Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	HERPUD2	Gene	0	89.00	64.46	69.83	82.73	130.69	97.36	79.48	81.60	67.60	72.26	100.23	91.51	159.72	173.74	153.33	118.51	80.80	45.70	39.54	41.42	106.98	123.43	77.74
2	311350	Transcript	0	0.00	0.00	0.00	1.47	13.84	10.11	14.88	1.64	7.44	10.23	20.27	0.00	12.66	37.32	13.35	3.42	21.88	2.45	4.05	3.07	20.63	0.00	4.35
3	396081	Transcript	0	67.90	36.72	51.04	64.39	83.43	47.04	44.35	70.44	40.46	51.75	38.07	42.85	74.74	71.43	112.03	42.66	30.37	17.72	17.66	20.53	41.09	91.01	31.26
4	427455	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	438224	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	413517	Transcript	0	0.00	0.00	0.00	1.50	0.00	4.88	0.00	1.56	2.23	1.64	7.26	0.00	7.79	5.42	0.00	0.00	17.86	0.00	0.00	0.00	0.00	2.82	0.00
7	426180	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.11	0.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1a	ExonRegion	0	8.60	0.27	4.14	3.68	1.21	11.59	9.53	6.32	3.38	7.75	7.44	2.15	3.49	13.38	11.94	2.87	9.76	2.08	2.96	5.80	6.07	7.32	2.18
9	E1_Ab	KnownBoundary	0	0.00	2.96	1.18	0.00	0.00	20.50	4.11	5.75	2.34	7.33	8.05	21.61	0.00	7.36	4.45	0.00	4.58	8.04	0.00	2.56	13.28	11.08	8.11
10	ER1b	ExonRegion	0	2.40	0.50	2.29	1.95	3.03	10.58	5.39	3.52	4.55	11.21	25.43	2.59	6.08	35.72	27.77	14.45	20.24	6.26	7.79	9.33	34.23	17.15	12.30
11	E1_Da	KnownBoundary	0	0.00	3.29	7.95	0.00	0.00	15.67	10.07	2.05	8.07	19.58	27.27	0.00	26.78	41.85	19.66	18.54	12.62	29.31	13.18	11.70	36.26	5.27	11.87
12	E1a_E1c	KnownJunction	0	0.00	0.00	0.00	1.47	13.84	10.11	14.88	1.64	7.44	10.23	20.27	0.00	12.66	37.32	13.35	3.42	21.88	2.45	4.05	3.07	20.63	0.00	4.35
13	E1a_E1e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER1c	ExonRegion	0	7.10	5.24	9.99	3.79	3.68	18.29	9.40	16.91	19.34	23.64	31.89	9.60	21.91	47.51	40.88	35.97	26.27	25.18	11.44	15.79	60.65	36.59	35.16
15	E1_Ac	KnownBoundary	0	17.26	15.66	11.95	9.72	24.36	34.75	25.22	19.26	22.89	14.13	26.01	0.00	52.76	57.04	44.38	36.91	35.72	15.09	22.21	18.98	53.38	30.80	47.38
16	E1_Ad	KnownBoundary	0	6.45	0.00	1.71	7.76	3.90	20.33	18.20	0.00	4.95	8.65	15.11	6.30	8.28	22.49	4.45	12.30	13.65	2.57	0.00	5.88	32.62	15.49	12.46
17	E1_Ae	KnownBoundary	0	6.89	0.00	11.47	7.82	0.00	12.78	12.32	11.38	10.97	9.13	14.27	0.00	19.32	26.78	15.70	0.00	20.29	21.14	4.80	5.82	27.43	8.27	16.99
18	ER1d	ExonRegion	1	13.59	7.35	17.72	15.88	18.22	52.47	41.40	17.02	24.23	26.78	44.46	4.66	38.24	104.82	64.27	37.72	46.72	19.69	17.89	19.72	85.61	35.18	46.08
19	ER1e	ExonRegion	1	12.17	0.51	19.61	16.35	13.38	47.22	40.38	15.12	24.08	27.53	52.67	4.33	28.14	102.32	64.55	34.92	37.14	20.33	8.76	13.30	93.11	31.25	40.38
