Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GARS Gene 0 302.14 474.46 370.25 540.62 292.07 343.41 292.54 190.85 149.13 194.57 631.68 768.69 1097.03 557.80 534.03 380.94 420.97 333.95 306.42 284.82 336.53 390.49 218.09 2 389266 Transcript 0 23.61 10.34 0.00 0.64 11.87 17.81 25.02 0.00 0.58 0.62 3.09 0.00 1.49 11.51 21.32 6.59 8.02 1.46 8.07 8.79 9.44 1.37 32.56 3 454308 Transcript 0 1.76 0.33 1.31 5.26 10.01 13.25 3.34 3.58 2.30 2.82 13.62 10.21 10.86 16.09 11.12 9.54 7.20 6.21 5.35 6.94 9.22 5.57 1.66 4 478124 Transcript 0 5.85 5.25 20.14 38.53 6.82 1.71 11.84 4.22 4.48 2.48 3.86 9.08 8.30 5.48 5.65 6.59 7.27 2.90 12.01 7.80 1.00 7.74 7.78 5 484093 Transcript 0 2.32 1.63 7.07 11.79 1.85 2.42 4.40 1.67 1.68 0.27 6.63 10.42 11.89 5.81 5.99 5.59 7.02 3.82 2.13 2.90 1.95 3.21 2.94 6 470392 Transcript 0 6.37 5.38 20.37 26.69 7.17 6.04 14.72 4.21 4.79 4.40 18.44 22.03 35.87 9.13 8.69 9.14 19.09 5.50 4.83 8.60 4.41 8.65 4.11 7 444666 Transcript 0 6.15 1.52 3.67 5.40 3.54 2.81 4.38 0.99 1.17 2.79 10.12 16.09 16.25 6.28 1.59 1.52 4.29 0.83 0.81 1.35 2.23 1.95 1.85 8 465748 Transcript 0 13.92 24.46 23.85 39.75 22.69 16.53 20.51 10.57 9.19 10.13 34.52 37.01 66.45 18.41 27.99 8.29 21.43 18.24 12.97 20.08 13.50 20.92 6.08 9 485784 Transcript 0 44.76 85.27 74.83 180.46 47.18 56.03 57.57 51.93 25.12 33.14 53.35 55.01 83.22 27.99 37.49 24.56 28.17 30.84 25.32 31.43 27.01 39.70 20.38 10 496643 Transcript 0 62.04 82.17 74.25 154.05 63.48 68.56 59.36 43.15 20.18 36.77 35.57 41.50 28.99 22.55 20.94 22.82 15.00 32.01 28.57 24.34 20.52 29.82 14.96 11 IG28_SR1 SilentIntergenicRegion 0 6.54 7.99 5.46 9.23 7.60 5.98 10.71 10.08 10.60 5.03 3.53 6.51 11.45 4.85 6.52 8.15 6.99 5.45 3.92 14.73 7.40 2.74 6.00 12 IG28_AR1 ActiveIntergenicRegion 0 10.32 6.52 6.44 12.90 10.26 8.82 11.49 15.88 16.16 9.78 5.87 9.27 13.17 7.68 5.63 8.96 8.00 6.39 5.98 15.73 9.74 3.70 10.14 13 ER1a ExonRegion 0 23.61 10.34 0.00 0.64 11.87 17.81 25.02 0.00 0.58 0.62 3.09 0.00 1.49 11.51 21.32 6.59 8.02 1.46 8.07 8.79 9.44 1.37 32.56 14 E1_Ab KnownBoundary 0 2.96 0.00 3.58 2.00 0.00 4.66 2.21 0.00 0.00 0.00 0.00 0.00 0.00 4.83 4.45 0.00 8.60 0.00 4.24 0.00 3.15 0.00 0.00 15 ER1b ExonRegion 0 9.30 12.77 7.52 2.16 12.51 80.69 30.05 3.22 2.47 9.92 24.68 4.13 0.00 68.10 32.93 20.04 13.36 19.34 7.04 26.22 19.27 8.43 14.55 16 E1_Ac KnownBoundary 0 25.12 29.07 20.05 13.32 26.83 174.73 71.50 5.09 11.17 22.64 56.33 16.21 6.17 112.19 68.85 66.31 40.02 65.16 22.12 58.29 40.34 16.78 44.22 