Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KDELR2 Gene 0 102.83 131.91 139.54 109.50 129.07 129.06 151.41 112.95 118.38 134.31 134.75 195.89 218.61 196.55 197.58 118.19 104.47 142.56 85.87 111.04 342.49 425.21 270.45 2 258739 Transcript 0 3.86 4.48 5.80 3.16 3.01 2.58 3.10 3.00 2.41 4.52 0.07 0.59 0.29 1.29 1.73 0.89 0.37 2.10 0.00 0.88 6.95 3.35 4.29 3 463747 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.07 0.02 0.00 4 382267 Transcript 0 1.61 2.99 6.78 2.78 6.02 3.14 9.21 4.08 3.16 2.39 1.51 9.29 7.88 2.36 3.46 1.80 2.25 4.39 2.46 4.81 8.63 4.19 7.01 5 462052 Transcript 0 24.46 29.74 16.54 30.01 23.31 7.12 49.61 22.69 18.63 10.00 13.59 25.35 24.53 11.54 16.88 21.69 14.12 12.33 3.52 28.99 6.78 44.64 17.39 6 490996 Transcript 0 6.45 2.70 0.00 1.86 4.33 2.38 5.96 0.00 3.36 1.37 0.00 0.00 0.00 7.18 4.33 0.00 0.00 0.00 0.00 2.81 5.50 5.39 12.04 7 454368 Transcript 0 23.15 22.13 24.62 34.84 24.36 19.30 30.65 20.79 20.87 16.84 12.48 29.19 24.00 24.12 17.84 26.86 18.63 28.62 14.65 22.22 32.72 37.98 32.96 8 ER1a ExonRegion 0 0.12 1.04 0.00 0.00 0.00 1.31 1.45 0.00 0.00 0.00 0.00 0.00 0.00 1.53 1.15 0.00 0.00 0.14 0.00 0.00 0.00 0.00 0.00 9 E1_Ab KnownBoundary 0 0.00 3.35 1.71 0.00 0.00 5.51 6.54 4.64 0.00 1.10 0.00 0.00 0.00 4.94 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 1 63.86 41.96 4.66 2.19 30.22 154.89 89.58 3.54 6.54 9.20 0.90 0.00 0.00 53.48 57.81 48.57 1.93 68.86 20.04 10.02 19.56 59.66 94.19 11 E1_Ac KnownBoundary 1 87.65 28.55 0.00 3.16 32.85 211.53 138.23 0.00 3.50 0.00 0.00 0.00 0.00 57.98 45.49 55.54 4.11 34.45 22.68 6.52 26.93 54.56 102.44 12 E1_Ad KnownBoundary 1 112.32 91.10 18.18 6.99 92.44 282.62 121.09 11.21 17.53 28.15 14.53 0.00 0.00 47.50 56.49 115.18 8.04 144.34 47.44 40.01 70.12 125.96 201.97 13 ER1c ExonRegion 1 130.17 86.43 12.25 5.45 80.27 340.48 176.75 10.37 14.82 22.75 6.12 0.00 0.00 106.65 111.21 122.35 6.60 149.05 58.93 41.49 63.54 161.82 235.91 14 ER1d ExonRegion 1 160.04 74.01 25.60 15.53 74.45 206.17 120.85 20.52 33.20 29.97 44.93 0.60 9.71 132.44 132.55 113.87 32.13 174.89 59.52 59.72 154.70 258.96 290.01 15 E1_Ae KnownBoundary 0 77.72 14.34 42.25 25.07 20.29 8.92 16.16 19.59 50.81 39.16 16.64 17.56 5.68 45.03 54.02 28.88 11.41 62.10 8.47 29.91 89.52 65.76 103.72 16 ER1e ExonRegion 0 187.17 107.40 113.95 74.88 42.25 68.12 66.73 106.78 90.73 115.63 135.30 58.78 61.07 185.46 201.86 81.40 114.28 146.75 73.12 126.36 404.36 334.24 193.79 17 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 18 E1a_E3a KnownJunction 0 94.16 200.75 240.44 150.40 66.21 107.84 93.05 175.43 205.35 227.44 266.07 195.21 100.81 461.18 416.59 183.03 261.06 320.56 126.22 249.98 824.79 762.42 460.62 19 E1a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER2a ExonRegion 0 4.83 5.74 18.66 8.34 18.07 3.64 25.74 7.88 6.37 5.50 4.53 21.56 23.64 4.62 10.37 5.40 6.74 11.22 7.38 11.68 18.10 10.24 