20	E1_Af	KnownBoundary	1	10.59	9.74	15.23	10.72	7.72	29.41	28.04	30.23	34.20	34.01	93.08	18.31	13.64	80.41	97.78	40.59	53.20	49.37	9.04	8.82	125.47	34.35	32.69
21	ER1f	ExonRegion	1	11.67	4.92	20.63	16.49	8.72	39.81	31.31	17.06	23.99	31.45	73.14	8.52	27.08	97.45	82.08	33.65	49.30	29.80	6.88	11.32	106.99	34.01	30.41
22	ER1g	ExonRegion	0	31.59	26.26	65.34	62.44	53.27	75.11	52.56	79.26	86.62	92.13	125.56	73.17	142.71	217.92	142.77	163.99	115.25	72.30	45.84	59.49	160.90	129.71	109.98
23	E1b_E2a	KnownJunction	1	38.15	19.47	84.24	98.92	77.33	132.25	70.70	94.80	134.58	118.19	176.52	111.64	312.15	243.34	100.75	154.06	191.02	59.90	25.69	74.21	229.38	167.11	126.25
24	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	1.50	0.00	4.88	0.00	1.56	2.23	1.64	7.26	0.00	7.79	5.42	0.00	0.00	17.86	0.00	0.00	0.00	0.00	2.82	0.00
25	E1b_E5a	KnownJunction	0	0.00	9.27	9.61	6.03	3.74	27.65	22.04	15.36	8.33	19.50	7.16	0.00	14.12	16.78	10.75	11.79	12.81	0.00	0.00	0.00	10.81	8.63	8.71
26	I1_AR2	ActiveIntronRegion	0	23.23	2.89	2.87	1.43	34.22	9.65	27.04	10.73	6.40	2.72	16.23	5.13	8.89	1.45	2.75	1.56	2.52	0.88	4.95	7.39	6.61	3.56	7.34
27	ER2a	ExonRegion	1	47.02	36.14	83.50	95.30	71.59	94.75	58.08	104.44	98.90	94.58	167.39	135.60	381.82	262.67	110.10	179.05	117.90	82.01	32.92	75.07	170.00	137.83	99.73
28	E2a_E3a	KnownJunction	0	94.54	50.45	141.48	144.77	95.08	106.08	91.59	134.52	130.81	106.00	176.89	216.07	495.10	316.79	162.31	239.08	115.47	129.04	44.05	76.96	161.98	184.62	94.16
29	ER3a	ExonRegion	0	74.69	63.77	115.11	126.70	136.74	129.99	111.53	114.38	132.45	122.61	221.08	211.38	399.15	331.51	235.36	330.11	187.34	122.53	78.10	105.51	224.33	255.56	197.84
30	E3a_E5a	KnownJunction	0	63.20	55.32	89.09	108.01	239.90	151.73	185.70	105.93	89.76	111.64	186.31	216.97	348.35	265.00	205.95	264.63	127.63	67.53	52.52	70.31	178.23	189.82	144.18
31	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.22	0.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER5a	ExonRegion	0	36.71	54.85	93.90	100.89	232.71	173.84	144.61	111.91	110.63	117.12	185.28	213.88	386.19	309.37	214.78	219.94	198.90	79.82	56.61	58.66	185.17	185.43	118.81
34	E5_Da	KnownBoundary	0	34.23	63.28	114.66	106.98	284.64	192.45	144.77	121.21	129.17	118.00	189.26	237.08	477.24	299.08	241.67	158.51	209.91	90.95	53.65	66.03	181.50	180.82	86.39
35	ER5b	ExonRegion	0	35.82	53.35	116.19	142.65	196.96	177.76	110.32	115.26	123.57	142.27	216.65	234.87	581.92	354.76	236.09	289.93	150.85	149.05	87.09	92.06	217.47	212.83	167.49
36	E5b_E6a	KnownJunction	0	54.68	59.53	125.84	159.55	159.17	147.98	82.05	130.41	138.22	162.11	267.23	279.39	417.67	324.86	280.86	352.56	176.25	168.88	120.57	88.91	250.69	233.73	251.99
