Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MACC1 Gene 0 2.08 0.71 0.72 0.71 2.05 1.25 2.03 0.80 0.97 0.59 42.41 163.96 207.57 229.13 78.18 71.90 123.72 0.59 1.43 0.83 0.47 0.72 0.74 2 332878 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.95 0.00 3.08 37.15 13.18 20.24 29.59 0.00 0.00 0.00 0.00 0.00 0.29 3 400331 Transcript 0 0.90 0.32 0.28 0.29 2.94 0.43 0.95 0.85 0.73 0.26 22.29 74.83 79.11 87.26 33.29 38.46 76.39 0.26 0.61 0.39 0.21 0.83 0.28 4 471019 Transcript 0 0.49 0.00 0.00 0.00 1.50 0.00 1.55 0.30 0.00 0.00 16.97 9.59 13.70 53.50 13.69 21.79 57.76 0.00 0.00 0.00 0.00 0.00 0.00 5 483317 Transcript 0 2.34 0.00 0.00 0.00 0.00 0.48 0.07 0.00 0.64 0.00 10.83 33.43 44.75 31.17 6.20 19.98 51.50 0.00 0.00 0.00 0.00 0.00 0.00 6 IG16 Intergenic 0 2.51 0.00 0.00 0.00 0.00 2.17 1.57 0.00 0.00 0.00 4.59 4.46 9.16 18.10 7.03 5.29 15.66 0.00 0.00 0.00 0.00 0.00 0.87 7 IG16_SR1 SilentIntergenicRegion 0 2.53 0.00 0.00 0.00 0.00 2.20 1.59 0.00 0.00 0.00 4.64 4.51 9.27 18.31 7.12 5.33 15.81 0.00 0.00 0.00 0.00 0.00 0.88 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.64 0.00 0.00 16.67 6.58 12.88 6.82 0.00 0.00 0.00 0.00 0.00 0.59 9 ER1b ExonRegion 0 2.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 0.00 31.10 2.89 13.08 96.51 28.92 59.62 71.72 0.00 0.00 0.00 0.00 0.32 2.94 10 E1_Ac KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.16 6.00 0.00 51.68 5.69 41.53 34.69 0.00 0.00 0.00 0.00 0.00 4.01 11 E1_Ad KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.92 0.00 46.96 0.00 8.28 74.52 14.59 107.41 132.96 0.00 0.00 0.00 0.00 2.45 0.00 12 ER1c ExonRegion 1 4.23 0.00 0.00 0.00 0.00 1.10 0.00 0.00 2.47 0.00 62.24 4.33 23.45 145.52 29.01 126.02 165.70 0.00 0.00 0.00 0.00 2.08 2.94 13 ER1d ExonRegion 0 2.92 0.00 0.00 0.00 3.53 1.66 1.65 0.00 2.28 0.00 72.47 33.33 19.20 263.97 64.27 136.49 245.76 0.00 0.00 0.00 0.00 2.08 0.55 14 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 4.16 0.00 4.33 0.00 0.00 0.00 29.48 0.00 6.82 124.20 26.45 45.12 105.94 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E3a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.27 0.00 16.85 12.60 31.33 48.91 4.82 31.19 84.99 0.00 0.00 0.00 0.00 0.00 0.00 16 E1a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 3.82 0.00 0.00 0.00 0.00 0.00 7.11 18.91 12.17 12.18 0.00 12.05 47.97 0.00 0.00 0.00 0.00 2.63 0.00 17 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.27 0.00 6.17 57.63 19.78 27.60 52.36 0.00 0.00 0.00 0.00 0.00 0.00 18 I1_AR4 ActiveIntronRegion 0 0.27 0.00 0.00 0.12 0.00 0.00 0.34 0.00 0.00 0.00 0.77 28.57 48.87 3.03 6.98 2.64 12.96 0.00 0.00 0.00 0.00 0.00 0.00 19 I1_AR6 ActiveIntronRegion 1 3.53 0.00 0.00 0.31 0.00 0.28 1.30 0.39 0.00 0.00 0.72 15.78 39.03 8.18 24.41 9.81 17.80 0.00 0.00 0.00 0.33 0.00 0.00 20 ER2a ExonRegion 0 1.48 0.00 0.00 0.00 0.33 0.00 0.33 0.90 0.00 0.00 19.22 28.76 26.82 26.42 8.92 16.49 54.89 0.00 0.00 0.00 0.00 0.00 0.00 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 7.47 9.89 5.69 3.76 12.44 0.00 0.00 0.00 0.00 0.00 0.00 22 E2a_E5a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.47 12.45 6.82 47.97 8.90 36.66 22.91 0.00 0.00 0.00 0.00 0.00 0.00 23 I2_AR6 ActiveIntronRegion 0 3.