Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	FBXL18	Gene	0	13.24	13.32	40.59	19.99	15.51	24.98	24.28	30.67	38.61	58.03	47.93	16.24	23.41	46.58	63.17	50.55	40.46	52.38	31.88	35.68	36.79	16.17	26.97
2	382368	Transcript	0	4.50	5.64	6.35	0.69	4.33	11.19	8.48	2.13	4.97	7.11	7.42	3.52	1.43	11.80	13.58	12.98	9.24	11.06	17.84	4.95	6.41	5.65	6.59
3	415009	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	312577	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	399530	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	458142	Transcript	0	33.00	26.67	30.33	25.76	31.20	20.16	41.27	26.03	27.12	24.82	10.15	16.64	21.83	16.83	30.07	37.03	25.80	31.68	25.40	36.49	17.81	13.27	23.37
7	297035	Transcript	0	0.00	0.00	28.38	11.45	0.00	0.00	0.00	34.30	17.16	61.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	49.16	0.00	0.00	0.00	0.00	0.00
8	ER1a	ExonRegion	0	4.68	6.97	11.78	0.75	3.42	22.01	15.63	2.24	9.38	10.54	12.75	0.00	0.90	15.14	23.77	24.22	18.47	21.90	33.95	7.24	11.16	9.40	12.81
9	E1_Ab	KnownBoundary	0	3.04	0.00	1.80	0.00	0.00	5.05	4.06	0.00	2.78	1.29	0.00	0.00	0.00	2.41	0.00	10.25	0.00	1.78	3.95	2.43	0.00	3.12	11.18
10	E1_Ac	KnownBoundary	0	13.56	5.46	25.07	3.43	3.82	19.48	33.56	9.78	24.59	26.81	27.11	0.00	6.49	4.71	4.94	34.69	24.87	85.77	79.34	32.85	13.78	11.45	18.69
11	ER1b	ExonRegion	1	10.58	14.24	20.83	1.36	8.03	49.51	39.72	5.19	19.76	24.08	38.66	0.00	4.69	38.98	58.03	53.50	39.61	53.58	82.82	23.40	26.44	18.75	23.49
12	ER1c	ExonRegion	0	6.73	6.38	21.40	1.78	2.56	24.66	21.94	9.71	23.49	26.01	43.76	4.61	7.33	19.92	30.09	35.22	33.01	46.74	44.32	20.94	13.34	6.27	11.18
13	E1a_E2a	KnownJunction	0	0.00	0.00	17.15	5.09	0.00	15.56	3.97	12.57	15.94	11.52	17.43	6.15	13.15	19.01	16.19	11.62	8.42	10.65	9.13	3.13	14.09	6.00	8.45
14	I1_AR1	ActiveIntronRegion	0	4.74	2.68	20.72	9.79	4.66	5.61	9.73	14.02	15.05	12.63	0.99	0.00	5.29	1.11	11.99	16.50	6.79	10.25	6.59	8.17	4.31	0.76	8.71
15	I1_SR2	SilentIntronRegion	0	6.17	2.47	16.20	7.23	8.10	4.78	9.38	17.02	10.37	12.12	2.51	2.30	4.84	1.34	10.65	12.40	6.03	13.65	3.94	6.42	2.89	1.42	6.88
16	E2_Aa	NovelBoundary	0	18.45	31.84	17.92	11.59	19.95	16.24	45.93	5.59	13.14	18.91	5.37	0.00	6.82	3.00	9.64	8.72	9.54	9.20	23.06	15.15	5.44	3.00	7.51
17	ER2a	ExonRegion	0	14.22	10.52	53.09	21.78	13.90	22.76	13.93	41.56	55.96	75.07	108.56	41.63	30.75	61.55	76.35	78.46	74.78	92.90	69.23	45.25	61.73	16.24	38.65
