Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ADCYAP1R1 Gene 0 23.48 183.13 138.26 113.79 30.66 20.19 56.44 70.42 86.26 70.48 0.00 0.05 0.00 0.03 0.02 0.00 0.00 260.45 157.06 217.83 2.52 35.70 14.32 2 304166 Transcript 0 16.94 123.28 91.04 76.48 21.15 12.60 38.28 43.04 50.29 39.46 0.00 0.04 0.00 0.02 0.01 0.00 0.00 135.77 89.14 119.16 1.28 21.08 8.37 3 381666 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 381665 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 381667 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 409363 Transcript 0 0.00 19.93 17.21 21.71 7.98 0.00 3.62 7.15 8.62 17.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 88.88 122.07 114.86 5.81 17.39 0.00 7 431811 Transcript 0 0.00 0.60 0.54 0.00 0.00 0.00 0.39 0.00 0.27 0.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.71 3.29 1.89 0.00 0.00 0.00 8 396211 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 409489 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 436116 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ER1a ExonRegion 0 0.00 2.03 0.00 0.93 0.00 0.00 3.39 1.24 1.90 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.57 12.42 8.85 0.00 1.96 0.00 12 E1_Ab KnownBoundary 0 0.00 0.00 1.66 2.00 0.00 0.00 0.00 4.52 4.75 3.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.38 16.19 11.70 0.00 0.00 0.00 13 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 6.67 0.00 7.75 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.70 0.00 12.02 0.00 2.82 0.00 14 ER1b ExonRegion 0 0.00 0.96 0.36 1.36 0.00 0.00 4.67 1.73 3.71 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.91 9.18 17.15 0.78 2.45 0.00 15 ER1c ExonRegion 0 0.21 7.70 6.11 5.63 0.00 1.86 1.74 5.13 11.22 14.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69.36 32.63 55.07 1.40 3.53 0.99 16 E1a_E3a KnownJunction 0 3.41 18.22 8.90 12.69 0.00 0.00 2.25 16.31 23.32 29.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 105.83 27.39 95.56 0.00 9.06 0.00 17 ER2a ExonRegion 0 0.00 1.20 1.08 0.00 0.00 0.00 0.78 0.00 0.54 0.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.42 6.57 3.79 0.00 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 1.66 28.91 11.59 10.10 2.21 0.08 4.92 16.61 22.04 31.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 89.42 37.32 117.39 3.83 12.68 6.89 20 E3_Ab KnownBoundary 0 0.00 48.28 20.05 16.12 3.82 0.00 7.60 22.55 36.20 42.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 181.69 61.27 152.00 5.13 9.37 12.04 21 ER3b ExonRegion 0 0.00 27.08 13.85 18.51 2.25 1.21 8.80 14.94 22.49 44.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 139.89 88.44 133.51 2.41 14.45 6.34 22 E3a_E4a KnownJunction 0 3.48 15.98 29.18 28.07 0.00 0.00 14.18 22.88 29.28 50.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 154.17 55.81 199.17 2.66 16.47 3.84 23 ER4a ExonRegion 0 1.84 38.35 40.10 30.15 10.96 16.90 17.06 30.54 38.65 47.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 204.07 110.02 204.86 5.72 14.72 3.10 24 E4a_E5a KnownJunction 0 7.26 43.22 49.70 33.46 4.24 22.60 27.78 28.30 49.10 58.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 270.77 173.56 211.05 8.28 21.37 8.19 25 E4a_E8a NovelJunction 0 0.00 3.35 1.66 0.00 0.00 0.00 0.00 1.64 3.44 9.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.60 9.51 9.40 0.00 0.00 0.00 26 ER5a ExonRegion 0 6.84 35.32 38.72 44.60 6.26 9.54 26.13 42.52 55.56 55.32 0.00 0.00 0.00 0.60 0.00 0.00 0.00 317.24 182.35 225.37 2.61 26.54 16.54 27 E5_Da KnownBoundary 0 6.82 30.06 36.25 61.96 4.33 5.28 33.70 54.79 58.48 52.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 318.28 130.92 230.74 2.35 24.06 7.94 28 ER5b ExonRegion 0 4.13 26.86 38.13 45.20 6.47 3.71 14.99 40.88 58.97 46.89 0.00 0.00 0.00 0.68 0.00 0.00 0.00 245.92 122.75 203.07 5.79 23.02 4.51 29 E5b_E6a KnownJunction 0 3.78 15.33 16.62 20.08 0.00 2.90 8.92 17.70 43.11 28.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67.28 4.80 71.72 0.00 2.69 0.00 30 E5b_E7a NovelJunction 0 0.00 3.03 0.00 1.93 0.00 0.00 0.00 0.00 0.00 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.19 36.61 14.00 0.00 0.00 0.00 31 E5b_E8a KnownJunction 0 0.00 19.93 17.21 21.71 7.98 0.00 3.62 7.15 8.62 17.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 88.88 122.07 114.86 5.81 17.39 0.00 32 E6a_E7a KnownJunction 0 3.48 25.46 22.62 7.66 4.33 5.05 6.05 26.29 29.43 10.