Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RAC1 Gene 0 787.93 741.51 988.82 717.55 906.67 957.66 696.30 930.72 697.55 812.01 830.43 598.22 552.29 690.23 630.37 664.35 551.42 566.21 532.56 537.79 642.45 1018.29 532.95 2 396729 Transcript 1 1.75 4.14 0.00 1.41 3.04 40.79 6.35 1.67 3.28 1.07 33.06 0.00 0.00 2.63 1.70 23.26 15.25 14.91 13.73 1.32 39.97 0.36 13.57 3 348035 Transcript 0 78.96 32.69 29.60 18.77 63.39 65.17 58.05 37.23 24.61 21.61 19.92 17.65 6.49 18.12 32.81 16.69 14.47 14.21 27.44 33.55 12.71 16.67 17.39 4 356142 Transcript 0 17.86 3.02 13.92 12.62 15.91 2.82 7.60 13.03 9.34 2.80 9.50 4.10 9.07 7.45 12.47 7.72 4.88 0.03 9.90 2.53 122.46 60.22 28.58 5 438555 Transcript 0 1.94 2.03 8.27 4.43 7.58 3.06 6.29 3.89 3.35 2.53 5.96 6.49 15.05 5.68 0.00 3.10 0.28 10.16 2.79 8.69 5.60 1.48 10.89 6 415346 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 488373 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 497741 Transcript 0 4.43 2.11 6.41 4.61 7.79 4.17 5.80 3.20 2.70 1.77 1.20 2.96 2.52 1.47 2.37 3.08 4.09 2.67 5.26 5.73 1.83 1.30 2.44 9 473564 Transcript 0 44.39 23.16 61.70 31.79 59.00 32.14 34.97 39.31 33.90 37.17 36.23 22.39 28.90 25.81 25.95 36.41 30.00 37.44 21.06 33.00 65.15 49.44 44.59 10 495499 Transcript 0 50.39 18.47 80.34 29.92 46.27 23.81 31.25 51.92 34.55 35.62 27.01 19.75 17.40 24.70 27.02 41.42 33.25 40.78 25.11 34.03 28.26 21.61 21.04 11 ER1a ExonRegion 0 1.75 4.14 0.00 1.41 3.04 40.79 6.35 1.67 3.28 1.07 33.06 0.00 0.00 2.63 1.70 23.26 15.25 14.91 13.73 1.32 39.97 0.36 13.57 12 E1_Ac KnownBoundary 0 3.78 9.34 0.00 2.06 4.16 106.42 19.34 0.00 7.09 4.24 84.86 0.00 5.68 2.94 0.00 59.39 66.76 61.43 12.99 3.13 119.66 0.00 36.11 13 E1_Ad KnownBoundary 0 3.70 10.06 1.66 2.06 0.00 103.12 13.29 4.35 3.59 5.78 21.37 0.00 0.00 0.00 0.00 24.87 23.38 26.45 23.72 3.26 28.23 3.00 4.10 14 ER1b ExonRegion 0 6.35 16.27 0.31 2.73 8.03 148.08 24.91 3.56 3.86 3.66 82.51 5.41 0.00 5.99 2.90 67.43 54.67 37.76 49.77 4.92 99.44 2.08 26.43 15 E1_Ae KnownBoundary 0 2.89 50.25 16.17 2.03 18.59 1042.98 258.31 22.06 4.57 17.65 111.40 31.51 6.33 8.77 5.81 145.43 99.58 183.97 72.10 12.34 216.10 2.82 101.58 16 ER1c ExonRegion 0 6.35 23.95 1.23 2.73 11.00 295.85 59.87 6.34 5.49 7.14 107.60 14.91 4.17 11.91 1.93 91.81 78.12 50.71 59.11 8.51 123.90 2.08 35.57 17 ER1d ExonRegion 0 10.02 47.86 1.80 2.73 17.48 783.77 194.45 13.71 7.49 12.77 165.07 29.44 4.69 17.97 9.28 152.97 109.59 88.32 98.53 9.93 286.78 2.08 90.45 18 ER1e ExonRegion 0 83.37 96.13 171.23 90.58 86.98 396.48 141.25 200.93 140.76 221.49 333.25 121.60 162.97 305.95 341.89 431.29 207.21 255.43 234.27 220.28 443.70 305.87 288.36 19 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 20 E1a_E3a KnownJunction 1 457.12 414.93 778.21 482.22 246.86 208.29 162.17 981.30 662.15 1038.46 1291.85 209.77 216.87 578.38 767.66 1439.37 951.66 1025.43 1001.06 