Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC091729.1 Gene 0 21.78 4.41 26.48 21.28 24.19 20.40 13.24 21.41 35.70 14.95 15.22 24.32 26.74 34.67 38.61 23.22 24.41 11.44 19.38 16.98 20.15 9.33 7.10 2 436304 Transcript 0 0.01 0.01 0.00 0.00 0.00 0.34 0.00 0.45 0.00 0.28 0.00 0.00 0.00 0.24 0.86 0.03 0.57 0.00 0.00 0.00 0.08 0.02 0.00 3 423008 Transcript 0 23.45 3.68 14.95 16.38 25.83 31.04 12.53 20.94 26.67 12.43 18.87 25.92 20.38 30.82 43.41 29.95 22.99 17.81 28.67 15.77 25.53 10.71 9.83 4 422230 Transcript 0 0.00 0.00 1.66 0.00 0.00 0.00 0.00 2.18 0.00 1.24 0.00 0.00 0.00 0.00 0.00 7.86 0.00 0.00 0.00 6.26 0.00 0.00 3.84 5 413706 Transcript 0 6.49 1.19 8.95 9.18 8.16 5.72 3.81 5.04 11.05 4.47 6.04 10.51 8.72 14.36 15.92 10.18 5.50 3.10 7.19 5.57 11.21 2.21 2.36 6 ER1a ExonRegion 0 0.03 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.43 0.09 0.00 0.00 0.00 0.00 0.23 0.07 0.00 7 E1_Ab KnownBoundary 0 0.00 3.35 1.36 0.00 3.57 2.33 0.00 1.56 1.33 0.00 2.11 0.00 0.00 4.77 9.89 3.50 0.00 0.00 0.00 0.00 5.68 2.51 0.00 8 ER1b ExonRegion 1 7.12 1.87 1.69 4.29 8.29 12.00 6.45 2.55 4.24 1.81 6.66 0.00 5.71 8.06 23.42 21.16 2.94 8.43 20.27 3.85 11.98 2.39 4.86 9 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.47 4.57 3.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ac KnownBoundary 0 6.59 0.00 8.69 13.29 8.15 23.68 0.00 7.80 18.32 5.75 2.32 0.00 0.00 4.59 14.59 21.70 0.00 24.21 26.54 3.07 11.61 7.04 20.15 12 ER1c ExonRegion 1 23.28 0.00 7.72 18.67 31.31 44.56 17.21 12.44 20.87 8.03 21.65 0.00 7.50 20.46 38.30 71.33 11.55 27.72 85.37 10.64 33.06 11.67 22.91 13 ER1d ExonRegion 0 6.63 1.07 7.42 10.30 5.65 13.40 2.31 14.02 14.59 7.02 3.03 1.34 2.61 13.78 16.87 20.53 13.48 10.46 27.78 8.97 16.02 11.92 12.75 14 E1_Ad KnownBoundary 0 3.78 0.00 3.67 0.00 0.00 0.00 2.21 3.90 11.52 7.12 6.90 12.30 0.00 36.49 17.80 11.19 22.07 1.66 8.09 6.33 33.73 3.12 7.60 15 ER1e ExonRegion 0 3.31 0.25 3.29 2.98 3.51 1.72 2.57 7.13 5.25 6.31 12.68 12.18 0.15 27.56 28.56 19.04 16.20 4.85 8.76 9.84 28.92 5.93 6.61 16 E1b_E3a KnownJunction 0 3.70 0.00 6.98 9.32 4.33 6.98 0.00 6.24 9.78 6.85 11.58 6.30 0.00 32.08 38.32 26.66 4.49 2.49 13.84 5.82 18.22 0.00 3.84 17 E1b_E5a NovelJunction 0 3.48 0.00 5.00 3.66 8.49 0.00 0.00 0.00 8.30 1.50 6.90 0.00 0.00 7.36 4.45 7.18 0.00 4.31 4.80 2.94 9.27 0.00 8.37 18 E1b_E6b KnownJunction 0 0.00 0.00 0.00 1.70 0.00 0.00 2.25 0.00 0.00 3.06 7.69 12.30 0.00 2.24 9.77 0.00 4.30 7.01 0.00 0.00 6.30 8.39 0.00 19 E1b_E7a KnownJunction 0 0.00 0.00 1.66 0.00 0.00 0.00 0.00 2.18 0.00 1.24 0.00 0.00 0.00 0.00 0.00 7.86 0.00 0.00 0.00 6.26 0.00 0.00 3.84 20 ER2a ExonRegion 0 0.00 0.02 0.00 0.00 0.00 0.95 0.00 1.34 0.00 0.83 0.00 0.00 0.00 0.58 2.16 0.00 1.72 0.00 0.00 0.00 0.00 0.00 0.00 21 E3_Aa NovelBoundary 0 16.00 8.49 31.10 21.48 32.77 15.67 9.98 1.81 39.64 8.78 7.53 6.75 0.00 16.25 30.29 28.20 26.74 5.14 7.34 6.01 7.48 0.00 3.33 22 ER3a ExonRegion 0 9.87 4.28 22.93 26.06 18.09 11.89 7.34 15.02 25.15 11.44 10.81 15.65 24.11 28.34 36.16 26.07 16.02 10.97 18.03 17.56 17.48 3.87 8.37 23 E3_Da NovelBoundary 1 61.79 2.89 34.39 32.93 24.87 25.67 29.24 18.57 40.97 7.63 22.27 7.65 20.45 59.10 63.91 84.93 31.51 17.82 22.40 24.86 11.43 8.82 0.00 24 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.38 1.50 1.67 5.00 11.55 6.82 2.47 10.63 3.76 