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73.62 33.98 118.63 0.00 5.33 6.91 33 ER6a ExonRegion 0 3.73 17.72 29.53 15.97 2.68 3.67 6.12 31.44 50.93 28.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 107.35 23.51 103.04 0.00 3.97 2.66 34 ER7a ExonRegion 0 2.02 28.52 33.79 20.44 1.27 6.68 5.99 41.19 51.79 33.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 141.92 35.27 111.55 0.00 10.67 5.80 35 E7a_E8a KnownJunction 0 0.00 35.45 39.35 28.47 0.00 10.73 8.26 44.69 45.08 34.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 131.28 21.08 86.16 0.00 11.21 0.00 36 ER8a ExonRegion 0 5.16 60.80 59.61 42.29 12.94 17.82 34.11 50.53 74.33 71.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 294.73 215.53 228.14 1.94 32.03 12.49 37 E8a_E9a KnownJunction 0 13.78 136.42 78.35 61.66 22.50 18.17 49.15 65.06 96.15 89.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 419.05 229.09 279.51 3.03 51.99 11.61 38 ER9a ExonRegion 0 5.42 90.33 81.94 58.77 8.87 13.90 41.60 65.38 83.04 84.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 392.36 204.58 278.68 3.15 43.20 14.92 39 E9a_E10a KnownJunction 0 6.59 54.73 98.67 41.39 0.00 33.16 44.30 59.64 75.69 79.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 267.08 206.31 273.05 0.00 29.45 8.71 40 ER10a ExonRegion 0 4.31 86.65 83.95 46.88 10.30 21.14 39.97 55.21 87.02 77.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 311.84 233.47 282.87 3.84 34.62 10.91 41 E10a_E11a KnownJunction 0 9.78 119.98 129.65 56.70 30.48 14.59 37.63 68.76 102.05 72.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 369.27 222.22 255.29 2.90 49.23 15.79 42 ER11a ExonRegion 0 9.28 131.73 93.77 58.03 16.44 15.04 47.35 67.95 95.13 70.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 295.59 229.30 261.31 4.05 39.75 7.17 43 E11a_E12a KnownJunction 0 9.93 166.22 81.75 58.40 15.11 32.99 45.84 62.84 95.49 68.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 313.30 167.91 220.00 6.30 36.74 0.00 44 E12_Ab NovelBoundary 0 25.86 126.10 76.67 57.04 17.06 20.73 64.43 50.19 91.69 60.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 249.38 173.09 287.76 2.90 52.23 4.35 45 ER12a ExonRegion 0 11.75 117.95 75.68 54.33 10.61 18.78 54.01 56.68 91.70 66.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 292.01 160.81 252.46 6.08 47.85 2.33 46 ER12b ExonRegion 0 13.49 116.49 96.42 68.74 13.38 20.97 71.25 54.61 84.72 72.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 306.32 166.24 267.75 1.17 41.21 9.45 47 E12a_E13a KnownJunction 0 10.52 176.81 122.88 95.23 16.89 29.64 79.85 57.50 83.39 86.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 364.38 178.55 269.79 0.00 34.41 19.72 48 ER13a ExonRegion 0 10.85 119.46 125.99 113.55 29.59 22.61 48.04 73.53 93.34 92.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 365.06 215.29 283.77 4.79 57.15 22.70 49 E13a_E14a KnownJunction 0 10.08 164.77 142.54 130.59 58.91 26.18 73.88 93.73 108.88 87.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 393.14 265.61 295.55 5.00 92.22 29.54 50 ER14a ExonRegion 0 10.26 160.74 125.85 110.53 42.58 17.70 54.69 75.54 90.16 77.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 354.25 233.85 286.31 2.80 62.69 17.11 51 E14a_E15a KnownJunction 0 0.00 34.80 15.58 19.11 3.90 0.00 7.64 4.27 3.99 3.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.09 53.74 56.57 0.00 11.51 4.10 52 E14a_E16a KnownJunction 0 14.60 69.40 34.24 46.88 28.61 13.34 19.87 68.92 89.47 39.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 198.93 105.04 157.94 0.00 3.12 0.00 53 E14a_E17a KnownJunction 0 3.48 38.02 36.49 29.33 3.31 0.00 23.89 3.57 17.30 26.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 107.16 65.04 62.51 6.12 21.74 15.62 54 ER15a ExonRegion 0 0.05 25.37 10.52 10.92 0.06 0.00 9.98 2.02 2.79 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.84 31.51 29.23 0.00 13.20 4.61 55 E15a_E16a KnownJunction 0 0.00 10.33 3.08 1.66 0.00 0.00 0.00 0.00 2.66 3.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.95 19.77 2.62 0.00 0.00 0.00 56 E15a_E17a KnownJunction 0 0.00 24.40 7.81 10.89 0.00 0.00 6.76 0.00 0.00 4.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.47 8.09 2.62 0.00 9.31 11.87 57 ER16a ExonRegion 0 5.06 112.04 48.05 58.81 17.49 17.62 17.72 40.89 74.97 31.