18	E2a_E3a	KnownJunction	0	3.48	6.05	67.92	30.27	27.76	57.18	31.09	38.45	55.47	88.24	74.91	31.06	55.35	75.99	59.46	56.65	107.43	65.91	66.07	53.43	84.39	18.86	20.57
19	ER3a	ExonRegion	0	8.56	10.76	55.88	19.61	13.12	27.75	32.37	32.43	44.17	88.16	102.20	39.04	40.26	77.90	96.00	45.53	68.33	66.63	38.53	40.73	49.50	25.81	29.42
20	E3_Ab	KnownBoundary	0	23.63	6.51	71.26	20.88	3.06	18.40	16.78	35.73	46.50	96.14	77.44	30.76	19.80	92.83	78.62	55.28	67.51	71.92	44.42	56.63	52.08	8.02	16.05
21	ER3b	ExonRegion	0	8.02	10.91	72.77	26.70	11.17	34.60	23.60	48.13	62.23	100.87	90.12	23.92	43.45	88.12	120.35	87.42	67.79	97.78	45.39	51.05	61.15	24.38	39.69
22	E3_Ac	KnownBoundary	1	0.00	8.68	46.92	11.75	4.07	52.36	8.66	25.14	38.31	78.71	43.54	30.16	13.64	64.63	92.96	116.89	18.89	56.58	38.12	31.89	40.40	8.08	35.34
23	ER3c	ExonRegion	1	2.94	8.93	40.60	15.62	4.44	33.26	22.73	44.59	53.47	109.85	99.27	17.24	18.36	72.87	70.61	82.06	38.72	80.17	53.23	37.76	65.33	15.93	30.56
24	E3_Da	KnownBoundary	1	0.00	10.66	20.46	6.46	7.47	5.22	27.43	25.79	38.98	78.92	62.81	0.00	5.84	35.73	4.45	27.17	34.60	33.20	29.93	19.75	63.45	5.27	4.35
25	E3a_E3d	KnownJunction	0	0.00	0.00	28.38	11.45	0.00	0.00	0.00	34.30	17.16	61.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	49.16	0.00	0.00	0.00	0.00	0.00
26	E3_Ad	KnownBoundary	0	7.33	6.71	36.28	23.51	15.20	19.36	14.57	25.30	14.18	48.92	54.38	18.46	13.31	21.25	19.66	31.96	27.58	57.37	4.52	33.30	24.77	11.57	10.59
27	ER3d	ExonRegion	1	7.76	10.17	47.18	24.08	13.38	25.37	31.78	54.45	47.35	123.48	122.42	22.37	18.76	70.38	60.93	59.94	50.06	103.78	41.41	47.16	83.01	14.24	18.60
28	ER3e	ExonRegion	0	6.80	7.11	46.58	18.95	8.64	29.54	19.88	34.70	48.69	97.12	77.93	15.18	22.17	70.03	82.04	71.60	48.03	71.45	34.35	49.91	51.39	18.60	31.25
29	E3b_E4a	KnownJunction	0	12.30	11.84	48.40	26.27	24.96	47.08	26.10	50.73	75.29	103.18	75.91	5.55	20.13	55.27	89.50	85.62	64.33	62.97	23.34	43.21	66.78	33.43	42.00
30	I3	Intron	0	2.71	3.14	9.31	3.77	3.36	3.40	7.34	4.85	3.99	8.53	11.12	2.28	3.60	7.26	11.67	15.23	6.99	7.83	6.66	5.84	2.82	2.07	4.30
31	I3_SR1	SilentIntronRegion	0	2.84	3.35	9.37	3.75	3.38	3.22	7.71	5.04	4.13	8.93	11.65	2.43	3.85	7.39	12.08	15.59	7.25	7.85	6.99	5.74	2.76	2.21	4.33
32	I3_AR1	ActiveIntronRegion	1	1.82	2.44	11.77	4.60	2.30	2.66	4.86	4.60	4.66	10.89	10.73	0.82	1.09	7.63	16.70	12.25	6.55	9.37	5.42	6.56	3.36	2.60	6.08
33	E4_Aa	NovelBoundary	0	0.00	3.16	14.75	3.26	0.00	0.00	0.00	6.98	6.74	1.61	0.00	0.00	0.00	0.00	26.82	4.36	0.00	9.70	0.00	5.75	5.31	3.12	8.11
