Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MRPS24 Gene 0 47.42 45.48 164.05 68.53 36.87 67.68 26.98 49.62 29.92 47.60 116.31 15.34 14.33 85.67 149.74 58.59 88.33 56.46 66.83 56.60 86.14 74.17 60.99 2 467084 Transcript 0 0.00 0.46 0.69 0.00 0.00 0.17 0.70 0.00 0.56 0.34 0.00 0.00 0.00 0.18 3.05 0.30 0.00 0.00 4.48 0.16 1.16 10.90 12.84 3 317534 Transcript 0 15.72 13.07 7.88 0.00 1.53 31.17 13.24 3.46 3.18 0.49 16.02 0.00 0.00 12.06 33.57 19.53 8.96 2.64 4.55 6.38 11.65 14.58 20.14 4 418740 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 414932 Transcript 0 8.77 7.18 4.40 4.54 10.61 6.54 6.59 5.43 3.32 1.96 4.75 7.84 10.32 5.66 9.47 6.60 5.71 2.06 5.63 7.02 2.46 17.85 12.69 6 83014 Transcript 0 0.00 0.00 103.86 30.32 0.00 0.00 0.00 20.64 15.18 31.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.11 0.00 0.00 0.00 0.00 0.00 7 483330 Transcript 0 2.73 4.36 10.83 4.43 16.02 4.15 11.20 4.96 1.19 1.63 2.06 0.11 0.25 2.56 3.51 2.23 3.34 3.31 0.54 5.04 2.61 2.00 0.58 8 IG33_AR2 ActiveIntergenicRegion 0 0.00 3.39 2.45 2.73 0.00 12.84 6.62 1.73 0.00 2.29 0.00 4.33 4.69 1.62 0.00 5.94 0.00 9.24 3.19 12.41 10.28 2.08 0.00 9 ER1a ExonRegion 0 0.00 0.92 1.38 0.00 0.00 0.35 1.40 0.00 1.11 0.68 0.00 0.00 0.00 0.36 1.64 0.60 0.00 0.00 0.48 0.33 2.32 21.81 21.42 10 E1_Ab KnownBoundary 0 0.00 0.00 1.18 0.00 0.00 13.06 0.00 0.00 0.00 1.58 0.00 0.00 0.00 2.41 14.22 4.02 0.00 4.56 0.00 0.00 0.00 20.27 7.77 11 ER1b ExonRegion 0 4.04 1.48 1.11 0.00 0.00 9.84 2.69 1.15 1.57 0.94 1.41 0.00 0.00 4.08 15.56 8.83 2.20 0.00 4.25 2.19 2.94 15.97 17.44 12 E1_Da KnownBoundary 0 0.00 0.00 1.77 0.00 0.00 2.90 1.90 2.26 1.56 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.20 0.00 2.81 0.00 6.00 8.45 13 E1a_E1f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 8.47 0.00 0.00 0.00 4.27 14 E1_Ac KnownBoundary 0 3.78 0.00 0.00 1.96 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 4.80 0.00 6.30 0.00 4.35 15 E1_Ad KnownBoundary 0 0.00 6.71 1.83 0.00 0.00 5.74 6.62 2.55 1.79 0.00 0.00 0.00 0.00 0.00 0.00 8.72 0.00 0.00 0.00 0.00 3.15 6.25 0.00 16 E1_Ae KnownBoundary 1 132.10 94.72 48.90 22.91 82.85 261.55 74.33 17.42 11.31 11.17 136.93 0.00 5.68 75.87 198.28 68.79 114.63 56.04 54.12 30.68 65.30 25.11 65.22 17 ER1c ExonRegion 0 15.72 13.07 7.88 0.00 1.53 31.17 13.24 3.46 3.18 0.49 16.02 0.00 0.00 12.06 33.57 19.53 8.96 2.64 4.55 6.38 11.65 14.58 20.14 18 ER1d ExonRegion 0 33.86 26.03 15.81 3.68 7.76 67.48 22.11 4.67 5.56 2.87 34.60 0.00 0.00 21.44 71.66 30.32 21.13 15.34 8.92 9.36 26.00 16.46 34.95 19 ER1e ExonRegion 1 138.28 118.63 66.03 26.50 86.52 286.89 90.18 25.54 16.74 21.28 167.73 0.00 0.00 123.07 