1093.69 662.81 1417.49 1002.16 21 ER2a ExonRegion 0 0.04 0.07 0.42 0.26 7.06 1.74 6.39 0.30 0.21 0.47 1.77 3.21 4.04 0.14 0.20 0.56 2.28 3.63 8.73 2.05 0.19 0.36 5.32 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 1 479.30 505.09 899.80 582.58 362.53 500.47 370.25 1125.97 967.27 1344.36 2319.99 396.93 429.20 731.78 791.72 1227.28 1500.39 1167.57 654.15 817.73 906.21 1024.69 820.71 24 E3a_E5a KnownJunction 0 1059.74 688.10 1076.46 706.94 764.52 991.93 673.44 1136.77 886.65 1210.72 1377.19 495.91 561.00 1055.69 968.79 875.92 984.29 809.05 454.98 658.99 697.78 898.54 537.79 25 ER4a ExonRegion 0 8.86 4.22 12.82 9.23 15.58 8.33 11.60 6.41 5.40 3.54 2.40 5.91 5.03 2.94 4.74 6.16 8.19 5.35 10.51 11.47 3.65 2.59 4.87 26 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER5a ExonRegion 0 1099.46 689.16 1795.14 1219.07 1176.74 2147.56 936.28 1902.56 1520.30 2019.45 3102.50 1001.65 1454.35 1866.17 1712.72 1930.27 1957.68 1474.66 1144.44 1440.51 1508.20 2011.27 1213.95 28 E5a_E6a KnownJunction 0 22.82 0.00 8.60 12.59 14.86 0.00 3.97 12.24 9.17 1.58 2.58 0.00 6.82 7.89 4.45 3.67 0.00 0.00 4.52 0.00 76.91 48.74 22.96 29 E5a_E7b KnownJunction 0 677.38 667.18 1727.53 1227.62 1012.14 1033.84 672.73 1800.52 1251.61 1578.54 2102.53 1162.73 1577.98 1869.98 2059.71 1497.81 1620.01 1259.60 1101.49 1147.38 1392.89 2300.97 1006.86 30 ER5b ExonRegion 0 1.94 2.03 8.27 4.43 7.58 3.06 6.29 3.89 3.35 2.53 5.96 6.49 15.05 5.68 0.00 3.10 0.28 10.16 2.79 8.69 5.60 1.48 10.89 31 ER6a ExonRegion 0 21.13 9.06 13.87 11.86 28.54 5.57 13.38 13.68 9.47 2.72 13.12 12.30 20.41 14.47 22.19 15.80 14.65 0.10 15.87 7.58 135.08 72.78 40.75 32 E6a_E7b KnownJunction 0 9.63 0.00 19.28 13.42 4.33 2.90 5.43 13.18 9.37 4.11 12.79 0.00 0.00 0.00 10.75 3.67 0.00 0.00 9.32 0.00 155.37 59.15 22.02 33 ER7a ExonRegion 0 44.39 23.16 61.70 31.79 59.00 32.14 34.97 39.31 33.90 37.17 36.23 22.39 28.90 25.81 25.95 36.41 30.00 37.44 21.06 33.00 65.15 49.44 44.59 34 E7_Ab KnownBoundary 0 51.94 32.82 94.38 33.50 113.50 27.88 62.31 35.28 49.77 49.78 24.22 37.06 20.45 15.01 28.43 8.20 16.83 25.29 4.80 12.34 59.24 40.17 35.34 35 ER7b ExonRegion 0 996.30 596.82 1835.98 1252.18 1107.46 1078.57 751.28 1861.13 1336.81 1631.27 2418.80 1294.93 1827.22 1854.67 1837.43 1588.31 1686.86 1519.00 954.79 1207.75 1749.28 1774.49 987.19 36 E7a_E8b KnownJunction 0 1635.25 619.56 1950.82 1396.09 1202.63 1133.49 785.12 1842.34 1333.64 1590.12 2445.36 1340.39 1405.10 2108.61 2505.60 1888.05 1446.84 1670.41 1242.29 1290.74 1898.17 1712.15 1207.80 37 E7a_E9a NovelJunction 0 6.96 31.11 51.89 17.88 0.00 9.31 0.00 0.00 8.97 5.51 2.42 6.30 0.00 16.72 0.00 14.87 12.06 18.45 12.89 15.08 2.35 9.37 7.43 38 ER8a ExonRegion 0 50.39 18.47 80.34 29.92 46.27 23.81 31.25 51.92 34.55 35.62 27.01 19.75 17.40 24.70 27.02 41.42 33.25 40.78 25.11 34.03 28.26 21.61 21.04 39 E8_Ab KnownBoundary 0 84.24 8.49 