Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PSMA2 Gene 0 106.67 86.92 128.13 78.16 108.44 90.22 86.57 78.11 46.44 71.48 215.04 182.04 70.55 177.35 279.52 171.06 188.74 47.17 67.27 69.15 44.29 83.14 42.99 2 223321 Transcript 0 14.26 3.78 2.11 5.20 6.53 4.06 5.56 3.70 2.56 2.85 9.05 5.05 3.80 8.75 18.73 4.57 5.82 0.79 1.17 2.32 1.84 2.50 0.00 3 445517 Transcript 1 13.04 11.12 10.88 0.00 6.88 16.98 17.05 5.09 3.59 5.00 41.80 0.00 0.00 12.48 4.45 22.22 35.34 2.07 0.00 0.00 5.44 10.16 4.35 4 442788 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 411875 Transcript 0 5.93 4.98 4.27 4.58 9.98 8.86 13.86 6.61 4.28 5.18 5.14 13.24 11.69 8.02 7.45 9.25 7.75 3.43 3.05 6.70 2.66 5.17 3.64 6 433579 Transcript 0 0.28 1.62 0.24 0.27 0.71 0.00 0.25 0.96 2.34 1.02 0.26 2.88 0.72 0.46 0.12 0.16 0.44 0.51 0.00 2.97 0.00 0.06 0.08 7 436986 Transcript 0 6.34 0.55 0.61 3.36 8.64 1.77 4.10 0.64 0.00 3.05 3.83 0.02 0.00 4.95 16.77 7.08 7.49 2.11 3.46 0.00 0.89 3.60 0.00 8 457444 Transcript 0 366.86 394.18 99.66 69.51 247.95 342.61 268.10 78.36 44.46 86.40 510.93 10.10 7.04 378.15 270.78 662.29 486.88 173.07 190.06 143.62 166.38 115.98 190.88 9 ER1a ExonRegion 0 9.17 2.14 0.38 0.66 1.85 6.63 2.17 0.00 0.00 0.79 11.10 0.00 0.00 9.08 27.38 8.15 6.77 0.00 0.82 1.20 3.67 0.53 0.00 10 E1_Ab KnownBoundary 0 6.45 5.59 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 10.16 0.00 0.00 9.01 8.90 0.00 4.77 0.00 0.00 3.26 3.09 0.00 0.00 11 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ae KnownBoundary 0 18.60 0.00 0.00 0.00 0.00 2.78 2.16 0.00 0.00 0.00 18.37 0.00 0.00 0.00 18.67 16.75 9.54 0.00 0.00 3.13 0.00 0.00 0.00 14 E1_Af KnownBoundary 1 802.51 464.13 100.32 88.27 542.45 799.03 806.85 76.52 47.92 89.18 943.08 55.97 46.59 1250.58 1599.98 1136.37 997.75 217.46 289.89 257.97 278.25 234.28 240.21 15 ER1b ExonRegion 1 47.33 9.80 8.91 8.92 26.51 38.84 20.22 1.10 1.12 5.00 60.80 0.00 0.00 43.11 140.58 68.36 51.61 3.70 10.71 9.09 14.22 9.28 6.14 16 ER1c ExonRegion 1 74.08 29.49 17.77 15.67 66.89 74.27 60.24 5.19 3.09 10.90 110.18 0.00 0.00 114.50 230.65 138.20 117.18 22.17 35.04 20.21 26.44 27.09 20.56 17 ER1d ExonRegion 1 86.78 38.64 19.61 16.35 90.98 93.52 76.79 5.19 3.71 13.76 121.77 0.00 4.69 139.67 252.41 160.49 141.94 29.56 47.78 25.53 30.85 27.09 23.49 18 ER1e ExonRegion 1 708.91 607.80 140.27 121.30 486.83 680.99 603.49 125.97 71.42 141.20 1036.03 3.06 4.69 1186.18 1637.33 1235.71 1026.97 304.66 323.22 283.35 310.46 191.56 303.34 19 ER1f ExonRegion 1 2180.54 2265.75 537.87 387.93 1477.09 2074.33 1644.98 444.55 