21.03 21 E2a_E3a KnownJunction 0 0.00 3.22 1.69 0.00 0.00 5.79 1.90 4.35 3.12 1.67 0.00 6.30 0.00 2.47 0.00 0.00 0.00 1.95 0.00 2.75 4.76 2.33 0.00 22 Ix Intron 0 16.95 12.90 20.30 23.63 14.96 6.95 28.12 12.01 13.10 8.92 9.38 25.55 30.49 7.12 13.35 15.87 14.22 24.58 13.76 21.20 26.57 18.46 29.30 23 Ix_AR5 ActiveIntronRegion 0 17.30 16.00 23.37 27.09 17.45 6.46 35.96 13.83 14.01 7.79 9.76 37.73 47.73 6.10 15.42 12.41 17.69 18.99 11.98 19.24 23.61 12.18 28.99 24 Ix_AR4 ActiveIntronRegion 0 18.73 13.15 19.91 26.12 13.40 8.50 29.36 13.23 15.68 11.08 11.92 35.74 32.65 8.73 9.58 19.27 17.13 32.92 17.31 24.19 35.68 22.26 36.71 25 Ix_SR3 SilentIntronRegion 0 30.81 18.58 17.32 20.97 16.41 14.02 35.51 12.78 12.93 9.62 10.31 14.74 19.12 9.07 13.20 22.52 20.28 41.06 24.78 34.74 23.48 18.13 41.96 26 Ix_AR3 ActiveIntronRegion 0 13.64 11.00 18.80 22.25 13.32 8.97 28.42 6.61 10.25 9.66 9.29 15.93 25.87 9.45 12.00 20.16 9.35 25.42 13.40 24.84 29.13 26.48 34.04 27 Ix_SR2 SilentIntronRegion 0 19.85 12.50 25.40 25.40 15.58 7.71 28.41 15.00 14.29 14.01 11.46 27.84 15.20 7.85 15.59 16.66 12.81 34.87 16.14 25.92 32.78 23.59 29.12 28 Ix_SR1 SilentIntronRegion 0 21.83 10.09 23.28 18.47 14.64 6.15 20.90 6.47 13.45 6.07 5.86 12.02 19.24 5.93 18.64 11.87 17.49 24.69 11.72 20.07 29.67 17.50 26.87 29 Ix_AR1 ActiveIntronRegion 0 30.90 25.95 27.59 40.69 22.28 7.85 30.16 26.21 19.32 13.96 10.50 30.92 39.57 6.35 15.20 20.60 16.57 35.16 20.47 31.55 28.10 31.01 35.41 30 ER3a ExonRegion 0 94.64 158.68 316.84 255.37 380.33 318.10 271.23 302.15 326.84 328.62 435.04 433.29 512.93 575.42 597.08 344.03 315.94 458.97 233.45 393.99 818.86 1185.77 742.59 31 E3_Da KnownBoundary 0 40.16 27.36 30.93 40.85 44.99 13.00 38.07 40.54 15.68 12.44 22.11 30.61 18.99 17.13 23.49 23.16 33.01 18.12 26.73 40.97 2.47 46.84 32.95 32 E3a_E4b KnownJunction 0 172.40 142.54 455.96 365.62 815.96 723.11 463.27 451.08 463.94 463.26 644.01 813.26 1078.18 788.22 874.72 338.80 485.46 623.13 289.42 504.95 1370.53 1444.19 991.83 33 ER3b ExonRegion 0 24.46 29.74 16.54 30.01 23.31 7.12 49.61 22.69 18.63 10.00 13.59 25.35 24.53 11.54 16.88 21.69 14.12 12.33 3.52 28.99 6.78 44.64 17.39 34 E3_Db NovelBoundary 1 66.38 76.43 33.14 44.48 53.74 8.12 46.55 33.56 35.85 22.11 6.00 25.66 94.96 6.89 8.90 26.32 33.10 8.62 3.86 32.34 10.50 35.70 7.00 35 Ix Intron 0 60.18 33.95 36.48 49.68 33.95 18.78 43.87 32.68 31.20 23.30 17.12 57.38 51.94 23.82 31.17 40.42 23.83 30.01 16.72 32.11 37.09 48.23 41.54 36 Ix_AR5 ActiveIntronRegion 0 50.30 28.13 34.67 50.07 29.93 17.27 43.75 32.98 26.28 19.75 11.66 59.65 54.47 21.80 23.49 30.85 19.68 22.38 13.13 29.12 31.45 48.14 33.93 37 Ix_AR2 ActiveIntronRegion 0 73.83 41.91 40.25 51.83 40.03 21.33 46.46 34.07 37.83 28.22 23.75 57.98 52.21 27.24 40.89 52.63 29.45 39.59 21.40 37.02 45.02 51.04 51.79 38 E4_Aa NovelBoundary 0 34.08 26.38 20.14 43.32 16.21 5.56 16.16 15.57 12.04 