e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E2a_E2g KnownJunction 0 0.00 0.00 3.46 0.00 0.00 4.43 0.00 7.97 2.26 7.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 13.71 4.78 13.15 23 ER2e ExonRegion 0 0.43 1.12 15.27 2.51 0.00 0.45 0.76 18.00 5.80 14.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 1.55 200.09 211.11 226.09 24 E2_Ae KnownBoundary 0 3.56 0.00 38.59 22.91 0.00 2.33 0.00 37.21 8.62 29.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.01 0.00 0.00 183.17 897.74 687.69 25 E2_Db KnownBoundary 0 6.89 8.95 52.25 10.65 0.00 4.77 0.00 46.21 34.23 34.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.13 0.00 3.26 202.82 673.75 1200.46 26 E2b_E2g KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 27 ER2f ExonRegion 0 4.08 3.09 36.90 7.27 0.00 2.31 0.25 31.43 17.79 28.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.93 0.00 4.02 201.60 811.80 932.33 28 ER2g ExonRegion 0 4.46 3.18 57.28 25.77 21.87 9.61 7.11 55.68 20.23 52.53 0.00 0.00 0.00 0.00 0.70 0.00 0.00 7.55 0.00 3.47 290.52 442.56 749.24 29 E2_Af KnownBoundary 0 3.26 6.18 117.59 101.89 32.68 30.10 7.86 121.83 47.05 106.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.45 0.00 6.01 392.04 1352.71 1442.98 30 E2_Ag KnownBoundary 0 10.82 3.22 23.89 26.30 8.32 0.00 0.00 49.78 15.22 23.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.44 0.00 3.26 72.16 606.33 472.74 31 E2_Dc KnownBoundary 0 13.48 2.70 101.18 42.32 3.31 2.38 0.00 82.23 15.31 71.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 0.00 3.26 121.39 326.86 383.88 32 E2c_E2h KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER2h ExonRegion 0 9.80 5.42 118.27 51.89 14.07 12.50 4.76 99.80 37.05 102.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.99 0.00 9.61 307.21 1379.91 1193.80 34 ER2i ExonRegion 0 16.93 4.75 144.59 54.06 13.38 7.95 3.97 101.40 32.94 121.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.39 0.00 12.06 260.04 1283.45 939.73 35 ER2j ExonRegion 0 21.99 7.49 128.02 42.14 21.91 19.87 11.95 101.96 32.52 109.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.80 0.00 5.41 410.75 820.96 884.65 36 E2d_E4a KnownJunction 0 30.82 18.75 166.61 141.14 58.06 9.03 14.04 191.86 61.75 177.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.82 0.00 0.00 538.95 1122.04 1487.88 37 ER2k ExonRegion 0 28.27 13.22 128.14 88.10 39.56 11.66 14.28 136.79 46.58 121.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.11 0.00 0.00 484.50 954.70 1175.71 38 E2e_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.37 0.00 39 ER2l ExonRegion 0 0.12 0.23 0.14 0.76 0.00 0.41 0.00 0.29 0.14 0.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.21 0.00 0.00 3.43 9.84 7.50 40 ER3a ExonRegion 0 3.07 0.00 15.42 1.08 4.22 0.74 2.78 10.14 3.17 3.83 0.00 0.00 0.00 0.00 0.00 0.00 0.87 1.33 0.00 0.28 8.75 21.83 58.48 41 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 42 E4_Ab NovelBoundary 0 42.01 8.62 54.17 27.57 51.02 17.43 17.58 65.35 19.36 39.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.64 0.00 2.75 315.25 619.19 857.90 43 ER4a ExonRegion 0 35.07 13.36 161.49 123.54 55.43 14.15 19.29 176.06 59.20 137.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.27 0.00 1.98 581.46 1155.91 1497.27 44 E4_Ac KnownBoundary 0 73.79 22.23 400.90 268.73 68.76 17.72 18.28 398.99 100.75 241.06 0.00 0.00 0.00 0.00 4.45 0.00 0.00 36.23 0.00 6.01 658.67 1732.48 2231.73 45 ER4b ExonRegion 0 51.60 17.60 297.55 194.05 70.03 17.52 21.14 312.85 86.33 212.02 0.00 0.00 0.00 0.00 1.20 0.00 0.00 33.64 0.00 4.84 674.72 1554.95 2003.90 46 ER4c ExonRegion 0 151.55 48.99 355.62 276.47 220.59 44.02 41.18 374.67 107.58 267.33 0.00 0.00 2.14 0.00 0.95 0.00 0.91 22.01 0.00 9.76 974.51 2794.41 3013.31 47 E4_Da KnownBoundary 0 0.00 0.00 11.56 0.00 3.31 2.90 3.49 4.56 4.60 9.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.81 34.11 44.05 48 E4a_E5a KnownJunction 0 245.82 60.19 477.42 456.19 297.71 53.83 53.70 450.62 113.83 306.