253.16 487.50 3143.54 30.91 21.11 3478.37 4115.19 3996.19 2980.07 999.32 1138.33 857.03 997.18 699.83 1104.75 20 E1a_E2a KnownJunction 0 13.63 0.00 1.83 8.02 20.97 2.90 7.77 1.93 0.00 4.75 4.74 0.00 0.00 7.36 31.40 21.19 16.64 5.14 8.85 0.00 2.66 8.39 0.00 21 E1a_E3b KnownJunction 1 2812.50 2919.41 888.76 625.33 1724.28 2292.66 1828.12 709.23 385.09 733.76 2959.12 369.42 96.10 1097.01 1900.86 4157.63 2908.27 1386.12 1280.41 946.61 1018.89 740.86 1248.86 22 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 7.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E1a_E5a KnownJunction 0 13.04 11.12 10.88 0.00 6.88 16.98 17.05 5.09 3.59 5.00 41.80 0.00 0.00 12.48 4.45 22.22 35.34 2.07 0.00 0.00 5.44 10.16 4.35 24 ER2a ExonRegion 0 1.62 1.66 0.00 2.07 4.95 2.41 2.85 0.00 0.00 2.31 2.45 0.07 0.00 2.90 14.46 0.05 5.83 1.20 1.54 0.00 0.00 2.40 0.00 25 E2a_E3b KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.00 2.07 4.32 0.00 0.00 4.59 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER3a ExonRegion 0 366.86 394.18 99.66 69.51 247.95 342.61 268.10 78.36 44.46 86.40 510.93 10.10 7.04 378.15 270.78 662.29 486.88 173.07 190.06 143.62 166.38 115.98 190.88 27 ER3b ExonRegion 0 520.38 499.30 406.42 241.88 305.70 399.14 320.15 279.60 159.75 311.88 693.22 516.00 299.30 280.14 466.49 743.03 637.59 459.46 239.87 170.27 230.90 155.91 220.36 28 E3a_E4a KnownJunction 1 170.99 136.29 270.95 143.80 91.68 124.64 92.87 124.66 110.65 218.07 746.61 147.50 131.65 364.94 641.20 301.37 636.28 57.54 189.46 158.64 241.67 139.24 75.97 29 E3a_E5a KnownJunction 0 0.00 0.00 1.45 1.40 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 2.75 0.00 0.00 0.00 30 ER4a ExonRegion 1 237.77 267.00 821.74 528.31 257.62 235.90 213.63 503.40 292.83 526.19 2347.69 967.91 339.90 2082.32 2804.99 2366.33 2034.69 695.45 762.28 642.92 629.37 597.50 594.64 31 E4a_E5a KnownJunction 0 585.36 588.84 1118.35 768.80 700.51 427.20 413.76 540.78 351.67 481.34 1446.95 1247.21 315.89 1409.39 2400.03 2114.40 1312.01 950.53 574.23 590.59 371.78 509.16 564.34 32 I4_SR1 SilentIntronRegion 0 4.47 2.41 4.72 2.36 5.93 6.46 11.01 4.84 3.23 3.34 9.58 16.56 15.48 10.16 9.12 14.76 10.79 2.57 3.02 3.67 1.51 4.40 2.79 33 ER5a ExonRegion 0 620.74 810.84 1105.54 644.13 1282.18 1366.90 1171.94 600.24 376.47 576.20 2038.31 1482.51 457.45 1594.78 2150.44 1218.72 1754.79 461.67 531.49 594.84 451.28 609.08 303.41 34 E5a_E6a KnownJunction 0 1355.43 2000.30 1437.74 897.59 547.28 567.46 660.01 739.74 450.23 714.66 2247.83 1982.15 930.46 2069.11 3421.48 1255.14 1933.80 376.77 541.29 