Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC007128.1 Gene 0 42.04 4.66 135.56 7.62 3.70 10.80 4.90 0.39 8.06 1.63 0.10 0.00 0.00 0.00 0.00 0.00 0.00 10.20 7.94 7.18 0.00 0.00 0.00 2 424460 Transcript 0 13.68 2.07 46.19 5.34 2.50 9.16 2.35 0.54 4.33 1.41 0.06 0.00 0.00 0.00 0.00 0.00 0.00 3.77 4.18 2.96 0.00 0.00 0.00 3 435967 Transcript 0 20.40 1.16 33.43 1.50 1.56 2.26 1.54 0.00 1.24 0.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.93 2.10 1.69 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.03 0.13 0.00 5.40 0.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER2a ExonRegion 0 0.00 0.44 6.43 4.28 0.55 7.70 1.21 2.05 1.15 1.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.39 2.30 1.80 0.00 0.00 0.00 7 E2_Da NovelBoundary 0 0.00 0.00 24.30 38.06 21.05 20.27 20.23 13.43 31.77 23.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.91 18.92 2.62 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 0.00 1.66 2.06 4.33 23.05 2.21 1.64 0.00 3.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 9 I2 Intron 0 1.81 10.36 10.81 32.92 20.42 48.30 25.55 7.71 27.36 10.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.41 13.40 12.24 0.00 0.07 0.00 10 I2_SR1 SilentIntronRegion 0 1.49 9.20 9.57 31.19 18.92 47.75 25.91 8.29 26.55 11.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.93 13.12 10.59 0.00 0.00 0.00 11 I2_AR1 ActiveIntronRegion 0 2.87 13.81 14.88 39.96 24.82 52.23 26.61 6.96 31.61 10.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.56 14.28 17.47 0.00 0.04 0.00 12 I2_SR2 SilentIntronRegion 0 0.00 7.57 4.17 12.79 17.19 28.60 9.07 1.25 9.72 4.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.41 12.94 5.12 0.00 1.91 0.00 13 E3_Aa NovelBoundary 0 6.52 15.52 11.21 27.57 28.86 36.29 29.15 8.09 45.95 4.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.69 17.13 15.34 0.00 0.00 0.00 14 ER3a ExonRegion 0 1.22 5.76 4.86 27.53 10.61 26.41 4.93 1.67 13.75 4.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.46 10.16 9.55 0.00 0.00 0.00 15 E3_Da NovelBoundary 0 0.00 2.83 10.23 35.06 32.60 63.94 29.81 6.74 36.66 8.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 17.41 6.46 0.00 0.00 0.00 16 E3a_E5a KnownJunction 0 0.00 0.00 0.00 4.06 0.00 0.00 0.00 0.00 2.89 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E4_Aa NovelBoundary 0 3.63 16.31 57.92 127.69 50.17 11.47 33.12 70.15 76.04 53.35 7.90 0.00 0.00 2.88 0.00 8.63 66.01 149.56 9.32 73.31 27.61 6.18 21.34 18 ER4a ExonRegion 0 0.60 0.15 0.42 0.00 0.00 1.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E4_Da NovelBoundary 0 34.30 33.61 24.27 32.36 42.87 86.94 107.40 18.03 42.07 13.27 16.79 6.75 0.00 13.24 16.19 26.32 53.86 95.38 45.84 80.54 40.16 7.72 35.08 20 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 19.69 4.53 96.09 2.51 1.55 4.67 5.43 0.75 8.94 3.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.02 13.89 8.65 0.00 0.00 0.00 22 E5_Da NovelBoundary 0 2.82 3.35 44.97 2.06 0.00 4.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 9.41 0.00 0.00 0.00 0.00 23 E5a_E6a KnownJunction 0 2.82 2.96 75.10 2.06 0.00 5.17 0.00 0.00 7.70 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.04 4.61 5.82 0.00 0.00 0.00 24 E5a_E7a NovelJunction 0 3.19 0.00 55.62 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.84 0.00 2.75 0.00 0.00 0.00 25 I5 Intron 0 22.27 2.47 45.34 0.82 1.08 1.24 1.25 0.00 1.24 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.11 0.43 3.73 0.00 0.00 0.00 26 I5_SR1 SilentIntronRegion 0 22.33 2.48 45.46 0.82 1.09 1.24 1.25 0.00 1.24 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.12 0.43 3.74 0.00 0.00 0.00 27 E6_Aa NovelBoundary 0 3.78 2.89 48.67 0.00 3.48 8.63 5.96 0.00 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 5.05 0.00 0.00 0.00 28 ER6a ExonRegion 0 15.27 3.23 134.43 4.13 0.01 9.16 2.25 0.00 8.97 1.52 0.47 0.00 0.00 0.00 0.00 0.00 0.00 15.06 7.13 8.61 0.00 0.00 0.00 29 E6_Da KnownBoundary 0 78.38 2.83 146.12 4.93 0.00 2.84 0.00 0.00 7.70 4.