34	ER4a	ExonRegion	0	7.15	5.34	51.00	15.83	13.39	34.30	27.84	32.86	46.89	79.83	51.73	5.91	17.18	63.10	92.24	65.05	53.79	54.66	37.54	47.43	55.81	21.13	25.10
35	E4_Da	NovelBoundary	0	3.26	0.00	33.14	17.05	0.00	0.00	5.52	17.42	14.73	20.25	2.68	0.00	0.00	7.00	17.80	7.52	0.00	18.49	7.91	9.27	2.35	0.00	4.27
36	E4a_E5a	KnownJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	4.64	0.00	4.86	0.00	0.00	0.00	0.00	4.45	3.25	4.77	0.00	14.21	0.00	0.00	0.00	0.00
37	E4a_E6a	KnownJunction	0	3.56	0.00	48.49	13.75	4.16	27.20	14.40	20.13	34.69	56.11	21.74	0.00	0.00	33.43	65.64	55.20	44.97	67.49	26.92	35.73	30.95	6.18	32.35
38	E4a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	I4	Intron	0	6.05	4.65	16.30	8.27	6.31	4.85	11.44	5.89	8.55	12.45	3.73	0.25	4.67	4.24	14.34	5.73	6.37	9.64	3.87	10.33	4.56	2.23	3.99
40	I4_AR1	ActiveIntronRegion	0	4.95	0.43	14.36	4.24	4.54	7.40	8.13	6.57	11.32	15.25	4.93	0.76	3.28	5.31	15.76	6.32	7.01	11.27	5.40	9.03	5.15	2.21	2.50
41	I4_AR2	ActiveIntronRegion	0	7.18	7.07	18.63	11.38	7.63	3.82	14.26	6.07	7.79	12.07	3.23	0.00	6.05	3.96	14.61	5.27	6.19	9.35	3.10	12.02	4.60	2.52	5.22
42	I4_AR3	ActiveIntronRegion	0	3.39	7.32	13.15	2.00	5.35	1.83	8.12	1.73	4.20	5.89	3.35	0.00	0.00	2.06	7.54	11.29	9.90	7.39	3.19	5.67	3.23	0.00	2.94
43	E5_Aa	NovelBoundary	0	16.45	12.76	11.71	6.43	8.06	5.45	6.62	13.27	4.66	17.97	2.68	0.00	0.00	7.24	18.54	8.03	3.65	11.15	0.00	18.73	2.90	3.12	3.59
44	ER5a	ExonRegion	1	7.29	5.24	14.15	9.74	9.93	6.16	13.18	8.29	9.12	13.52	7.46	6.65	5.04	8.92	29.20	10.11	7.07	9.07	6.38	10.04	4.67	3.99	8.10
45	E5_Da	KnownBoundary	0	31.12	14.34	20.11	18.78	21.22	7.50	37.14	21.15	16.52	26.35	25.95	0.00	6.33	7.12	30.66	34.26	15.05	14.96	12.24	13.74	14.39	8.76	10.50
46	E5a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER5b	ExonRegion	1	48.71	45.09	53.84	44.99	44.04	32.16	57.77	46.74	46.98	43.10	16.56	30.91	43.67	27.08	51.15	59.42	42.66	54.65	48.50	62.87	31.45	26.02	43.80
48	E5_Ab	KnownBoundary	0	3.70	2.76	10.64	15.22	6.45	20.44	23.45	21.32	15.25	31.86	2.32	0.00	6.82	7.48	16.81	0.00	17.67	2.49	0.00	20.20	8.65	5.88	0.00
49	ER5c	ExonRegion	0	11.08	10.38	12.07	11.43	23.34	14.87	33.94	17.43	17.45	19.08	5.35	1.66	5.89	2.49	12.53	10.12	9.27	12.15	0.00	16.43	6.80	4.12	5.31
50	E5_Db	KnownBoundary	0	44.01	42.23	37.79	30.57	86.59	19.70	83.64	23.78	18.26	10.56	4.84	6.45	0.00	2.88	17.80	25.21	8.70	37.97	8.75	23.65	6.24	3.00	20.23