17 ER1c ExonRegion 1 19.80 41.76 41.98 48.19 31.37 124.91 56.07 32.11 29.14 41.44 223.31 37.39 50.47 251.58 177.36 150.55 163.06 206.73 108.20 110.49 167.27 91.32 114.62 18 E1a_E2a KnownJunction 0 3.78 0.00 1.30 3.43 3.82 7.33 0.00 2.01 1.79 1.40 9.48 0.00 12.99 7.59 13.35 12.48 8.70 4.48 4.80 3.26 5.00 3.00 3.93 19 E1a_E3a KnownJunction 1 7.11 126.82 128.47 165.98 91.85 163.88 52.20 83.63 79.22 124.77 429.85 138.20 197.23 534.88 265.65 467.57 229.08 528.03 415.35 210.48 300.98 393.92 405.99 20 ER2a ExonRegion 0 1.50 0.98 2.62 5.36 4.57 10.84 3.84 6.18 3.62 2.02 14.37 13.97 12.79 18.78 9.13 8.02 12.90 7.31 11.26 8.55 5.85 7.90 1.04 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 6.99 21.65 21.58 6.18 2.55 1.48 5.05 17.00 16.66 6.82 21.90 10.88 8.12 0.00 6.84 0.00 9.01 16.80 5.82 0.00 22 ER3a ExonRegion 0 55.09 180.69 149.11 246.21 127.39 281.67 167.49 141.14 120.25 162.98 680.02 405.27 305.27 637.43 307.79 368.05 412.74 474.78 256.39 295.58 461.61 342.96 262.71 23 E3a_E4a KnownJunction 0 138.84 316.26 248.90 399.45 216.13 613.11 362.31 217.12 174.25 249.87 852.64 487.66 444.61 768.21 399.28 450.91 588.12 507.85 299.87 413.29 531.04 358.28 220.24 24 ER4a ExonRegion 0 111.76 348.31 288.13 435.06 159.79 387.11 286.48 221.90 202.97 281.63 855.65 790.74 808.96 908.88 438.91 518.36 661.65 333.03 324.10 427.99 600.39 445.14 223.98 25 E4a_E5a KnownJunction 0 92.68 436.70 293.81 509.16 247.71 330.43 377.41 257.58 220.02 325.16 922.92 942.16 785.34 834.54 451.70 455.61 672.84 320.72 268.53 448.57 561.19 558.02 249.77 26 ER5a ExonRegion 0 142.37 574.34 382.76 607.61 301.21 361.66 318.24 254.48 253.03 320.71 1078.88 932.02 1060.77 996.88 530.95 634.00 693.14 577.12 413.81 492.97 616.36 642.99 332.34 27 E5a_E6a KnownJunction 0 113.65 659.49 432.51 745.99 255.26 296.02 377.02 305.34 282.58 386.62 1034.58 1094.16 1148.95 1041.21 727.86 617.36 655.45 587.23 464.67 570.01 506.02 700.51 367.06 28 ER6a ExonRegion 0 142.59 559.80 451.25 729.19 310.78 328.62 415.04 287.88 265.25 382.37 1201.94 1143.14 1272.04 1050.78 586.70 571.09 778.22 489.89 390.74 529.79 541.62 690.65 316.50 29 E6_Da KnownBoundary 0 246.12 695.80 548.03 883.27 469.78 525.89 549.96 298.77 264.49 384.69 1404.93 1055.74 1520.19 1080.76 702.15 623.17 863.02 401.77 421.09 547.77 609.43 919.24 323.18 30 ER6b ExonRegion 0 169.93 584.39 503.49 832.53 488.51 492.77 504.47 287.61 267.46 361.54 1373.96 1290.06 1493.44 1051.55 548.09 578.97 808.06 421.92 388.80 481.03 557.41 882.28 325.63 