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.43 4.80 8.25 0.00 0.00 0.00 30 E6a_E7a KnownJunction 0 3.56 0.00 18.57 0.00 0.00 2.90 0.00 0.00 3.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.24 0.00 0.00 0.00 0.00 31 ER6b ExonRegion 0 60.60 3.34 99.87 4.50 4.67 5.30 4.62 0.00 3.71 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.78 6.29 5.07 0.00 0.00 0.00 32 E6_Db NovelBoundary 0 26.97 3.22 100.23 1.66 0.00 5.11 0.00 0.00 0.00 4.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 4.42 5.75 0.00 0.00 0.00 33 I6 Intron 0 29.34 2.80 74.77 5.59 2.83 6.79 2.94 0.00 1.75 0.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.67 5.63 0.00 0.00 0.00 34 I6_SR1 SilentIntronRegion 0 29.40 2.80 74.92 5.60 2.84 6.81 2.95 0.00 1.76 0.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.68 5.64 0.00 0.00 0.00 35 E7_Aa NovelBoundary 0 73.20 5.59 77.44 5.36 7.30 20.50 6.27 0.00 5.32 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 5.56 0.00 0.00 0.00 36 ER7a ExonRegion 0 55.34 7.47 149.84 3.74 3.29 12.14 7.35 0.00 11.03 1.58 0.59 0.00 0.00 0.00 0.00 0.00 0.00 10.43 10.04 8.51 0.00 0.00 0.00 37 E7_Da NovelBoundary 0 41.56 3.29 128.00 7.46 3.99 7.95 10.20 0.00 7.90 5.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.76 8.38 7.99 0.00 0.00 0.00 38 E7a_E8a KnownJunction 0 0.00 0.00 44.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 39 I7 Intron 0 59.68 7.73 109.02 5.23 4.59 11.92 4.06 0.00 4.96 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.06 8.59 8.35 0.00 0.00 0.00 40 I7_SR1 SilentIntronRegion 0 59.96 7.76 109.54 5.25 4.61 11.97 4.08 0.00 4.99 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.12 8.63 8.39 0.00 0.00 0.00 41 E8_Aa NovelBoundary 0 67.27 0.00 261.17 18.88 4.33 5.39 4.50 0.00 11.37 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.02 12.89 6.20 0.00 0.00 0.00 42 ER8a ExonRegion 0 76.68 7.04 235.91 11.64 6.23 13.96 7.33 0.00 11.24 1.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.81 10.23 9.78 0.00 0.00 0.00 43 IG47 Intergenic 0 10.44 1.34 35.69 1.71 0.90 3.64 0.81 0.86 1.65 0.62 0.00 0.02 0.02 0.00 0.00 0.00 0.00 4.10 0.61 1.08 0.00 0.00 0.00 44 IG47_SR1 SilentIntergenicRegion 0 9.57 0.85 42.83 1.60 0.75 0.95 0.65 0.12 1.45 0.21 0.00 0.02 0.04 0.00 0.00 0.00 0.00 2.90 0.81 1.05 0.00 0.00 0.00 45 IG47_AR1 ActiveIntergenicRegion 0 24.27 0.31 176.59 6.10 1.34 1.93 1.13 0.00 2.42 0.38 0.00 0.00 0.00 0.20 0.00 0.00 0.00 3.48 1.09 5.03 0.00 0.00 0.00 46 IG47_AR2 ActiveIntergenicRegion 0 25.20 0.00 105.50 7.20 0.00 0.00 1.07 0.00 2.47 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 IG47_SR2 SilentIntergenicRegion 0 13.58 0.00 77.73 2.73 0.00 1.22 0.00 0.00 2.37 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 IG47_SR3 SilentIntergenicRegion 0 11.28 1.73 27.07 1.67 0.92 2.97 0.69 1.36 1.63 0.78 0.00 0.02 0.00 0.00 0.00 0.00 0.00 4.56 0.40 0.81 0.00 0.00 0.00 49 IG47_AR3 ActiveIntergenicRegion 0 1.04 5.36 2.60 4.37 5.49 134.76 11.33 10.47 9.58 10.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.15 1.24 10.13 0.00 0.00 0.00