51	ER5d	ExonRegion	0	17.29	8.25	6.82	6.53	18.35	8.16	24.76	5.33	7.25	6.54	3.73	2.38	0.00	6.59	8.99	14.65	8.93	8.72	2.29	10.10	4.16	0.53	2.94
52	E5_Dc	NovelBoundary	0	3.26	6.12	14.31	13.88	15.53	7.95	10.25	23.00	10.01	17.81	0.00	0.00	0.00	0.00	6.06	0.00	14.31	9.08	0.00	11.38	0.00	2.33	6.32
53	E6_Aa	NovelBoundary	0	0.00	0.00	20.11	16.98	0.00	0.00	10.02	2.05	3.41	7.63	0.00	0.00	0.00	2.24	0.00	0.00	4.39	4.06	0.00	2.94	5.75	0.00	0.00
54	ER6a	ExonRegion	0	11.00	12.58	30.75	15.44	14.60	24.51	19.33	24.73	32.76	47.68	36.38	10.55	14.97	40.85	49.17	39.28	33.36	37.27	25.49	26.35	32.19	14.53	24.83
55	E6_Da	NovelBoundary	0	70.98	57.69	18.10	13.45	60.10	48.04	46.55	24.85	12.53	35.19	17.58	25.66	24.84	15.54	13.72	43.75	38.80	9.04	30.31	28.89	22.24	12.55	13.49
56	E6_Db	NovelBoundary	0	89.65	60.84	5.65	2.63	56.03	61.84	128.60	10.97	0.00	32.83	0.00	17.11	60.55	19.48	0.00	3.16	0.00	0.00	7.34	2.56	0.00	27.19	0.00
57	ER6b	ExonRegion	0	4.32	4.32	0.92	0.62	5.24	0.38	1.32	2.02	0.57	3.68	2.09	7.04	1.95	8.46	3.38	1.73	0.00	0.23	1.73	2.66	1.65	1.91	0.37
58	I6	Intron	1	9.11	16.67	62.75	28.08	21.49	43.87	26.09	42.22	43.88	70.04	50.89	7.30	16.26	58.51	66.13	50.94	35.80	58.77	28.48	34.53	40.86	19.14	18.72
59	I6_AR1	ActiveIntronRegion	1	9.48	16.48	61.40	22.30	21.25	42.84	26.76	42.14	43.45	66.99	49.95	7.17	16.47	55.01	62.78	45.06	32.36	54.59	26.14	31.34	39.96	16.89	17.07
60	I6_SR2	SilentIntronRegion	1	5.48	19.32	90.29	39.65	13.50	41.43	12.82	50.20	52.66	86.85	55.79	11.22	18.55	60.02	61.98	56.61	50.11	83.32	39.53	53.58	38.97	26.42	20.69
61	I6_AR2	ActiveIntronRegion	1	8.50	17.01	63.36	46.72	23.86	48.27	26.14	41.47	44.28	78.48	53.78	7.14	15.29	71.03	79.13	71.10	45.78	69.81	35.09	42.83	44.61	26.00	24.37
62	Ix	Intron	0	4.89	16.62	33.42	13.71	26.15	60.29	23.29	16.02	21.59	27.33	23.01	7.65	15.16	33.33	30.22	26.95	21.69	24.98	29.43	16.26	20.74	8.15	31.31
63	Ix_AR3	ActiveIntronRegion	0	0.00	4.03	0.00	0.00	8.03	16.29	2.65	0.00	0.00	0.00	9.59	0.00	0.00	20.86	16.33	8.92	13.14	1.81	12.62	6.38	6.57	0.00	8.75
64	Ix_SR1	SilentIntronRegion	0	4.34	25.26	25.06	10.87	43.59	99.41	43.80	13.33	14.30	19.80	24.57	10.60	28.14	65.56	33.06	35.90	25.10	24.41	56.67	16.57	24.47	6.03	66.00
65	Ix_AR2	ActiveIntronRegion	0	6.29	18.29	43.86	17.88	27.61	64.38	24.80	20.77	28.69	36.00	26.29	9.10	16.67	30.51	33.40	30.02	23.34	31.21	28.65	18.84	23.78	10.70	30.60
66	ER7a	ExonRegion	0	6.35	0.00	0.81	3.89	2.31	8.58	11.18	6.56	2.59	5.51	2.34	0.00	1.43	0.58	2.73	0.00	3.30	3.51	0.00	1.86	2.86	1.80	0.00