286.26 88.50 177.15 96.49 55.92 56.50 112.14 40.28 85.82 20 ER1f ExonRegion 1 634.49 449.77 270.75 135.29 396.92 883.89 280.10 83.43 61.27 98.61 608.44 0.42 0.00 428.41 977.23 359.26 668.55 340.44 269.20 217.54 515.94 154.94 309.78 21 E1_Db KnownBoundary 1 81.05 65.05 71.32 12.15 22.67 52.53 43.37 13.51 4.83 16.65 40.06 0.00 0.00 19.07 56.25 53.49 7.39 77.14 80.00 25.38 43.12 28.60 84.34 22 E1b_E1f KnownJunction 1 1022.77 623.11 497.76 275.99 541.68 1102.43 339.35 152.47 105.87 164.96 726.97 0.00 0.00 253.69 696.34 424.50 777.75 523.80 308.81 275.80 647.86 216.52 375.09 23 ER1g ExonRegion 0 21.14 22.02 34.37 4.39 9.48 25.36 10.26 3.48 3.75 8.96 15.77 0.05 0.00 9.64 20.31 12.22 9.62 18.68 24.78 9.61 16.87 10.78 25.20 24 E1_Af KnownBoundary 0 3.11 2.76 14.43 1.76 3.57 0.00 3.53 2.26 4.54 7.68 5.26 0.00 0.00 7.30 0.00 0.00 0.00 5.14 0.00 9.52 8.65 2.88 0.00 25 ER1h ExonRegion 1 346.38 288.48 355.74 177.33 209.09 421.93 153.47 111.61 75.13 134.74 333.12 7.67 1.88 168.07 332.57 196.33 320.00 370.34 150.26 135.14 336.73 124.12 162.02 26 E1_Dc KnownBoundary 0 113.35 156.42 279.59 107.51 108.23 213.06 101.04 88.02 43.34 93.96 163.94 12.90 7.30 117.66 125.22 88.95 96.68 175.06 73.23 91.34 163.71 87.75 61.80 27 E1c_E1g KnownJunction 0 0.00 0.00 56.59 32.50 0.00 0.00 0.00 22.43 10.62 30.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.96 0.00 0.00 0.00 0.00 0.00 28 ER1i ExonRegion 0 75.84 116.59 269.79 112.21 65.56 130.20 67.52 76.34 43.23 92.52 126.60 10.10 5.47 98.26 134.42 71.83 90.22 205.41 59.46 71.63 145.44 68.06 53.84 29 E1d_E2b KnownJunction 0 12.59 23.55 161.02 23.64 4.33 47.70 10.33 33.93 15.94 22.43 44.54 6.30 6.82 79.52 143.89 19.91 29.08 36.35 26.17 54.39 64.37 30.62 56.68 30 ER1j ExonRegion 0 26.97 62.06 207.81 57.59 39.15 77.63 35.45 51.15 24.38 59.21 85.91 10.10 14.76 78.26 106.70 38.20 50.61 101.56 42.47 61.78 92.31 49.46 49.92 31 E2_Aa NovelBoundary 0 6.08 5.39 12.95 2.96 35.48 26.58 8.57 4.56 0.00 0.00 0.00 0.00 0.00 0.00 5.19 4.36 0.00 0.00 0.00 0.00 2.35 2.88 11.27 32 ER2a ExonRegion 0 2.73 4.36 10.83 4.43 16.02 4.15 11.20 4.96 1.19 1.63 2.06 0.11 0.25 2.56 3.51 2.23 3.34 3.31 0.54 5.04 2.61 2.00 0.58 33 E2_Ab KnownBoundary 0 3.11 0.00 12.27 6.03 3.23 8.52 5.87 3.82 1.77 1.32 0.00 0.00 0.00 2.47 0.00 0.00 4.11 4.31 0.00 0.00 2.41 0.00 0.00 34 E2a_E2c KnownJunction 0 0.00 0.00 151.12 28.13 0.00 0.00 0.00 18.85 19.73 32.