37	ER6a	ExonRegion	0	53.00	48.48	124.82	127.59	116.06	99.87	99.44	127.69	115.71	143.61	242.16	161.25	301.80	303.86	226.53	252.61	174.17	107.94	101.54	65.56	259.98	231.97	145.66
38	E6_Da	NovelBoundary	0	13.48	9.67	5.41	28.63	24.28	39.01	23.85	24.69	14.70	14.56	11.58	13.50	39.12	45.56	23.12	11.79	9.44	7.38	4.14	8.25	0.00	8.02	12.80
39	E6a_E7a	KnownJunction	0	74.98	68.94	131.22	119.00	221.22	89.10	132.40	107.29	116.52	146.48	232.43	185.76	463.44	258.70	219.42	230.71	95.47	154.83	89.04	63.79	289.92	184.56	158.01
40	E6a_E8a	NovelJunction	0	0.00	3.16	1.60	1.76	0.00	30.89	4.11	7.02	5.73	3.33	0.00	0.00	0.00	8.30	8.90	12.30	17.30	1.74	4.80	0.00	0.00	2.82	0.00
41	I6	Intron	0	39.49	26.73	14.14	35.80	50.86	54.58	40.83	28.72	23.41	26.76	17.92	26.60	31.15	33.62	24.90	20.72	14.41	8.03	8.67	12.63	7.75	20.97	11.23
42	I6_SR1	SilentIntronRegion	0	25.13	16.91	7.74	25.67	40.55	38.17	34.44	19.49	14.78	26.37	16.03	21.14	28.29	26.26	14.82	15.18	11.50	5.03	5.71	13.45	7.40	14.15	9.91
43	I6_AR1	ActiveIntronRegion	0	44.42	27.38	22.16	62.63	57.88	59.90	50.75	35.21	34.29	35.15	19.78	30.75	34.85	34.40	34.57	24.14	19.88	7.01	10.64	15.79	5.54	28.74	13.82
44	I6_SR2	SilentIntronRegion	0	18.09	12.80	13.69	8.87	29.17	35.31	22.28	17.50	15.76	11.71	5.39	6.89	36.66	24.36	25.13	15.11	8.41	2.84	0.31	8.60	1.15	13.76	2.61
45	I6_AR2	ActiveIntronRegion	0	40.20	27.08	11.67	24.22	50.48	55.10	35.84	28.61	21.01	22.13	16.63	29.87	30.02	34.06	22.18	20.30	10.77	9.69	9.44	11.16	8.22	18.02	8.82
46	I6_SR3	SilentIntronRegion	0	78.74	68.02	20.59	44.48	72.97	85.51	61.26	41.60	31.20	35.02	28.40	31.52	34.66	46.94	38.36	24.07	30.42	12.99	7.72	13.42	16.99	29.62	16.44
47	I6_AR3	ActiveIntronRegion	0	32.20	17.05	10.05	29.20	46.68	62.44	37.05	26.07	17.19	18.05	18.90	14.82	25.60	43.84	19.96	27.56	7.43	10.53	12.03	6.34	8.68	23.32	17.53
48	E7_Aa	NovelBoundary	0	202.63	106.76	22.21	33.20	129.37	147.87	83.91	40.99	17.65	33.50	20.37	18.46	37.01	45.15	76.40	23.24	9.07	6.80	4.80	17.96	15.51	21.92	15.37
49	ER7a	ExonRegion	0	125.00	99.95	110.77	123.57	267.09	130.26	140.54	118.84	101.80	127.48	247.53	172.65	537.36	348.00	274.92	265.15	127.13	125.42	122.97	63.12	309.39	182.40	177.18
50	E7_Da	KnownBoundary	0	250.56	157.93	145.32	167.05	373.94	213.63	200.15	159.29	126.13	148.92	245.43	194.16	565.87	419.27	379.51	288.30	156.52	118.72	121.89	68.52	296.78	177.52	188.14
51	ER7b	ExonRegion	0	131.07	108.87	126.72	126.81	191.35	144.67	112.02	166.29	110.38	127.74	161.99	141.34	280.54	276.52	228.74	153.90	123.46	45.86	47.04	58.23	216.93	224.82	127.39
52	E7_Db	KnownBoundary	0	99.80	104.52	103.10	79.11	165.53	180.18	113.19	100.30	77.14	83.11	176.89	92.58	334.72	240.98	219.05	179.61	110.52	25.37	34.54	69.86	203.68	132.02	105.00
53	ER7c	ExonRegion	0	64.02	53.28	84.64	96.22	152.99	112.64	99.63	73.75	78.06	71.52	110.17	100.61	188.34	207.11	171.45	129.95	84.45	42.44	36.64	49.72	114.02	117.71	88.25