810.92 500.33 886.35 354.00 35 ER6a ExonRegion 0 1698.84 1128.44 1330.05 774.95 575.78 455.01 416.51 714.84 430.68 689.07 2253.29 2072.07 683.37 2041.72 3137.07 1389.11 2008.27 358.19 600.01 645.38 374.28 771.87 345.06 36 E6a_E7a KnownJunction 0 1966.87 852.74 1462.43 706.47 602.63 359.22 440.66 760.24 465.50 736.53 2229.72 2270.54 751.74 1797.94 3176.22 1309.83 1824.96 298.67 573.95 701.75 339.59 790.95 333.00 37 I6_SR4 SilentIntronRegion 0 0.99 1.02 7.63 1.74 4.97 3.58 10.22 8.63 1.72 4.37 7.12 27.43 18.76 2.94 2.69 3.21 8.02 0.20 4.12 2.60 1.15 4.32 3.11 38 I6_AR1 ActiveIntronRegion 0 4.43 4.42 4.72 2.29 5.84 2.10 10.36 8.46 4.00 4.80 4.58 20.30 19.21 3.00 2.75 2.87 4.03 0.20 3.82 3.17 1.48 5.62 0.33 39 I6_SR5 SilentIntronRegion 0 5.53 2.63 0.53 2.98 5.87 1.35 12.83 2.74 4.19 3.02 1.36 11.74 19.70 1.57 5.80 3.59 6.06 0.00 2.34 1.56 1.62 2.08 2.15 40 ER7a ExonRegion 0 1487.65 854.93 1266.09 659.67 606.13 457.41 516.52 777.55 462.18 715.51 2276.75 2029.41 544.80 1920.50 2964.18 1381.44 1919.83 278.61 688.43 668.34 363.67 866.07 330.09 41 E7_Da KnownBoundary 1 14.89 3.16 1.83 10.95 10.95 0.00 29.63 12.73 3.99 8.14 6.63 6.15 37.66 12.77 0.00 18.80 8.60 6.18 3.76 6.52 2.72 20.64 3.24 42 E7a_E8a KnownJunction 0 952.61 971.73 1224.29 728.35 781.15 656.21 761.67 818.44 475.92 718.72 2343.17 2129.34 677.39 1690.57 3084.75 1267.02 1873.68 213.03 609.34 640.00 282.26 908.77 334.54 43 E7a_E10a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 3.50 1.32 0.00 6.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.52 0.00 0.00 0.00 44 ER7b ExonRegion 1 11.86 9.96 8.53 9.16 19.96 17.72 20.38 13.21 8.56 10.35 10.27 26.48 23.37 16.03 14.89 18.50 15.50 6.86 6.10 13.40 5.32 10.34 7.29 45 I7 Intron 0 23.58 5.86 8.51 9.03 22.00 4.88 14.68 12.57 2.86 7.58 5.57 11.63 17.35 9.36 7.48 12.52 6.59 1.43 2.12 10.38 1.47 7.46 2.63 46 I7_SR1 SilentIntronRegion 0 23.99 5.97 8.66 9.18 22.39 4.97 14.93 12.79 2.91 7.71 5.67 11.84 17.66 9.52 7.61 12.74 6.70 1.46 2.16 10.56 1.49 7.60 2.68 47 E8_Aa NovelBoundary 0 39.78 12.23 17.44 15.65 72.16 22.77 29.99 23.58 1.79 8.97 11.37 26.56 6.66 7.36 19.66 16.15 16.92 0.00 0.00 18.15 0.00 22.90 8.54 48 ER8a ExonRegion 0 570.51 711.79 1240.22 685.91 1376.63 942.76 1111.58 757.27 464.96 717.71 2330.14 1810.46 833.94 1587.04 2832.37 1078.11 1985.49 198.79 555.52 642.33 323.98 895.77 266.17 49 E8a_E9a KnownJunction 0 747.24 708.03 1389.04 687.06 2185.23 1212.82 1533.82 708.03 453.44 686.22 1989.08 1823.39 957.57 1700.58 3435.08 1079.55 1664.70 149.98 475.97 691.46 276.52 778.40 224.25 50 ER9a ExonRegion 