Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	NDUFA4	Gene	0	75.47	145.86	256.01	177.80	221.55	414.42	171.24	125.57	94.29	96.48	294.24	93.77	31.21	260.30	320.04	250.77	271.51	89.59	119.83	120.14	121.30	188.53	135.33
2	339600	Transcript	0	156.99	272.78	116.40	115.01	239.56	588.78	244.05	49.83	36.82	41.07	315.46	18.34	13.88	308.24	359.14	250.04	271.25	77.80	114.77	111.80	152.59	110.32	127.27
3	492822	Transcript	0	3.13	5.16	4.18	5.63	10.05	8.96	4.73	3.38	3.80	5.44	9.38	7.55	5.54	4.87	1.74	3.87	4.81	1.24	3.19	5.80	1.73	2.51	2.64
4	486007	Transcript	0	18.39	11.14	4.85	9.27	18.87	29.61	15.45	12.53	10.83	10.46	7.44	13.84	16.53	10.60	0.94	4.70	3.64	3.65	2.97	7.30	1.01	9.42	1.34
5	470761	Transcript	0	4.21	8.79	5.40	6.28	7.21	10.01	6.04	3.82	7.35	4.63	6.18	5.66	1.69	4.95	1.65	5.88	3.27	4.73	6.31	6.15	4.23	2.83	4.93
6	463308	Transcript	0	10.91	11.08	13.13	15.59	32.97	16.88	20.81	18.51	10.55	12.62	28.61	28.59	12.24	13.71	11.57	10.76	28.21	5.16	3.35	11.29	9.97	10.12	5.93
7	482299	Transcript	1	4.80	7.53	16.04	18.67	18.38	11.00	9.00	12.09	10.43	10.56	10.48	24.47	11.29	15.81	13.21	12.95	11.17	4.71	6.95	8.83	3.08	13.83	9.79
8	ER1a	ExonRegion	0	274.05	516.15	201.10	197.33	456.98	1158.96	471.93	79.21	59.49	65.99	614.44	1.77	13.38	598.45	682.56	486.92	529.82	151.62	221.49	206.68	300.90	204.15	247.88
9	E1_Ab	KnownBoundary	1	2289.22	3938.90	1221.33	1191.66	3518.93	8428.56	3584.60	500.16	343.57	371.77	3969.22	19.06	54.38	3969.35	4341.81	3263.33	3444.97	1183.00	1481.55	1427.97	1922.82	1361.22	1692.07
10	ER1b	ExonRegion	1	1210.87	2325.65	1590.64	1384.64	2757.12	7608.66	3057.26	683.94	532.07	518.79	2694.08	52.88	48.99	3771.15	3461.45	3706.03	2835.06	858.77	1478.52	1118.73	1402.23	1847.86	2077.88
11	E1_Ac	KnownBoundary	1	1157.83	1275.04	1545.19	1241.00	3093.55	5636.87	1850.99	767.76	601.90	544.46	1554.03	165.50	51.13	3400.04	4017.81	3606.23	2617.95	638.42	1303.19	945.91	779.94	2104.35	2200.75
12	ER1c	ExonRegion	0	464.12	551.10	1486.74	856.15	2248.05	2415.43	696.63	731.30	555.14	535.42	1633.91	281.76	139.44	954.60	1363.50	1418.03	2107.07	486.10	645.52	645.89	991.53	738.09	851.11
13	E1_Da	KnownBoundary	0	7.48	6.18	8.78	3.10	15.62	0.00	1.90	0.00	1.59	10.88	18.11	0.00	0.00	2.47	0.00	0.00	4.02	1.70	0.00	8.63	0.00	0.00	0.00
14	E1a_E3b	KnownJunction	1	244.41	268.37	1744.17	766.00	600.51	388.13	111.33	786.20	555.14	592.90	2508.95	285.69	85.55	664.43	847.52	470.82	2495.74	374.12	293.84	573.98	1593.24	336.05	176.70
15	ER1d	ExonRegion	0	1.59	1.89	3.41	0.80	4.87	2.95	0.33	0.03	0.53	6.88	14.32	0.00	0.00	3.07	0.10	0.48	5.07	0.00	5.01	8.78	3.97	0.00	2.52
16	E1b_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER2a	ExonRegion	0	8.42	14.23	7.82	10.59	14.42	17.76	12.07	7.63	10.24	9.25	12.37	5.93	3.38	9.89	3.30	11.76	6.55	9.45	12.62	12.31	5.32	5.65	5.60
18	E2_Ab	KnownBoundary	0	17.71	21.71	12.80	11.09	18.85	27.82	16.08	11.42	17.04	6.77	9.27	12.45	0.00	27.02	8.90	6.66	13.37	7.13	3.76	25.63	11.24	11.02	4.18