12.44 17.58 79.08 26.30 31.96 0.00 40.07 12.53 28.23 27.20 18.02 56.71 39.50 27.49 39 ER4a ExonRegion 0 23.15 22.13 24.62 34.84 24.36 19.30 30.65 20.79 20.87 16.84 12.48 29.19 24.00 24.12 17.84 26.86 18.63 28.62 14.65 22.22 32.72 37.98 32.96 40 E4_Ab KnownBoundary 0 31.26 28.15 30.25 43.32 27.16 5.74 43.28 39.60 22.22 20.60 14.64 18.61 61.20 16.95 29.30 31.36 33.85 32.25 9.51 20.71 14.33 50.70 31.58 41 ER4b ExonRegion 0 295.44 234.31 646.73 481.18 329.41 398.03 344.23 592.00 634.61 714.27 802.87 1067.73 1293.23 1205.00 1056.64 756.32 601.72 886.92 550.84 627.85 1665.85 2654.30 1711.36 42 E4_Da KnownBoundary 1 209.67 297.05 670.05 456.75 330.48 328.22 300.13 630.65 712.98 865.65 1200.99 899.99 918.28 997.89 984.74 320.77 1050.68 569.90 377.89 655.22 2977.42 1614.97 840.74 43 ER4c ExonRegion 1 173.55 243.47 480.98 362.39 331.61 365.40 317.52 462.24 535.29 644.32 924.29 936.14 872.35 898.19 825.11 359.37 810.43 526.00 283.44 504.07 2465.11 1549.28 835.83 44 E4b_E5a KnownJunction 0 183.66 290.80 430.56 388.23 460.19 463.77 509.46 365.97 435.21 503.80 718.29 821.97 743.13 918.78 923.05 454.15 562.60 555.02 265.98 529.94 1860.24 1514.98 906.73 45 E4b_E6a KnownJunction 0 6.45 2.70 0.00 1.86 4.33 2.38 5.96 0.00 3.36 1.37 0.00 0.00 0.00 7.18 4.33 0.00 0.00 0.00 0.00 2.81 5.50 5.39 12.04 46 ER5a ExonRegion 0 331.26 303.00 633.79 454.37 365.32 473.94 454.16 459.30 534.63 590.84 648.27 934.27 1228.07 1099.82 1068.20 655.38 551.85 831.32 448.53 512.34 2050.42 1883.03 1490.33 47 E5_Da NovelBoundary 0 6.52 8.95 11.18 36.43 14.26 19.19 33.34 9.78 7.99 9.59 5.37 6.00 20.13 10.95 5.81 0.00 8.70 6.43 8.28 19.75 15.26 25.96 11.87 48 E5a_E6a KnownJunction 0 562.99 424.99 793.29 555.94 607.90 575.35 590.50 519.42 541.17 603.48 566.20 742.89 1065.84 1074.17 971.39 599.84 458.44 766.47 412.62 444.74 1771.40 1392.33 1257.74 49 E6_Aa NovelBoundary 0 28.45 24.47 18.92 44.18 19.02 2.67 25.88 15.36 19.04 15.10 10.11 18.76 68.18 22.37 20.03 6.84 8.32 7.42 9.60 22.37 11.55 0.00 13.91 50 ER6a ExonRegion 0 429.75 663.31 658.19 513.48 747.26 591.00 747.52 497.39 499.52 576.39 520.55 805.89 811.50 665.64 748.56 393.14 340.55 426.33 329.78 414.12 1160.98 1718.94 959.53 51 E6_Da KnownBoundary 1 227.00 259.76 395.58 422.86 363.67 403.52 686.73 387.41 382.63 472.23 145.88 509.42 212.00 194.19 213.86 98.69 122.21 76.85 73.51 223.97 238.34 1006.13 336.76 52 ER6b ExonRegion 0 80.05 136.97 26.71 27.83 60.27 66.00 114.44 30.25 23.61 32.80 9.78 57.03 48.18 21.04 24.34 11.79 5.38 5.62 8.57 15.78 14.91 117.78 31.30 53 E6_Db KnownBoundary 0 48.01 51.57 60.29 20.48 32.09 5.00 9.67 24.03 6.25 30.94 0.00 24.76 12.17 0.00 5.93 7.52 0.00 2.16 11.58 12.53 14.21 28.66 19.63 54 ER6c ExonRegion 0 7.61 7.92 11.60 6.31 6.01 3.85 4.76 6.00 4.82 9.03 0.14 1.18 0.59 1.04 2.30 1.78 0.74 4.06 0.00 1.75 13.91 6.71 8.58 55 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.13 0.04 0.00