31 E6b_E7a KnownJunction 0 186.18 737.04 556.93 953.39 665.28 603.12 670.65 296.72 298.46 345.93 1266.95 1440.02 1616.13 1109.61 528.59 632.31 821.04 431.36 453.00 520.22 478.40 927.93 385.41 32 ER7a ExonRegion 0 307.09 1040.59 530.28 861.80 601.90 725.33 643.82 313.28 298.24 370.84 1228.55 1580.09 1959.15 1101.34 703.65 704.86 791.87 538.61 466.97 536.67 387.82 818.80 387.64 33 E7a_E8a KnownJunction 0 398.81 1394.29 493.80 838.85 667.23 712.94 656.43 292.61 245.28 324.71 1214.31 1702.90 1747.77 1060.28 656.04 514.31 795.04 390.91 382.32 486.03 451.65 606.82 340.26 34 ER8a ExonRegion 0 289.47 1307.17 477.08 769.73 567.53 588.40 618.73 294.73 237.44 315.08 1211.64 1595.05 1695.45 949.29 495.80 575.53 767.59 362.78 430.92 405.43 479.96 753.16 304.59 35 E8a_E9a KnownJunction 0 568.84 1358.77 671.35 1043.26 547.11 464.33 553.23 418.54 253.18 340.45 1262.69 2125.89 2420.30 1228.57 791.77 1006.49 862.27 646.59 768.96 519.77 591.46 816.30 579.02 36 ER9a ExonRegion 0 265.30 786.67 662.09 948.52 546.33 649.70 586.70 363.14 277.73 378.35 1191.35 1958.68 2020.37 1257.99 651.60 806.36 789.11 630.58 680.73 491.36 666.89 857.38 469.67 37 E9a_E11a KnownJunction 0 321.02 1234.45 711.60 1035.63 832.17 1049.23 800.18 363.83 284.52 358.85 1020.84 1885.51 2401.79 1317.04 719.58 815.77 661.80 825.09 583.17 515.04 580.71 809.51 495.02 38 ER10a ExonRegion 0 0.63 2.03 1.47 1.82 0.62 1.59 1.24 1.84 0.33 0.54 2.38 9.96 6.41 4.93 6.38 1.78 1.43 1.60 2.76 1.06 3.23 5.21 1.76 39 ER11a ExonRegion 0 315.54 1041.33 558.87 772.60 552.85 686.47 583.10 324.62 270.50 352.09 1222.96 1312.09 1723.03 1171.12 749.09 803.90 772.57 772.54 665.17 482.01 737.81 650.02 468.35 40 E11a_E12a KnownJunction 0 408.15 932.66 626.59 920.96 466.81 543.78 472.28 334.67 298.64 366.80 1156.29 1042.99 1691.93 1239.69 744.42 783.47 764.37 947.87 674.84 508.08 778.95 657.59 410.43 41 ER12a ExonRegion 0 377.43 712.46 651.87 891.16 539.35 663.19 537.78 316.25 302.12 372.29 1282.26 956.31 1660.75 1232.29 894.66 844.86 826.62 882.33 647.07 519.37 896.46 646.89 470.27 42 E12a_E13a KnownJunction 0 430.08 781.31 674.13 1051.35 666.30 687.45 761.81 305.80 287.15 331.75 1055.95 1018.38 1795.01 1072.64 927.87 656.07 612.53 815.72 474.65 578.83 884.03 641.48 416.40 43 ER13a ExonRegion 0 386.42 701.55 797.72 1118.79 520.38 781.93 598.50 354.49 304.33 365.03 1236.09 1181.62 2029.39 1237.23 1043.22 837.12 838.34 828.12 634.15 590.66 882.57 714.09 479.90 44 E13_Da KnownBoundary 0 3.78 0.00 23.86 25.87 