19	ER2b	ExonRegion	0	7.43	13.07	15.42	9.89	18.45	33.09	15.01	10.87	10.85	7.70	10.86	5.62	12.32	12.73	4.75	10.05	18.89	7.27	8.20	15.12	4.99	6.47	14.71
20	E2_Da	KnownBoundary	0	9.41	9.21	8.19	17.48	27.08	29.13	9.89	8.91	7.87	9.51	9.16	0.00	13.64	9.65	14.59	22.30	8.13	4.89	7.15	9.33	5.62	0.00	12.89
21	E2a_E3b	KnownJunction	0	0.00	3.35	2.99	1.96	0.00	2.27	0.00	0.00	4.46	0.00	0.00	5.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.15	0.00	4.27
22	ER2c	ExonRegion	0	7.81	13.59	9.13	16.10	25.28	23.95	13.85	10.10	10.88	9.44	13.82	22.65	16.63	11.52	5.11	11.14	9.37	3.71	4.56	8.63	1.21	7.52	5.42
23	E2_Db	NovelBoundary	1	3.41	9.60	1.09	24.27	24.79	14.08	23.89	15.77	16.52	11.44	2.11	48.02	15.10	4.94	5.19	0.00	12.53	0.00	3.58	6.33	0.00	5.51	3.67
24	I2	Intron	0	4.69	12.88	3.46	9.01	18.65	12.78	13.42	8.16	7.00	7.04	11.02	31.62	6.99	6.20	5.19	6.59	4.18	1.17	1.01	2.70	0.00	4.62	3.72
25	I2_SR1	SilentIntronRegion	0	4.75	13.05	3.50	9.12	18.85	12.94	13.58	8.26	7.08	7.13	11.16	32.02	7.08	6.27	5.24	6.67	4.24	1.19	1.02	2.73	0.00	4.68	3.77
26	E3_Aa	NovelBoundary	0	6.82	15.59	0.00	19.98	21.22	30.95	14.79	23.17	19.10	9.40	6.69	0.00	19.97	14.66	10.75	7.78	4.39	0.00	0.00	12.21	0.00	9.00	3.33
27	ER3a	ExonRegion	0	10.91	11.08	13.13	15.59	32.97	16.88	20.81	18.51	10.55	12.62	28.61	28.59	12.24	13.71	11.57	10.76	28.21	5.16	3.35	11.29	9.97	10.12	5.93
28	E3_Ab	KnownBoundary	0	22.30	21.64	8.40	15.95	45.84	10.45	25.44	19.02	15.36	7.15	8.90	0.00	13.47	17.36	11.37	13.59	8.70	2.07	4.80	22.88	0.00	8.45	4.35
29	ER3b	ExonRegion	1	67.78	324.96	2099.41	1392.74	214.79	236.44	139.56	925.63	712.63	739.53	3178.70	632.30	130.47	2757.92	2922.78	1784.26	2987.42	855.93	1079.01	1147.34	1459.51	1334.57	931.85
30	E3a_E4b	KnownJunction	0	25.78	267.06	2763.89	2017.99	361.12	376.77	269.79	1277.61	971.49	976.57	3020.55	586.84	186.68	4216.57	4966.20	4843.17	3465.07	1497.13	2424.63	1435.26	1187.24	2431.83	2844.21
31	E4_Aa	NovelBoundary	1	6.82	25.46	12.77	23.71	27.76	28.73	15.06	12.61	11.69	9.48	4.37	23.86	39.61	9.48	0.00	0.00	8.32	3.90	0.00	20.90	0.00	8.14	16.22
32	ER4a	ExonRegion	1	4.80	7.53	16.04	18.67	18.38	11.00	9.00	12.09	10.43	10.56	10.48	24.47	11.29	15.81	13.21	12.95	11.17	4.71	6.95	8.83	3.08	13.83	9.79
33	E4_Ab	KnownBoundary	0	14.97	8.22	13.54	15.88	12.31	23.57	19.83	17.29	4.60	13.48	9.32	25.51	6.82	7.18	0.00	4.36	7.95	2.03	0.00	6.39	0.00	6.06	0.00
34	ER4b	ExonRegion	0	22.74	159.85	2522.55	1621.04	549.21	560.12	208.54	1235.84	876.93	905.01	2330.54	450.16	125.76	3535.59	4065.60	4076.03	2651.69	1413.87	1708.39	1063.48	956.97	2109.73	2328.07
35	E4_Da	KnownBoundary	0	22.30	94.33	1585.01	922.26	459.85	357.18	93.27	796.26	513.07	569.23	1048.84	308.05	93.50	844.61	1499.11	1599.92	1031.79	705.33	509.29	558.96	435.04	1103.00	745.82
36	E4_Db	KnownBoundary	0	0.00	0.00	0.00	1.90	7.64	8.23	10.69	15.28	6.28	6.34	0.00	0.00	0.00	4.83	0.00	3.59	3.74	8.87	9.60	0.00	0.00	6.18	0.00