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 264.91 128.25 178.70 0.00 6.23 4.40 58 E16a_E17a KnownJunction 0 3.04 142.74 41.57 80.78 15.79 6.81 12.23 50.07 86.78 23.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 320.68 128.85 216.87 0.00 6.00 7.00 59 I16_AR1 ActiveIntronRegion 0 2.15 27.08 14.67 25.00 1.90 1.86 9.22 8.58 10.15 6.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.43 14.60 29.50 0.00 2.97 1.79 60 ER17a ExonRegion 0 10.52 155.91 112.19 93.98 27.05 13.95 46.86 75.15 101.74 87.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 379.02 209.20 292.93 2.15 46.83 19.56 61 E17a_E18a KnownJunction 0 13.04 138.07 96.63 71.89 23.77 5.00 33.48 54.30 78.47 51.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 256.60 176.57 239.82 2.66 48.74 6.83 62 ER18a ExonRegion 0 12.30 97.99 72.26 81.26 25.50 9.80 31.82 47.69 82.87 63.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 172.53 155.49 205.58 0.83 27.67 15.51 63 E18_Da NovelBoundary 0 2.96 50.06 38.38 39.76 33.79 2.10 23.27 24.32 46.27 32.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74.78 73.60 97.35 0.00 9.00 13.91 64 E18b_E19a KnownJunction 0 24.89 112.28 64.99 101.85 22.92 21.29 36.43 51.18 86.57 74.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 190.40 211.30 245.38 0.00 30.07 28.08 65 ER18b ExonRegion 0 16.30 93.34 70.21 83.41 29.43 16.87 33.50 55.83 88.19 75.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 202.70 181.25 232.34 0.00 29.38 22.61 66 ER19a ExonRegion 0 14.45 138.38 104.83 91.59 15.77 20.99 42.61 72.75 95.15 83.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 347.91 208.27 294.06 1.58 42.44 22.22 67 E19_Da KnownBoundary 0 13.34 101.63 116.29 89.40 4.33 19.19 52.55 59.02 68.55 59.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 384.40 136.29 233.75 0.00 32.94 16.48 68 ER19b ExonRegion 0 2.96 84.01 98.65 59.62 8.66 13.33 37.37 59.70 85.29 68.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 303.82 146.41 230.23 2.66 39.32 12.09 69 E19_Db KnownBoundary 0 2.96 81.24 88.88 52.74 12.05 7.10 37.05 69.62 74.48 69.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 375.69 132.71 251.19 2.53 48.31 0.00 70 ER19c ExonRegion 0 13.39 114.21 115.59 90.36 11.79 17.61 36.29 78.08 109.25 94.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 488.03 205.48 278.54 5.99 41.28 15.46 71 E19_Dc KnownBoundary 0 0.00 105.11 52.60 67.62 0.00 5.74 42.62 54.46 79.63 59.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 220.03 118.87 214.95 2.47 31.84 0.00 72 ER19d ExonRegion 0 11.36 130.76 82.57 52.31 13.54 10.35 33.66 53.06 76.24 74.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 295.41 101.47 185.49 1.45 24.61 10.06 73 E19_Dd KnownBoundary 0 10.67 224.76 111.35 61.76 24.36 21.92 39.17 42.92 80.61 64.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 370.43 103.16 217.64 2.41 32.64 16.22 74 ER19e ExonRegion 0 33.89 244.53 182.08 152.02 42.30 25.19 73.17 84.83 98.68 77.79 0.00 0.09 0.00 0.03 0.02 0.00 0.00 261.97 165.86 229.48 2.56 40.21 16.74 75 IG32 Intergenic 0 6.42 47.28 47.47 25.40 10.66 2.40 19.13 23.76 18.21 9.98 0.00 0.04 0.00 0.00 0.00 0.00 0.00 30.53 22.58 39.27 0.66 17.26 3.81 76 IG32_SR1 SilentIntergenicRegion 0 7.21 30.58 32.38 18.95 10.70 3.47 31.86 27.59 33.33 16.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59.28 44.51 78.34 1.42 27.15 7.09 77 IG32_AR2 ActiveIntergenicRegion 0 5.91 60.73 42.66 24.10 12.92 3.25 27.40 29.52 24.22 11.56 0.00 0.17 0.00 0.00 0.00 0.00 0.00 43.02 35.18 59.40 1.12 24.06 3.93 78 IG32_SR2 SilentIntergenicRegion 0 12.43 87.12 78.30 37.79 14.69 4.09 27.87 27.54 21.36 14.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.67 38.65 54.36 1.03 24.22 8.59 79 IG32_AR3 ActiveIntergenicRegion 0 17.09 131.73 148.01 65.81 24.60 4.21 30.91 51.58 31.73 21.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78.87 48.78 73.03 1.77 39.47 8.39 80 IG32_SR3 SilentIntergenicRegion 0 14.00 105.43 135.34 57.62 24.22 4.92 28.99 38.92 31.45 11.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.29 27.12 58.29 0.55 35.01 8.32 81 IG32_AR4 ActiveIntergenicRegion 0 2.81 11.74 13.50 13.37 4.17 1.17 8.34 11.01 5.85 6.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.41 3.87 15.98 0.00 5.17 0.85