54	E7_Dc	NovelBoundary	0	21.78	28.09	8.04	32.40	26.57	45.94	19.92	24.52	28.93	22.46	4.84	24.46	13.15	17.54	34.86	15.89	27.30	6.09	4.80	15.79	11.00	18.00	10.93
55	E7c_E8a	KnownJunction	0	97.05	53.94	58.22	104.25	216.89	104.49	117.74	62.88	53.04	57.27	140.19	102.93	144.47	149.21	181.47	138.94	88.64	43.73	24.75	29.47	106.75	117.69	78.96
56	I7	Intron	0	25.57	15.45	7.40	32.47	51.49	68.71	31.22	27.76	21.97	19.78	9.37	19.45	24.79	22.21	10.37	6.88	7.16	2.20	5.76	8.62	3.50	15.98	9.13
57	I7_AR1	ActiveIntronRegion	0	18.95	8.51	3.63	20.67	21.41	36.53	17.40	10.19	14.20	6.27	10.29	15.56	23.89	15.49	12.28	6.12	12.70	1.65	9.22	7.20	7.25	9.55	5.22
58	I7_SR1	SilentIntronRegion	0	25.08	15.54	8.40	34.37	50.73	68.37	34.29	28.97	26.37	21.18	9.30	22.18	23.60	22.53	11.74	6.38	8.11	3.03	6.40	11.00	3.35	16.70	9.25
59	I7_AR2	ActiveIntronRegion	0	29.03	17.99	7.20	33.96	64.28	81.75	31.54	32.50	17.76	22.63	9.22	16.56	27.29	24.37	7.50	8.05	3.60	1.06	3.47	5.30	2.40	17.29	10.47
60	E8_Aa	NovelBoundary	0	58.45	15.19	2.84	26.54	77.08	126.97	67.88	35.04	28.93	20.76	11.16	6.30	55.84	18.95	16.56	0.00	13.37	0.00	0.00	2.62	2.84	25.60	3.84
61	ER8a	ExonRegion	0	160.78	105.63	81.95	113.62	276.94	187.61	129.86	96.38	81.06	77.15	153.08	151.13	197.22	231.37	200.78	196.44	125.80	61.74	52.50	45.92	123.15	140.36	120.43
62	E8a_E9a	KnownJunction	0	253.60	175.10	75.31	127.76	314.43	198.98	163.71	119.77	101.01	83.33	137.03	118.09	226.93	271.35	238.83	202.25	114.45	48.79	46.78	46.98	156.42	132.75	171.07
63	ER9a	ExonRegion	0	173.08	127.51	71.28	92.13	202.36	138.03	114.25	85.46	64.55	60.61	83.37	95.47	103.08	175.67	177.74	95.74	70.13	30.22	40.99	34.42	84.55	119.48	69.55
64	E9_Da	KnownBoundary	1	243.15	116.89	55.20	80.48	127.16	123.00	141.50	95.33	64.38	70.92	83.07	51.02	25.97	122.02	263.30	67.93	64.24	17.66	64.19	30.62	70.12	167.66	48.06
65	ER9b	ExonRegion	1	128.70	68.19	92.09	125.00	163.19	75.79	79.31	123.97	61.59	79.86	44.24	76.09	127.57	95.36	183.17	49.34	34.47	10.26	23.88	25.28	21.53	145.42	27.36
66	IG13_SR17	SilentIntergenicRegion	0	0.00	1.37	1.94	4.14	11.76	8.18	16.20	4.84	4.92	2.63	2.87	6.38	7.00	3.81	4.74	1.01	4.49	0.94	3.23	1.45	0.00	2.83	1.00
67	IG13_AR15	ActiveIntergenicRegion	0	5.26	3.82	3.02	3.94	9.32	8.53	18.31	10.20	5.32	3.09	4.37	3.08	4.44	4.10	1.13	3.72	2.31	2.29	0.00	2.71	0.99	3.47	4.15
68	IG13_SR12	SilentIntergenicRegion	0	3.70	0.00	6.13	2.73	13.38	16.50	25.49	7.13	3.09	1.58	3.38	4.33	0.00	4.26	2.90	5.57	3.30	3.70	0.00	6.38	2.20	4.69	5.87
69	IG13_AR14	ActiveIntergenicRegion	0	4.15	2.30	2.98	3.68	14.32	13.63	16.53	10.00	5.27	4.48	3.77	3.66	2.63	6.48	6.43	6.92	2.48	5.45	3.07	3.96	3.29	4.67	3.14