37	E4b_E5a	KnownJunction	0	61.20	224.17	2278.93	1327.80	2143.46	2421.84	621.46	1156.81	787.41	787.24	1855.68	689.02	222.55	834.84	1816.80	2314.52	1358.48	1034.26	698.47	1033.86	590.22	794.99	1239.39
38	ER4c	ExonRegion	0	19.65	161.52	2285.32	1334.56	1420.44	1699.67	409.10	1170.16	791.36	829.46	1860.69	614.47	166.83	1057.77	2130.56	2332.06	1486.58	1082.78	750.61	935.10	623.33	1162.75	1199.20
39	ER4d	ExonRegion	0	18.39	11.14	4.85	9.27	18.87	29.61	15.45	12.53	10.83	10.46	7.44	13.84	16.53	10.60	0.94	4.70	3.64	3.65	2.97	7.30	1.01	9.42	1.34
40	E4_Dc	NovelBoundary	1	3.78	9.08	2.63	23.77	37.27	8.69	16.83	16.68	13.51	12.92	9.84	31.51	52.43	28.14	13.35	0.00	0.00	0.00	3.95	14.51	2.53	31.41	0.00
41	I4	Intron	0	14.10	16.16	10.68	16.14	27.11	20.27	17.38	14.45	9.82	9.99	7.41	22.52	14.62	9.50	5.90	5.73	4.67	1.99	3.21	7.25	2.03	7.19	2.70
42	I4_AR2	ActiveIntronRegion	0	5.06	11.33	6.91	15.26	28.98	21.57	15.93	19.49	14.68	12.66	10.76	26.17	12.41	12.66	4.00	6.13	13.04	3.14	3.28	9.12	2.09	6.81	3.87
43	I4_AR3	ActiveIntronRegion	0	3.24	20.72	4.10	19.00	28.01	44.76	22.26	23.44	21.00	16.38	6.89	20.43	24.48	12.38	5.26	0.74	7.53	3.41	9.56	10.04	2.07	4.23	2.94
44	I4_AR4	ActiveIntronRegion	0	6.96	9.15	0.79	7.41	13.64	30.55	10.74	8.92	7.37	9.53	5.05	12.01	20.20	7.33	1.73	2.49	3.46	2.32	1.39	7.14	2.59	12.00	0.38
45	I4_AR5	ActiveIntronRegion	1	6.61	2.03	2.30	7.38	8.81	26.21	8.27	3.89	6.69	7.26	6.12	38.97	21.11	13.33	5.80	5.94	4.95	0.00	1.59	6.21	3.12	4.17	0.86
46	I4_AR6	ActiveIntronRegion	0	11.05	7.60	12.75	13.13	27.30	30.09	20.93	18.67	20.92	11.74	17.69	35.55	26.76	13.09	3.98	11.30	7.86	2.58	5.51	13.29	3.00	10.65	5.13
47	I4_SR2	SilentIntronRegion	0	14.58	22.39	8.95	14.71	27.56	14.33	14.48	8.96	4.97	7.53	3.02	21.42	9.27	8.09	4.70	5.28	2.11	1.11	3.39	5.74	0.63	7.25	2.09
48	I4_AR9	ActiveIntronRegion	0	20.42	20.91	18.63	26.98	38.72	24.08	24.39	21.59	9.90	13.24	5.34	20.38	15.44	7.51	11.31	2.12	1.83	0.66	1.51	6.90	1.05	6.42	2.09
49	E5_Aa	NovelBoundary	0	20.30	2.57	21.50	11.09	48.64	15.90	17.05	45.14	8.83	17.38	13.11	12.60	6.82	7.18	6.06	0.00	8.60	0.00	0.00	3.00	3.09	2.51	0.00
50	ER5a	ExonRegion	0	14.74	198.49	2075.12	1257.26	2070.65	3249.56	1095.72	1068.86	722.45	722.26	1651.25	780.23	251.25	769.14	1549.68	1578.52	1024.46	895.89	533.66	836.09	451.68	691.43	864.95
51	ER5b	ExonRegion	0	367.85	1238.71	1699.74	1065.57	1680.37	3583.29	1566.25	824.22	632.22	646.07	1471.75	848.49	216.30	697.29	1361.81	608.04	982.54	209.69	400.59	500.10	338.46	1419.90	254.55
52	E5_Db	KnownBoundary	1	539.73	364.01	1525.91	1189.73	199.66	204.43	147.77	720.89	471.75	560.58	531.24	551.43	163.46	251.69	597.81	157.91	245.07	64.96	82.54	250.87	47.14	517.73	67.95
53	ER5c	ExonRegion	0	39.92	29.41	31.69	32.68	22.13	18.59	16.18	20.46	14.16	16.14	16.49	34.90	14.38	18.03	35.72	13.17	12.68	3.97	8.05	16.91	4.28	16.48	6.67