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.02 0.00 6.14 1011.54 3297.00 3204.28 49 ER4d ExonRegion 0 2.98 0.96 10.10 5.26 12.74 4.48 1.99 6.20 3.05 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.50 8.26 27.36 52.07 50 ER5a ExonRegion 0 258.71 77.80 400.25 387.26 290.01 55.48 51.86 440.09 121.72 314.67 0.00 0.00 0.00 0.00 0.00 0.00 2.53 23.90 0.00 9.51 1003.81 3253.26 3404.26 51 E5_Da KnownBoundary 0 435.04 116.69 402.14 428.35 384.04 61.56 82.58 497.49 147.63 336.28 0.00 0.00 0.00 0.00 0.00 0.00 4.30 32.17 0.00 6.07 1153.14 3571.63 3946.00 52 ER5b ExonRegion 0 261.45 92.51 390.39 427.72 369.36 60.85 70.95 513.67 153.53 348.45 0.00 0.00 0.00 0.00 0.00 0.00 1.01 36.54 0.00 11.25 1096.46 3812.25 3637.54 53 E5_Db NovelBoundary 0 298.65 91.23 321.99 354.13 414.26 72.12 92.48 427.17 116.52 287.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.66 0.00 13.68 880.64 4375.50 3505.35 54 E5c_E6b KnownJunction 0 519.80 175.69 552.79 490.78 594.65 84.61 141.98 586.70 155.12 365.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.55 0.00 14.00 1196.75 4873.02 4135.16 55 ER5c ExonRegion 0 357.16 130.15 476.06 445.49 460.12 79.01 113.64 533.30 148.27 353.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.80 0.00 10.64 1162.27 4836.54 3993.59 56 ER6a ExonRegion 0 9.37 0.38 6.06 4.76 10.65 1.60 2.35 8.01 2.81 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.06 0.00 0.03 6.87 24.54 41.25 57 E6_Ab KnownBoundary 0 3.04 0.00 2.39 3.93 12.99 3.97 4.02 9.16 3.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.28 0.00 0.00 0.00 10.35 27.83 58 ER6b ExonRegion 0 324.34 141.60 520.46 465.13 433.92 52.73 91.65 487.58 136.09 306.46 0.00 0.00 0.00 0.00 0.84 0.00 1.51 26.68 0.00 16.83 1045.18 4303.20 3167.35 59 E6_Da KnownBoundary 0 155.73 72.95 294.64 287.21 297.45 19.59 70.35 297.05 84.61 180.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.35 0.00 6.97 678.87 2850.54 1579.64 60 E6_Db KnownBoundary 0 3.78 0.00 0.00 3.66 7.89 0.00 0.00 2.22 2.78 4.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.67 9.00 4.35 61 E6b_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 E6b_E7a KnownJunction 0 468.68 126.29 610.74 570.26 641.68 78.65 115.40 596.72 166.49 372.09 0.00 0.00 0.00 0.00 0.00 0.00 8.60 15.50 0.00 11.44 1309.87 4626.01 3126.59 63 ER6c ExonRegion 0 328.06 117.00 502.97 470.56 533.19 57.83 92.59 510.24 142.53 324.19 0.00 0.00 0.00 0.00 0.00 0.00 5.50 14.41 0.00 9.93 1254.79 4569.02 2814.87 64 ER6d ExonRegion 0 5.64 0.32 2.74 4.01 10.41 1.76 3.29 4.59 1.84 6.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.55 0.00 0.42 5.22 14.51 26.72 65 E6_Ac KnownBoundary 0 7.56 2.96 3.08 7.96 29.71 0.00 4.02 8.79 1.79 8.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.31 17.21 37.82 66 ER6e ExonRegion 0 8.52 2.42 3.68 5.77 23.05 4.11 3.48 7.93 1.69 7.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.98 0.00 0.00 1.61 21.45 30.01 67 E6_Dc KnownBoundary 0 13.56 3.35 3.13 5.69 3.23 5.11 2.21 9.00 3.59 5.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.35 24.93 68 ER6f ExonRegion 0 14.88 2.09 4.12 6.55 26.32 0.91 6.15 8.67 1.81 8.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.38 0.00 0.29 0.61 29.05 12.41 69 ER7a ExonRegion 0 380.83 132.72 597.90 568.10 630.32 77.45 89.68 599.89 152.58 378.98 0.00 0.00 0.00 0.00 0.00 0.00 6.60 14.04 0.00 18.01 1273.89 5129.69 3800.99 70 ER7b ExonRegion 0 360.20 119.66 689.69 673.65 630.97 88.88 101.41 705.59 175.81 404.28 0.00 0.00 0.00 0.00 0.00 0.00 1.13 12.18 0.00 28.66 1015.84 6575.00 4764.43 71 E7_Db KnownBoundary 0 534.54 113.07 822.47 806.29 782.43 119.48 136.60 840.79 207.90 428.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.73 0.00 25.89 920.05 8024.77 5310.52 72 ER7c ExonRegion 0 449.50 152.07 624.80 620.14 869.20 131.54 158.20 722.44 165.39 442.75 0.00 0.00 0.00 0.00 0.00 0.00 3.98 20.89 0.00 14.51 850.18 6500.24 4946.90 73 E7_Dc KnownBoundary 0 495.35 170.10 773.78 740.27 569.61 71.72 113.14 866.83 174.71 526.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.11 0.00 11.57 856.54 9004.81 5592.99 74 ER7d ExonRegion 0 505.21 144.85 740.06 652.73 729.04 70.14 124.08 612.33 132.59 368.83 0.00 0.28 0.31 0.11 0.64 0.00 1.57 17.86 0.00 8.60 733.78 4319.15 3025.52 75 ER7e ExonRegion 0 35.68 6.10 9.10 10.12 55.43 5.50 13.05 19.01 2.65 5.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.30 6.93 83.94 87.68