Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC004840.2 Gene 0 32.95 16.86 37.03 33.27 23.77 38.19 22.92 38.38 36.88 32.52 32.10 22.49 19.62 57.05 65.57 104.58 32.58 51.46 27.04 38.95 12.13 11.77 17.83 2 313156 Transcript 0 16.91 8.09 17.25 16.41 14.47 24.12 13.90 16.39 18.40 16.98 16.93 13.64 10.86 32.73 36.37 59.30 19.25 27.60 13.85 23.12 5.90 6.51 9.04 3 IG35 Intergenic 0 12.35 13.30 27.70 23.01 16.18 32.31 16.99 20.56 17.86 22.51 12.76 20.95 15.15 18.75 29.38 40.70 14.09 37.71 13.11 22.99 7.92 6.85 9.38 4 IG35_SR1 SilentIntergenicRegion 0 17.15 11.68 31.70 25.20 17.57 31.40 15.50 19.17 15.87 24.18 14.41 22.65 21.79 19.35 36.72 41.76 11.47 41.84 15.26 20.23 6.77 7.84 11.06 5 IG35_AR1 ActiveIntergenicRegion 0 11.02 16.62 25.48 23.02 15.38 28.33 19.47 21.93 17.59 18.76 8.50 22.55 10.03 18.13 32.78 37.12 13.52 31.39 11.07 26.22 9.05 4.35 10.45 6 IG35_SR2 SilentIntergenicRegion 0 8.27 12.01 25.33 20.59 15.41 37.01 16.33 20.83 20.31 24.14 14.89 17.59 12.58 18.66 18.11 42.87 17.51 39.00 12.61 23.05 8.13 8.06 6.53 7 ER1a ExonRegion 0 16.40 6.56 12.71 14.39 19.26 33.80 18.41 8.28 16.63 17.15 17.47 18.09 12.35 39.70 41.55 70.50 24.51 29.53 13.37 29.64 4.98 7.40 8.53 8 E1_Da NovelBoundary 0 10.74 3.16 15.23 10.45 0.00 16.01 12.10 9.98 19.04 18.29 7.42 12.60 6.33 9.65 22.25 33.84 8.32 30.97 8.85 14.64 5.50 0.00 7.43 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 I1 Intron 0 13.53 8.86 23.66 20.68 16.95 26.97 14.34 22.73 23.95 21.08 9.89 14.25 13.34 19.90 28.22 46.07 13.91 36.11 13.79 26.18 7.29 5.07 8.81 11 I1_SR1 SilentIntronRegion 0 17.68 8.57 26.86 17.72 15.68 26.19 17.26 20.81 23.57 21.41 10.86 10.47 12.37 22.11 28.30 51.65 15.75 45.27 19.52 30.16 7.05 5.13 7.80 12 I1_AR1 ActiveIntronRegion 0 9.73 8.72 23.42 21.83 20.96 28.12 13.47 22.81 27.11 24.44 7.87 14.16 15.17 16.51 30.03 45.97 12.94 33.33 7.15 24.19 8.67 4.97 8.89 13 I1_SR2 SilentIntronRegion 0 11.32 9.40 20.05 24.09 15.71 27.50 11.55 26.12 22.29 18.09 10.53 19.69 13.04 20.44 27.28 39.80 12.25 27.50 12.52 23.31 6.52 5.30 10.19 14 I1_AR2 ActiveIntronRegion 0 12.70 9.49 9.76 16.00 2.28 18.13 4.02 9.92 8.55 7.82 8.73 16.04 12.33 11.97 11.71 15.96 13.57 1.98 3.89 9.14 3.18 1.00 8.59 15 Ix Intron 0 14.66 10.10 23.09 19.54 20.07 31.10 14.35 21.94 21.39 17.04 12.52 16.98 10.91 23.60 26.96 49.94 12.96 26.49 11.01 18.38 4.50 5.36 7.49 16 Ix_AR1 ActiveIntronRegion 0 9.68 10.12 20.33 20.19 16.12 27.22 11.97 21.37 23.29 18.36 12.63 14.57 13.18 20.37 24.51 41.38 10.44 27.11 11.06 26.39 5.65 5.67 6.22 17 Ix_AR2 ActiveIntronRegion 0 6.55 4.41 25.65 16.42 8.54 11.75 11.95 11.89 26.79 18.95 10.22 5.57 13.18 22.58 24.59 33.33 6.13 30.97 14.94 34.35 2.31 3.67 3.64 18 Ix_SR1 SilentIntronRegion 0 16.46 10.24 23.89 19.41 21.56 32.74 15.15 22.39 20.66 16.59 12.56 17.99 10.13 24.67 27.76 53.14 13.91 26.16 10.89 15.43 4.18 5.30 8.00 19 E2_Aa NovelBoundary 0 20.52 20.39 51.62 23.44 23.17 33.45 11.04 41.20 42.88 22.05 21.16 18.31 19.97 38.02 39.68 78.10 18.98 85.52 17.04 30.42 6.12 5.51 3.24 20 ER2a ExonRegion 0 34.32 17.71 39.05 34.84 24.14 38.55 23.30 40.88 38.56 33.79 33.31 22.85 20.22 58.49 67.56 107.40 33.25 53.28 28.17 39.73 12.72 12.14 18.60