0.00 0.00 4.28 0.00 6.22 0.00 7.05 12.60 12.99 10.18 15.45 11.96 4.21 1.99 4.80 2.75 0.00 0.00 8.54 45 E13a_E14b KnownJunction 0 597.37 676.06 905.26 1259.15 604.84 774.27 662.75 378.74 309.17 399.41 1383.82 1119.21 2074.05 1089.24 1106.25 602.75 1061.99 520.12 542.42 625.24 740.71 839.45 445.25 46 ER13b ExonRegion 0 4.01 1.23 12.67 21.76 3.07 3.25 7.57 1.50 3.03 0.01 10.88 10.87 17.36 6.70 5.59 9.40 12.61 6.03 1.50 4.75 0.67 1.21 4.12 47 ER14a ExonRegion 0 6.37 5.38 20.37 26.69 7.17 6.04 14.72 4.21 4.79 4.40 18.44 22.03 35.87 9.13 8.69 9.14 19.09 5.50 4.83 8.60 4.41 8.65 4.11 48 E14_Ab KnownBoundary 0 6.82 0.00 15.79 14.35 8.66 2.78 4.46 1.73 2.98 1.02 6.95 6.30 5.68 2.47 5.44 0.00 8.42 1.87 0.00 3.26 0.00 0.00 0.00 49 E14_Ac KnownBoundary 0 368.88 333.82 562.49 871.78 287.52 388.30 463.27 233.92 189.70 210.87 786.20 528.77 1262.58 506.98 534.89 314.19 506.31 261.36 290.74 362.03 385.43 454.96 223.99 50 ER14b ExonRegion 0 485.04 594.31 890.74 1211.95 559.68 702.80 648.41 368.45 307.13 376.09 1509.92 1166.07 2223.86 1093.03 1072.25 606.56 1041.43 501.36 556.91 633.15 745.96 822.30 427.04 51 ER14c ExonRegion 0 771.72 820.62 840.39 1316.02 694.63 749.24 699.04 433.36 309.46 406.09 1426.28 1498.81 2713.80 1122.77 1188.86 646.23 887.27 528.85 548.41 653.41 516.50 809.89 360.39 52 E14_Da KnownBoundary 0 7.33 3.35 37.58 39.62 3.82 8.01 6.45 8.87 4.46 2.79 7.74 0.00 0.00 7.36 8.90 10.85 25.06 8.29 4.80 15.28 0.00 3.00 3.50 53 E14a_E15a KnownJunction 0 1058.26 1098.16 839.59 1301.30 764.86 875.92 897.12 501.06 327.28 408.52 1533.07 1468.68 2547.07 910.18 1331.61 555.15 976.25 359.86 459.40 631.82 356.58 779.01 286.56 54 ER14d ExonRegion 0 5.85 5.25 20.14 38.53 6.82 1.71 11.84 4.22 4.48 2.48 3.86 9.08 8.30 5.48 5.65 6.59 7.27 2.90 12.01 7.80 1.00 7.74 7.78 55 ER15a ExonRegion 0 779.74 1318.42 909.28 1361.79 750.98 974.37 871.35 517.31 350.16 448.61 1743.14 1762.85 3328.67 956.95 1394.42 557.65 1028.57 412.74 573.81 723.65 353.54 1024.90 361.86 56 E15a_E16a KnownJunction 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.48 18.76 13.64 0.00 0.00 0.00 4.77 1.87 0.00 0.00 0.00 3.12 0.00 57 E15a_E17b KnownJunction 0 776.51 1568.87 1138.90 1792.18 1003.23 1425.32 1284.43 623.71 450.00 563.97 1822.30 2084.48 3878.97 1075.47 1772.67 552.76 1057.97 510.25 728.49 871.70 403.84 1155.29 450.63 58 ER16a ExonRegion 0 11.85 1.20 5.94 10.03 2.90 2.64 13.13 2.97 1.74 3.83 15.84 16.90 21.81 11.78 4.76 4.57 8.10 0.62 2.42 4.06 6.68 2.72 5.54 59 E16a_E17b KnownJunction 0 6.59 3.35 3.37 6.16 7.72 5.79 0.00 0.00 1.77 4.54 7.05 12.60 13.31 7.