Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TOMM7 Gene 0 132.09 198.74 514.97 648.95 261.11 379.32 99.56 128.43 102.11 164.78 281.09 44.07 37.44 209.74 402.02 304.55 221.47 120.01 381.21 153.65 407.55 249.23 315.61 2 358435 Transcript 0 2.12 0.00 0.00 0.00 2.68 3.67 2.65 0.00 0.00 0.00 4.51 0.00 0.00 0.54 0.00 0.99 0.00 1.85 0.00 0.00 0.00 2.08 0.00 3 463284 Transcript 0 0.00 0.00 56.56 8.72 0.00 0.00 0.00 9.98 10.47 6.21 42.01 6.30 0.00 2.41 9.15 4.36 27.58 2.07 21.46 24.93 80.00 0.00 0.00 4 396557 Transcript 0 0.00 0.63 16.87 15.83 0.00 0.00 0.00 1.73 2.95 6.35 11.00 0.00 0.00 3.87 10.94 4.57 7.36 1.14 6.62 2.62 13.73 2.40 3.16 5 496129 Transcript 0 8.40 6.50 6.92 17.71 13.84 9.15 8.11 4.95 7.46 8.44 1.83 2.74 9.92 2.06 4.17 10.35 4.33 2.79 7.41 8.47 2.60 10.31 2.91 6 372879 Transcript 0 1.58 2.78 3.53 4.81 2.33 3.17 3.80 1.60 0.46 3.06 3.62 4.55 3.29 4.69 6.83 2.62 1.64 0.65 1.46 2.63 1.64 2.43 0.74 7 405021 Transcript 0 4.56 16.30 19.99 26.53 6.57 38.19 8.06 9.19 4.84 4.61 9.42 1.90 0.52 4.94 9.74 9.97 2.26 4.30 7.89 10.95 4.97 5.14 4.74 8 483581 Transcript 0 7.64 5.35 17.96 18.57 7.94 6.25 7.33 5.49 6.18 5.63 10.47 8.00 15.08 5.46 11.30 3.10 9.38 1.47 5.40 8.55 16.93 6.33 5.07 9 IG40_AR4 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.83 3.37 15.37 26.68 5.80 11.12 6.24 0.00 0.00 0.00 0.00 3.90 2.77 10 IG40_SR6 SilentIntergenicRegion 0 9.50 0.47 1.16 2.26 10.94 4.30 4.22 2.72 8.19 1.43 16.72 104.69 42.56 63.67 39.03 49.63 30.99 0.00 0.00 0.00 3.42 39.75 39.32 11 IG40_AR3 ActiveIntergenicRegion 0 5.08 0.79 1.06 1.13 3.68 0.97 0.47 0.96 3.25 0.08 9.22 20.88 12.64 40.11 18.32 38.58 18.16 0.00 0.00 0.00 2.74 15.65 30.64 12 ER1a ExonRegion 0 2.12 0.00 0.00 0.00 2.68 3.67 2.65 0.00 0.00 0.00 4.51 0.00 0.00 0.54 0.00 0.99 0.00 1.85 0.00 0.00 0.00 2.08 0.00 13 ER1b ExonRegion 0 2.12 0.00 0.61 0.00 6.02 11.46 2.65 0.00 0.00 0.00 5.80 0.00 0.00 7.71 1.45 2.97 0.00 1.85 0.00 1.06 0.00 2.08 0.73 14 ER1c ExonRegion 1 1592.16 1303.58 1525.24 2107.72 1359.66 2831.12 555.16 337.54 273.45 401.84 1050.94 7.05 1.88 1204.49 2095.20 1153.35 885.58 303.98 1096.40 519.03 2046.30 694.35 1542.41 15 E1_Ad KnownBoundary 1 4306.39 3118.66 236.54 460.65 3943.47 7004.26 1381.90 54.75 59.55 57.14 2195.92 24.01 0.00 2540.60 4260.84 2263.68 1856.19 250.54 2121.10 1084.10 4054.45 1181.19 3223.99 16 E1_Ae KnownBoundary 1 1123.24 1985.57 4238.88 6041.69 1602.63 2190.90 558.22 989.60 766.40 1158.18 1436.10 63.17 12.66 1188.01 2612.53 2253.43 1290.04 867.08 2358.00 678.86 2288.30 1605.48 2235.15 17 ER1d ExonRegion 1 2743.45 2805.70 3001.19 4218.77 2760.10 5268.99 1106.27 702.93 559.57 842.91 2329.45 33.27 11.35 2447.29 4113.82 2801.31 2051.59 713.81 2746.79 1152.07 4294.45 1870.01 3287.03 18 ER1e ExonRegion 0 366.45 838.17 2389.22 2785.41 724.56 997.30 406.85 619.36 494.56 818.86 1249.74 174.36 91.83 541.69 1235.65 1100.68 1043.11 567.78 1570.05 670.23 2015.95 743.34 1062.29 19 E1a_E3b KnownJunction 1 28.38 67.29 2357.49 1899.06 96.77 38.16 16.47 463.81 498.23 859.21 2508.21 152.30 115.74 357.59 630.20 153.29 2060.03 109.98 264.95 465.96 4219.09 187.13 166.46 20 E1a_E5a KnownJunction 0 0.00 0.00 56.56 8.72 0.00 0.00 0.00 