4.49 0.00 8.28 3.07 3.15 0.00 0.00 25 E3a_E6b NovelJunction 0 0.00 0.00 0.00 5.69 8.23 4.83 0.00 6.82 3.30 4.81 4.63 0.00 0.00 14.60 4.45 0.00 4.30 0.00 0.00 0.00 0.00 2.69 0.00 26 E4_Aa NovelBoundary 0 57.12 42.69 39.56 44.28 20.03 15.45 39.39 71.14 41.55 30.25 20.06 19.21 7.47 22.13 39.31 71.95 34.60 38.84 26.54 27.87 55.97 30.19 61.97 27 ER4a ExonRegion 0 2.60 0.00 1.06 0.25 0.36 0.63 0.69 1.89 1.88 1.09 3.91 16.04 7.14 7.46 5.60 3.44 1.50 0.17 1.95 1.21 7.96 0.71 0.00 28 E4_Da NovelBoundary 0 31.56 2.76 26.52 15.48 18.68 10.05 7.99 18.48 20.17 7.04 9.90 20.41 20.29 36.44 60.20 26.40 26.27 8.66 7.72 17.07 18.59 2.57 0.00 29 E4a_E5a KnownJunction 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 2.55 1.50 0.00 0.00 5.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.68 2.82 0.00 30 E5_Aa NovelBoundary 0 21.78 3.29 21.08 21.91 16.21 10.11 22.70 14.42 17.79 4.19 7.16 6.00 20.45 24.25 5.19 12.65 0.00 4.19 0.00 0.00 7.35 5.76 0.00 31 ER5a ExonRegion 0 13.89 2.43 27.84 20.20 23.38 16.31 12.03 5.84 30.75 7.81 11.15 10.77 23.18 25.59 26.88 11.87 9.21 5.62 10.14 10.56 19.83 3.74 1.14 32 E5_Da NovelBoundary 0 17.63 6.12 21.55 27.80 15.70 14.25 5.52 10.84 24.59 7.33 7.69 25.06 13.64 24.02 0.00 12.30 13.56 4.68 4.05 17.64 5.68 3.12 0.00 33 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 34 E6_Aa NovelBoundary 0 30.75 3.35 16.97 29.37 35.14 2.44 22.79 14.83 22.71 7.92 0.00 6.15 6.82 17.54 10.75 16.58 4.77 4.23 26.35 9.08 2.84 5.63 0.00 35 ER6a ExonRegion 0 18.91 2.83 12.82 17.64 19.14 9.92 10.44 6.41 17.83 6.86 5.87 18.03 8.53 16.45 9.79 9.62 8.31 5.54 5.30 6.38 11.38 3.62 5.53 36 E6_Ab KnownBoundary 0 43.12 0.00 13.39 22.27 29.54 5.17 10.47 9.00 18.32 7.92 6.69 12.60 20.45 21.90 10.63 0.00 4.68 8.42 4.80 3.26 12.36 0.00 8.02 37 ER6b ExonRegion 0 25.56 3.49 8.29 16.60 33.69 24.92 11.71 10.37 18.02 10.23 18.54 36.63 36.44 36.90 29.16 18.06 18.45 13.98 10.13 13.26 21.02 9.78 10.92 38 E6_Db NovelBoundary 0 3.41 0.00 4.82 5.06 3.40 0.00 0.00 0.00 6.11 1.58 0.00 0.00 0.00 0.00 0.00 0.00 3.65 5.14 13.08 5.50 0.00 0.00 4.35 39 E6b_E7a KnownJunction 0 33.86 5.85 11.62 14.38 27.76 43.10 10.07 26.94 25.52 12.30 21.64 30.91 13.64 36.55 53.28 15.64 28.52 16.17 13.18 20.01 29.59 7.78 4.18 40 ER6c ExonRegion 0 23.28 4.07 12.56 13.63 29.43 31.17 11.58 20.74 18.53 9.18 19.33 47.62 28.14 37.35 47.15 26.75 26.41 18.48 15.93 19.15 27.55 7.81 11.01 41 E7_Aa NovelBoundary 0 13.34 3.35 11.15 21.38 3.48 5.62 23.80 4.07 17.97 0.00 2.63 0.00 0.00 9.77 4.45 0.00 4.21 10.69 0.00 3.26 0.00 0.00 3.50 42 ER7a ExonRegion 0 41.76 6.51 49.89 34.54 39.03 31.05 24.45 33.26 53.67 22.80 29.91 53.30 35.52 62.53 59.54 39.00 47.02 17.47 34.20 29.68 30.32 14.89 10.93 43 E7_Da KnownBoundary 0 103.87 18.81 44.79 54.41 35.65 60.65 17.80 42.84 79.57 28.45 38.96 37.51 72.07 66.46 73.06 20.34 30.48 21.35 43.86 25.38 31.07 3.12 0.00 44 ER7b ExonRegion 0 36.82 8.47 42.87 33.51 40.65 36.34 21.54 44.56 68.41 29.57 24.06 38.76 52.63 57.49 68.57 36.01 44.18 19.66 28.90 29.05 31.18 17.88 11.05 45 IG18_AR1 ActiveIntergenicRegion 0 6.71 1.47 12.34 17.61 11.69 5.83 9.31 24.19 17.06 2.96 4.52 5.28 2.79 2.10 2.41 1.08 4.45 3.20 12.09 7.29 3.91 0.00 0.00 46 IG18_AR2 ActiveIntergenicRegion 0 4.40 1.31 10.06 8.03 4.59 1.37 6.22 10.57 14.78 4.61 2.66 5.15 0.80 1.14 1.03 2.60 11.56 3.81 3.17 4.94 1.75 0.62 0.61