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER17a ExonRegion 0 13.92 24.46 23.85 39.75 22.69 16.53 20.51 10.57 9.19 10.13 34.52 37.01 66.45 18.41 27.99 8.29 21.43 18.24 12.97 20.08 13.50 20.92 6.08 61 E17_Ab KnownBoundary 0 15.71 9.14 17.09 42.05 15.96 0.00 17.75 6.94 6.48 6.63 13.64 19.21 39.93 2.47 6.18 0.00 8.42 18.20 8.38 15.40 8.59 10.90 3.67 62 ER17b ExonRegion 0 515.08 1001.13 965.72 1505.29 939.24 1208.28 990.55 536.85 377.92 497.98 1550.27 2374.67 3559.43 1146.63 1545.26 655.45 912.59 521.66 565.37 767.81 469.48 921.05 360.89 63 E17_Da KnownBoundary 0 577.88 818.21 948.75 1435.28 1112.22 1208.05 982.31 510.71 335.44 459.90 1324.91 2892.64 3579.15 1143.04 1432.97 603.43 772.98 444.67 413.09 704.24 487.30 696.78 275.21 64 ER17c ExonRegion 0 637.58 629.39 985.49 1433.45 720.25 755.53 578.25 498.41 374.70 461.68 1550.96 2889.15 4346.75 1027.70 1525.40 798.78 878.20 846.30 593.30 758.95 495.27 848.19 391.05 65 E17b_E18b KnownJunction 1 1333.50 765.92 1261.99 1939.98 604.08 655.82 598.23 569.90 463.10 545.24 1719.44 3391.71 6248.78 1099.89 1996.54 1584.97 1090.88 1296.41 1042.57 852.72 612.89 1164.84 820.34 66 I17_AR7 ActiveIntronRegion 0 37.96 55.60 34.37 83.41 41.73 43.57 37.27 42.47 19.75 22.71 46.17 32.77 26.72 27.08 24.42 11.21 14.08 14.34 15.12 17.56 8.95 14.87 11.82 67 E18_Aa NovelBoundary 0 84.16 86.37 49.91 171.97 50.59 100.96 114.34 40.99 23.38 29.15 38.80 77.28 45.13 41.79 38.32 12.30 27.21 32.00 33.22 25.89 23.97 41.64 15.88 68 ER18a ExonRegion 0 44.76 85.27 74.83 180.46 47.18 56.03 57.57 51.93 25.12 33.14 53.35 55.01 83.22 27.99 37.49 24.56 28.17 30.84 25.32 31.43 27.01 39.70 20.38 69 E18_Ab KnownBoundary 0 56.01 166.42 101.06 208.86 44.31 46.56 87.71 70.98 24.80 47.49 35.85 61.22 161.68 37.61 24.11 28.45 20.76 25.66 17.13 39.25 19.03 43.17 24.50 70 ER18b ExonRegion 0 999.00 746.50 1335.43 1739.04 502.95 661.86 528.20 592.04 413.15 543.99 1734.27 2829.00 4086.38 1459.68 2085.88 1273.03 1141.68 1164.48 1127.17 884.67 948.76 1294.58 755.44 71 E18a_E19b KnownJunction 0 1544.20 767.30 1279.79 1165.79 600.42 733.67 566.96 539.47 349.59 500.55 1848.36 2244.28 2896.40 1067.40 1787.88 637.61 1388.12 641.62 482.65 747.19 1290.47 594.70 379.87 72 I18 Intron 0 37.16 89.23 55.94 112.32 43.42 55.57 46.48 30.72 16.76 24.90 20.80 48.20 53.49 12.28 15.66 9.35 14.76 13.41 15.82 13.74 8.03 18.63 5.84 73 I18_AR1 ActiveIntronRegion 0 37.27 89.52 