9.98 10.47 6.21 42.01 6.30 0.00 2.41 9.15 4.36 27.58 2.07 21.46 24.93 80.00 0.00 0.00 21 ER2a ExonRegion 0 5.80 10.75 20.79 31.29 4.90 22.77 5.17 11.64 8.38 6.09 7.04 3.81 1.03 7.40 15.04 19.95 4.53 8.59 11.74 13.09 7.34 5.38 9.49 22 E2a_E3b KnownJunction 0 3.33 21.84 19.19 21.78 8.23 53.61 10.95 6.74 1.30 3.12 11.79 0.00 0.00 2.47 4.45 0.00 0.00 0.00 4.05 8.82 2.59 4.90 0.00 23 I2_AR1 ActiveIntronRegion 0 16.72 29.03 13.44 20.91 13.48 5.66 14.66 11.34 7.83 9.57 3.05 14.58 13.36 5.36 11.05 7.95 8.36 5.02 3.40 10.40 5.99 10.68 9.41 24 E3_Aa NovelBoundary 0 216.93 200.03 141.66 129.39 140.49 75.52 227.08 99.28 88.08 110.62 67.23 33.01 43.02 27.84 44.13 179.61 126.32 128.51 147.86 163.37 65.98 63.62 134.87 25 ER3a ExonRegion 0 7.64 5.35 17.96 18.57 7.94 6.25 7.33 5.49 6.18 5.63 10.47 8.00 15.08 5.46 11.30 3.10 9.38 1.47 5.40 8.55 16.93 6.33 5.07 26 E3_Ab KnownBoundary 0 9.85 0.00 11.59 7.26 8.06 2.90 7.73 11.05 7.47 4.30 4.90 6.30 0.00 2.18 4.45 0.00 8.51 2.36 4.61 0.00 6.30 10.72 0.00 27 ER3b ExonRegion 1 19.58 82.87 3415.82 4124.43 64.83 45.88 23.64 861.27 683.30 1236.41 2623.75 209.08 98.20 1598.57 2234.09 1146.00 1913.76 495.47 1491.68 959.44 3521.48 1208.88 1313.11 28 E3_Da KnownBoundary 0 3.11 9.87 9.61 11.55 12.05 4.66 6.62 4.39 3.12 11.01 7.21 0.00 0.00 4.94 5.07 0.00 13.93 2.36 8.66 14.45 2.47 5.51 8.45 29 E3a_E4a KnownJunction 0 0.00 0.00 1.12 0.00 0.00 0.00 0.00 0.00 0.00 2.69 2.32 0.00 0.00 7.30 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E3a_E5a KnownJunction 0 15.63 90.71 4029.69 5999.84 47.20 32.94 4.06 1086.78 713.36 1308.93 1755.66 314.65 176.94 3371.96 5294.78 2533.95 1310.89 834.37 3117.74 1385.09 1816.13 2828.38 2837.90 31 ER3c ExonRegion 0 8.40 6.50 6.92 17.71 13.84 9.15 8.11 4.95 7.46 8.44 1.83 2.74 9.92 2.06 4.17 10.35 4.33 2.79 7.41 8.47 2.60 10.31 2.91 32 ER4a ExonRegion 0 4.73 8.33 3.81 7.33 6.99 9.50 9.20 4.79 1.38 6.50 6.29 13.65 9.86 6.78 16.05 4.60 4.92 1.94 0.42 7.89 4.92 4.65 2.21 33 E4a_E5a KnownJunction 0 0.00 0.00 5.65 7.09 0.00 0.00 2.21 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 3.25 0.00 0.00 3.95 0.00 0.00 2.63 0.00 34 I4_AR3 ActiveIntronRegion 0 31.13 18.97 14.54 19.28 24.13 6.82 12.46 6.15 4.86 6.08 1.74 2.67 2.98 2.66 7.53 4.38 3.21 1.02 1.95 4.44 2.16 8.23 5.14 35 ER5a ExonRegion 1 336.61 651.41 1567.40 2044.74 1216.02 1567.50 363.92 375.15 289.02 450.86 629.47 186.86 187.60 627.09 1364.54 1162.00 466.90 436.81 1479.53 444.86 705.15 1051.05 1143.22 36 E5_Da KnownBoundary 0 9.63 9.14 10.67 21.51 7.98 12.44 2.08 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.56 0.00 2.78 2.39 3.33 37 E5_Db KnownBoundary 0 14.67 2.89 20.43 13.19 0.00 0.00 0.00 0.00 0.00 3.55 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 3.67 38 ER5b ExonRegion 0 86.78 171.84 74.13 92.68 28.10 36.68 36.41 6.91 19.14 21.22 44.46 12.99 7.04 26.80 34.82 23.78 16.50 8.31 33.45 25.53 35.26 13.54 17.62 39 ER5c ExonRegion 0 2.95 5.65 13.66 22.01 4.22 4.46 2.54 1.96 2.59 5.17 0.89 1.09 1.74 0.37 1.56 0.92 0.01 0.30 4.86 4.59 0.08 2.67 4.15 40 ER6a ExonRegion 0 0.00 0.63 16.87 15.83 0.00 0.00 0.00 1.73 2.95 6.35 11.00 0.00 0.00 3.87 10.94 4.57 7.36 1.14 6.62 2.62 13.73 2.40 3.16