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.26 0.00 0.00 0.00 0.00 0.00 35 E2_Ac KnownBoundary 1 52.23 26.18 327.55 77.38 50.85 34.07 41.42 53.40 46.04 88.73 377.67 6.00 6.01 155.40 307.93 54.17 428.24 69.85 122.26 104.38 434.17 71.15 80.16 36 ER2b ExonRegion 1 26.33 18.71 269.73 53.10 17.45 46.14 25.68 49.92 33.40 62.48 159.27 6.06 10.88 122.78 198.10 30.32 152.37 61.20 62.31 65.45 199.04 50.09 59.91 37 ER2c ExonRegion 1 44.87 24.81 317.86 65.15 29.43 42.54 27.54 56.00 44.46 83.95 368.02 10.39 9.38 195.54 268.66 50.53 410.63 56.91 105.12 102.55 386.09 70.01 84.58 38 ER2d ExonRegion 1 57.54 53.15 567.98 204.00 43.04 52.59 19.73 170.73 87.98 167.05 566.10 28.49 8.11 374.65 777.18 160.42 556.91 202.11 211.53 275.75 498.12 193.48 194.47 39 E2_Db KnownBoundary 0 0.00 0.00 1.27 0.00 0.00 0.00 0.00 2.55 0.00 3.17 0.00 0.00 6.66 0.00 0.00 7.95 0.00 0.00 0.00 3.26 0.00 4.90 8.11 40 E2b_E3a KnownJunction 1 149.80 97.35 806.54 412.70 76.57 59.91 19.34 269.32 131.83 238.32 243.54 31.36 20.78 546.77 1392.18 476.11 197.66 486.37 366.79 385.04 241.49 356.99 407.86 41 ER2e ExonRegion 0 8.77 7.18 4.40 4.54 10.61 6.54 6.59 5.43 3.32 1.96 4.75 7.84 10.32 5.66 9.47 6.60 5.71 2.06 5.63 7.02 2.46 17.85 12.69 42 E2_Dc NovelBoundary 0 451.41 173.85 164.96 180.70 244.65 138.90 255.92 171.77 160.01 115.24 50.75 56.87 45.78 70.93 38.45 190.55 171.76 107.53 120.94 178.14 94.03 66.25 138.80 43 E3_Aa NovelBoundary 0 10.52 0.00 11.21 3.76 12.99 0.00 2.21 1.97 3.04 3.17 0.00 5.70 0.00 0.00 4.45 3.50 3.65 0.00 0.00 0.00 0.00 19.72 24.67 44 ER3a ExonRegion 0 52.00 169.96 902.32 356.69 195.31 446.69 151.21 288.71 159.39 260.18 557.57 65.06 43.50 420.48 727.51 276.37 360.45 284.13 294.18 290.45 411.73 303.22 260.50 45 E3_Da KnownBoundary 0 102.02 363.95 742.94 318.71 70.88 185.57 129.35 268.42 149.13 237.81 518.03 67.82 68.83 364.53 583.10 141.16 320.62 144.09 185.04 248.32 279.79 252.53 156.81 46 E3_Db KnownBoundary 0 689.90 434.00 1351.55 594.96 76.57 135.89 72.16 277.87 210.76 313.40 716.18 55.82 60.55 527.05 923.55 591.13 459.19 386.76 728.49 301.43 538.33 495.69 465.49 47 ER3b ExonRegion 0 293.80 367.93 1317.36 566.71 58.57 141.81 97.09 340.57 219.76 348.96 696.49 48.43 67.05 427.62 692.00 358.86 434.25 353.60 414.10 298.42 458.86 386.76 293.66 48 ER3c ExonRegion 0 211.33 132.69 629.98 280.95 60.08 85.39 35.33 165.84 110.42 176.32 390.26 59.79 54.41 306.42 455.09 207.69 242.25 150.87 292.12 166.26 224.65 300.34 176.84 49 ER3d ExonRegion 0 14.29 33.55 34.31 12.61 12.04 3.21 10.92 10.37 11.42 6.31 12.56 9.74 9.38 24.77 58.75 14.12 13.20 2.77 8.76 17.02 9.92 5.73 12.48 50 IG32_AR1 ActiveIntergenicRegion 0 8.20 5.45 17.38 10.35 15.29 17.92 10.48 26.63 11.39 13.18 2.65 1.91 8.32 4.50 5.51 4.67 4.20 10.87 8.30 16.19 7.52 7.45 8.07 51 IG32_SR1 SilentIntergenicRegion 0 7.49 8.81 10.47 3.78 11.10 25.22 12.03 18.32 9.08 14.80 2.31 1.27 3.36 5.48 3.35 2.81 5.47 10.28 7.06 11.07 12.02 4.96 7.99