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.40 41.56 35.54 22.61 9.06 14.04 9.79 0.00 0.00 0.00 0.00 0.00 0.00 24 I2_SR5 SilentIntronRegion 0 1.17 0.00 0.00 0.03 0.60 0.09 0.43 0.08 0.09 0.00 1.73 29.03 47.88 11.77 8.66 6.21 10.98 0.00 0.05 0.03 0.00 0.03 0.00 25 I2_AR7 ActiveIntronRegion 0 0.26 0.00 0.00 0.00 0.00 0.23 0.49 0.00 0.00 0.00 4.48 23.32 49.72 11.24 8.72 4.66 8.83 0.00 0.00 0.00 0.00 0.00 0.00 26 ER3a ExonRegion 1 2.12 0.00 0.00 0.00 0.67 0.00 0.00 0.00 0.31 0.00 27.06 32.47 31.66 82.83 11.61 42.35 96.55 0.00 0.00 0.00 0.00 0.52 0.00 27 ER3b ExonRegion 0 3.94 0.00 0.00 0.00 0.54 0.00 1.06 0.00 0.17 0.00 26.64 80.03 88.96 98.51 26.02 42.96 103.41 0.00 0.00 0.00 0.00 1.24 0.00 28 E3_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.32 17.71 47.40 15.42 5.07 8.37 17.20 0.00 0.00 0.00 0.00 0.00 0.00 29 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.90 38.11 32.95 51.80 4.45 23.16 62.55 0.00 0.00 0.00 0.00 0.00 0.00 30 E3a_E5a NovelJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 1.68 1.79 0.00 29.06 74.72 116.55 80.99 14.83 45.97 63.58 0.00 0.00 0.00 0.00 0.00 0.00 31 ER3c ExonRegion 0 0.91 0.00 0.00 0.00 0.00 0.96 0.14 0.00 0.00 0.00 4.82 54.26 58.16 13.43 7.58 8.77 18.01 0.00 0.00 0.00 0.00 0.00 0.00 32 E3_Db NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.90 106.38 53.08 14.60 14.34 3.93 7.95 0.00 0.00 0.00 0.00 0.00 0.00 33 I3 Intron 0 0.26 0.00 0.00 0.06 0.08 0.06 0.31 0.00 0.06 0.03 3.08 27.00 44.81 16.89 6.58 9.98 13.56 0.00 0.00 0.03 0.00 0.00 0.00 34 I3_SR1 SilentIntronRegion 0 0.26 0.00 0.00 0.06 0.08 0.06 0.31 0.00 0.06 0.03 3.08 27.01 44.82 16.89 6.58 9.99 13.56 0.00 0.00 0.03 0.00 0.00 0.00 35 E4_Da NovelBoundary 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.48 75.17 103.24 67.10 4.45 11.19 59.93 0.00 0.00 0.00 0.00 0.00 0.00 36 ER4a ExonRegion 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.64 46.23 73.07 50.40 6.36 14.48 65.59 0.00 0.00 0.00 0.00 0.00 0.00 37 ER4b ExonRegion 0 0.96 0.00 0.00 0.00 0.88 0.00 1.20 0.28 1.66 0.00 21.42 102.30 94.76 96.27 21.80 34.56 87.02 0.00 0.00 0.00 0.00 0.00 0.00 38 E4b_E5a KnownJunction 1 0.00 0.00 0.00 0.00 4.33 0.00 0.00 2.01 0.00 0.00 33.17 80.58 81.49 71.87 31.28 55.97 93.13 0.00 0.00 0.00 0.00 0.00 0.00 39 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 3.61 0.00 0.55 1.35 2.15 0.00 70.81 278.18 281.36 310.95 56.87 123.14 227.09 0.00 0.00 0.00 0.00 1.08 0.00 40 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 3.50 0.00 92.39 352.31 395.10 388.25 94.44 168.08 286.86 0.00 0.00 0.00 0.00 2.94 0.00 41 ER6a ExonRegion 0 1.30 0.15 0.50 0.36 0.94 0.87 1.49 0.51 0.78 0.17 76.23 318.34 412.51 383.94 95.43 119.81 229.29 0.14 0.00 0.11 0.00 0.66 0.37 42 E6a_E7a KnownJunction 0 7.11 0.00 0.00 0.00 0.00 0.00 0.00 4.07 1.27 0.00 75.18 334.31 288.94 372.48 104.58 92.97 255.54 0.00 0.00 0.00 0.00 0.00 0.00 43 ER7a ExonRegion 0 4.19 0.00 0.00 0.00 2.17 0.99 2.61 1.05 0.58 0.00 79.04 288.06 417.07 500.88 138.85 132.80 260.00 0.00 0.00 0.00 1.19 1.40 0.00 44 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 6.62 0.00 0.00 0.00 60.02 292.15 463.77 438.46 180.85 133.38 199.91 0.00 0.00 0.00 0.00 3.12 0.00 45 ER8a ExonRegion 0 1.62 0.00 0.00 0.19 3.39 0.47 2.66 0.25 0.33 0.00 58.66 226.10 233.29 318.88 93.39 101.86 137.36 0.00 2.43 0.00 0.00 1.71 0.56 46 E8_Da KnownBoundary 0 0.00 0.00 0.00 0.00 15.70 2.44 5.56 0.00 1.13 0.00 49.33 262.59 351.76 394.55 150.20 88.18 206.45 0.00 9.41 0.00 0.00 6.25 0.00 47 ER8b ExonRegion 0 2.63 1.28 1.12 1.15 2.74 1.73 2.60 1.12 1.25 1.05 27.48 97.54 128.04 168.73 80.10 51.25 77.43 1.05 2.42 1.54 0.85 0.70 1.13