67	E7_Da	NovelBoundary	0	3.26	0.00	3.90	23.14	8.40	5.62	8.21	7.15	15.86	15.90	0.00	0.00	0.00	0.00	4.45	3.25	0.00	10.99	0.00	2.68	9.45	0.00	0.00
68	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	2.06	0.00	5.68	2.25	0.00	2.58	1.67	2.16	0.00	0.00	0.00	0.00	0.00	4.39	0.00	0.00	0.00	0.00	0.00	0.00
69	I7	Intron	0	2.63	3.69	7.22	13.03	4.93	3.77	7.88	7.80	8.17	11.38	0.41	0.27	1.86	0.48	3.56	0.55	2.03	9.45	1.73	6.11	7.52	1.34	3.86
70	I7_SR1	SilentIntronRegion	0	2.63	3.69	7.23	13.03	4.93	3.77	7.89	7.80	8.18	11.38	0.41	0.27	1.86	0.48	3.56	0.55	2.03	9.45	1.73	6.11	7.52	1.34	3.86
71	E8_Aa	NovelBoundary	0	14.15	3.35	24.84	45.42	12.56	2.84	47.30	21.93	24.36	19.42	0.00	0.00	0.00	0.00	0.00	4.27	0.00	12.06	9.51	14.76	5.37	5.88	0.00
72	ER8a	ExonRegion	0	7.37	2.56	4.58	7.39	14.34	5.87	14.79	3.34	9.64	7.28	3.16	5.61	9.73	5.84	12.07	7.49	5.89	6.67	2.01	7.33	6.24	0.66	1.92
73	E8_Da	NovelBoundary	0	10.08	5.85	9.46	31.20	3.74	2.84	25.00	19.51	11.60	12.28	0.00	0.00	5.84	4.30	0.00	4.10	0.00	9.04	0.00	6.07	11.00	3.12	11.87
74	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
75	I8	Intron	0	5.88	7.65	10.99	25.54	15.15	11.30	17.54	17.01	13.61	16.82	1.82	0.76	3.24	1.32	5.83	1.49	2.34	13.30	1.46	10.27	11.09	1.04	5.15
76	I8_SR1	SilentIntronRegion	0	5.93	7.04	11.26	26.25	14.55	11.10	17.46	15.59	13.13	16.22	1.87	0.77	2.24	1.29	5.78	1.40	2.10	12.80	1.20	8.92	10.84	1.13	4.70
77	I8_AR1	ActiveIntronRegion	0	5.54	12.53	8.87	20.11	19.99	13.02	18.30	28.39	17.54	21.72	1.44	0.67	11.18	1.52	6.28	2.22	4.32	17.33	3.57	21.07	13.17	0.39	8.78
78	E9_Aa	NovelBoundary	0	3.70	18.22	14.22	38.62	27.67	31.35	24.07	32.16	28.39	37.26	2.37	6.00	0.00	4.83	0.00	0.00	4.77	9.24	11.86	5.75	0.00	2.76	8.71
79	ER9a	ExonRegion	0	4.50	9.26	3.88	16.03	12.98	10.58	19.69	22.62	15.09	14.53	1.17	2.01	3.77	1.71	1.99	1.80	5.03	4.74	1.93	12.30	10.03	2.53	7.97
80	IG6	Intergenic	0	2.64	6.42	10.56	20.96	6.67	6.28	11.35	19.00	17.44	19.41	0.15	0.28	2.47	0.49	4.26	0.24	2.98	12.72	2.54	11.23	10.76	1.60	4.36
81	IG6_SR1	SilentIntergenicRegion	0	2.20	2.72	6.16	17.07	6.29	3.91	9.40	18.48	15.30	18.16	0.25	0.46	1.88	0.29	3.67	0.26	2.00	10.36	1.38	9.96	8.55	0.90	4.74
82	IG6_AR2	ActiveIntergenicRegion	0	0.00	5.85	12.25	24.70	5.35	3.21	4.47	18.80	16.06	23.22	0.00	0.00	0.00	0.00	2.18	0.00	1.65	11.09	0.00	16.49	6.06	0.00	2.94
83	IG6_AR1	ActiveIntergenicRegion	0	3.38	12.36	17.61	27.18	7.32	10.12	14.56	19.85	20.91	21.39	0.00	0.00	3.45	0.81	5.23	0.21	4.56	16.54	4.42	13.23	14.37	2.75	3.78