56.12 112.68 43.56 55.75 46.62 30.82 16.82 24.99 20.87 48.36 53.65 12.32 15.71 9.38 14.81 13.46 15.87 13.78 8.05 18.69 5.85 74 E19_Aa NovelBoundary 0 40.67 51.64 68.95 185.42 42.44 42.13 60.81 62.10 20.37 58.61 37.48 48.32 21.43 13.89 19.41 17.00 7.85 19.15 32.38 34.07 25.14 36.01 4.35 75 ER19a ExonRegion 0 62.04 82.17 74.25 154.05 63.48 68.56 59.36 43.15 20.18 36.77 35.57 41.50 28.99 22.55 20.94 22.82 15.00 32.01 28.57 24.34 20.52 29.82 14.96 76 E19_Ab KnownBoundary 0 87.27 32.10 92.78 170.57 50.00 74.33 52.02 42.06 10.88 53.80 25.95 15.30 20.45 28.37 9.52 15.55 8.60 20.93 20.52 17.39 18.22 22.66 10.84 77 ER19b ExonRegion 0 1527.38 878.95 960.53 1194.50 561.15 709.19 524.77 414.63 314.15 452.82 1271.36 2532.67 3186.17 1047.26 1580.46 601.06 910.39 664.60 461.56 663.40 955.05 557.10 347.26 78 E19_Da KnownBoundary 1 2102.15 1215.38 908.25 1277.76 609.68 720.95 585.60 388.11 298.81 404.38 1041.16 2705.98 3127.07 1025.90 1809.63 606.68 688.17 702.10 494.70 614.56 743.55 527.59 340.43 79 ER19c ExonRegion 0 1718.50 1918.43 1218.57 1546.70 870.24 1028.81 830.54 561.07 364.55 512.83 1299.62 2386.12 3370.29 1222.99 1933.79 1189.20 943.85 1243.04 979.76 704.82 978.86 919.59 680.70 80 E19_Db NovelBoundary 0 269.90 1098.03 667.27 734.74 653.57 544.91 404.84 276.10 191.72 241.27 633.63 844.03 1228.82 563.19 940.73 340.08 434.22 353.06 297.70 365.93 500.09 337.40 230.22 81 E19c_E20a KnownJunction 0 290.57 1447.70 939.17 1218.69 966.64 741.68 559.45 402.61 273.96 367.04 1083.85 1167.98 2609.73 858.97 1310.84 550.54 640.02 498.48 429.38 550.20 649.40 649.14 352.63 82 ER19d ExonRegion 0 263.98 1350.97 843.40 1046.62 868.58 694.81 487.29 371.14 263.01 343.50 1014.88 1213.45 2294.47 848.42 1283.97 514.34 633.59 496.43 404.72 508.39 691.96 573.32 342.12 83 ER20a ExonRegion 1 267.12 502.41 830.91 1120.30 462.33 394.10 312.71 345.83 246.09 306.72 793.86 1024.54 1891.17 724.34 1392.49 553.17 643.17 321.32 507.91 391.82 473.24 665.17 309.96 84 E20_Da KnownBoundary 1 264.19 267.85 412.23 611.88 175.13 148.04 142.29 147.50 107.90 143.95 182.20 434.69 797.84 169.88 224.74 121.85 209.44 61.43 135.72 131.73 102.61 304.39 66.92 85 ER20b ExonRegion 1 1866.63 1631.36 373.49 673.34 685.14 401.90 378.54 122.30 108.10 119.13 309.64 719.58 1560.97 384.65 811.11 421.24 394.97 87.89 418.48 135.82 106.97 426.59 206.50 86 IG29_AR3 ActiveIntergenicRegion 0 1.83 0.88 29.14 3.94 2.60 2.17 3.57 3.05 5.56 1.47 0.83 0.00 0.92 0.00 0.00 0.32 0.71 2.38 0.34 4.13 0.24 0.22 2.22