0 355.30 388.24 1345.24 745.72 779.93 444.13 466.59 671.27 403.81 631.74 1581.93 1755.15 590.81 1008.95 2373.54 1014.23 1287.67 152.87 464.67 469.59 173.02 906.80 193.93 51 E9_Da KnownBoundary 1 358.80 346.06 943.79 402.55 440.32 226.01 297.79 503.61 272.13 459.96 918.39 1640.48 793.13 563.66 1617.16 363.41 593.27 48.09 154.08 301.43 60.11 633.77 77.85 52 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER9b ExonRegion 1 1570.56 581.72 898.40 592.27 1062.99 584.09 623.17 359.55 191.53 282.88 422.39 1344.84 541.30 390.71 1197.96 601.58 363.43 82.98 255.90 190.20 34.30 362.02 94.12 54 E9_Db KnownBoundary 1 63.86 120.37 67.74 80.18 209.76 101.31 125.20 105.89 43.20 71.64 55.38 175.26 48.70 55.62 51.42 62.55 73.12 5.93 29.93 27.55 7.66 55.54 45.24 55 ER9c ExonRegion 1 74.12 88.52 79.88 75.76 180.20 112.23 96.45 108.49 47.16 60.81 75.88 169.81 49.88 71.26 80.29 43.52 62.75 15.99 43.25 53.09 17.57 45.92 22.00 56 E9_Dc KnownBoundary 1 40.82 81.30 93.11 81.97 129.71 84.72 80.38 108.02 69.27 72.31 98.97 181.26 58.76 95.06 102.11 46.91 88.17 25.70 56.28 68.65 22.49 38.27 27.57 57 ER9d ExonRegion 0 32.07 51.19 77.02 55.34 79.51 60.85 48.30 84.21 43.50 49.27 67.03 103.29 31.14 44.65 64.94 42.23 49.72 16.55 26.94 43.53 13.21 40.20 14.48 58 E9_Dd NovelBoundary 0 74.46 18.42 16.35 20.21 37.35 18.17 17.18 14.46 9.49 8.81 32.75 24.91 13.47 19.37 18.54 11.36 13.28 1.99 3.86 12.14 0.00 11.08 3.67 59 ER9e ExonRegion 0 19.35 5.42 3.85 9.73 11.21 1.48 8.95 7.41 5.12 4.92 7.00 10.10 7.59 8.43 10.09 0.99 4.87 1.58 1.52 3.44 0.00 4.46 0.00 60 ER10a ExonRegion 0 0.85 1.51 0.73 0.81 2.14 0.00 0.74 2.88 3.51 1.74 0.77 2.63 2.16 1.37 0.35 0.48 1.32 1.54 0.00 2.38 0.00 0.17 0.23 61 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER11a ExonRegion 0 0.01 0.00 0.00 0.01 0.01 0.03 0.33 0.01 1.55 0.48 1.10 0.12 0.00 0.02 0.03 0.05 0.00 0.77 0.00 0.59 0.00 0.05 0.00 63 E11_Da KnownBoundary 0 3.48 12.76 2.87 4.13 14.43 5.17 10.64 2.55 2.72 6.10 0.00 14.70 0.00 7.00 0.00 0.00 0.00 2.28 4.80 0.00 7.29 0.00 11.27 64 ER11b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 IG26_SR6 SilentIntergenicRegion 0 6.25 3.02 7.26 15.75 37.84 18.31 9.98 10.11 10.52 17.87 4.25 28.95 16.83 4.82 8.02 0.68 3.85 1.67 2.90 12.64 1.51 10.97 6.24 66 IG26_AR7 ActiveIntergenicRegion 0 7.75 6.69 8.09 11.01 22.53 20.56 9.45 4.69 10.90 12.60 2.67 21.63 8.44 4.36 5.64 4.52 2.01 1.90 0.81 6.07 0.84 9.92 7.28 67 IG26_SR5 SilentIntergenicRegion 0 3.37 6.07 4.04 8.40 21.13 9.67 5.78 6.28 7.21 4.82 0.48 2.48 1.57 2.10 1.31 2.07 1.52 2.49 3.61 7.19 1.51 2.07 4.75