89.23 43.05 82.60 27.09 35.15 79.77 35.33 51.95 22.80 5.25 25.32 24.31 17.80 42.89 34.88 38.34 19.95 40.01 37.44 25.90 20.23 40 ER8b ExonRegion 0 2203.81 877.33 1740.25 1133.54 1268.47 1180.38 872.11 1666.51 1222.68 1499.17 2075.71 1131.71 1365.39 1974.39 1885.03 1723.10 1621.01 1648.51 1083.28 1134.08 1999.04 1814.97 1132.93 41 E8a_E9a KnownJunction 0 3364.97 1390.74 1637.38 994.81 1102.21 1122.76 960.98 1569.40 1115.30 1460.81 2035.04 1126.87 1628.14 2037.45 1799.25 1656.49 1566.62 1506.25 957.77 1134.15 1961.99 2058.36 1184.33 42 ER9a ExonRegion 0 3637.95 1506.72 1534.16 879.44 1259.74 1232.86 878.02 1535.49 1109.75 1364.43 1943.99 1359.80 2042.51 1985.32 1944.42 1610.30 1585.82 1538.88 1071.75 1063.19 2073.47 1781.12 1089.85 43 E9_Da KnownBoundary 0 2345.30 1971.10 1703.02 973.04 1272.92 1414.64 1061.36 1686.09 1174.12 1358.65 1761.50 1064.45 1149.28 1986.35 1811.49 1692.89 1417.58 1638.20 1083.89 1135.74 1993.86 1546.82 1060.98 44 ER9b ExonRegion 0 1128.65 1115.44 1362.73 764.99 2018.94 2224.45 1606.46 1266.41 910.12 1105.39 1601.49 918.03 919.12 1451.02 1281.83 1322.06 1179.30 1154.94 886.27 729.93 1513.59 1334.03 897.35 45 E9_Db KnownBoundary 0 1523.53 1100.40 844.94 536.43 1904.92 1604.93 1164.84 808.42 593.48 753.37 1461.00 641.61 652.72 1613.76 1638.80 1100.74 827.77 636.43 616.49 687.68 1417.05 1327.91 1047.83 46 E9_Dc KnownBoundary 0 162.84 119.32 1.54 0.00 282.00 212.78 114.96 5.42 8.77 2.69 62.02 51.47 90.90 285.83 196.55 145.52 47.22 32.83 93.56 53.18 27.12 201.09 143.67 47 ER9c ExonRegion 0 768.50 627.99 536.83 337.74 1141.65 986.15 680.58 532.28 405.12 503.87 904.60 427.38 472.80 1156.91 1072.36 703.26 516.98 472.50 405.60 434.45 850.21 860.00 674.03 48 E9_Dd KnownBoundary 0 0.00 2.50 1.12 0.00 6.45 8.63 13.65 3.12 2.17 0.00 2.00 5.70 0.00 4.47 4.45 3.25 0.00 3.15 17.88 2.43 0.00 21.25 0.00 49 ER9d ExonRegion 0 238.93 201.66 196.47 101.69 414.74 308.18 252.51 135.88 122.28 137.44 168.70 145.04 187.86 360.28 276.42 241.90 125.43 127.29 153.96 126.95 133.45 363.57 219.92 50 ER9e ExonRegion 0 1064.95 1244.80 1479.55 1141.42 1422.09 1401.56 1092.66 1353.41 1011.29 1121.43 842.76 873.47 653.84 765.65 665.95 723.11 518.72 607.01 718.35 694.06 643.77 1493.91 680.19 51 ER9f ExonRegion 0 78.96 32.69 29.60 18.77 63.39 65.17 58.05 37.23 24.61 21.61 19.92 17.65 6.49 18.12 32.81 16.69 14.47 14.21 27.44 33.55 12.71 16.67 17.39 52 IG23 Intergenic 0 10.40 19.85 26.21 28.91 29.43 13.79 23.37 18.16 11.63 17.27 2.32 6.46 7.15 4.86 8.40 16.83 10.58 17.62 14.70 18.80 3.56 2.25 15.58 53 IG23_SR1 SilentIntergenicRegion 0 12.87 15.71 22.83 30.92 33.11 16.53 22.76 12.85 12.41 20.16 3.93 8.32 15.38 4.92 11.98 17.44 11.95 25.30 12.99 27.91 5.52 3.52 17.45 54 IG23_AR2 ActiveIntergenicRegion 0 17.17 12.20 22.33 36.04 19.03 17.32 20.59 17.28 14.82 24.08 6.01 8.66 7.30 3.25 14.51 27.41 17.97 36.75 9.56 31.21 6.61 2.08 24.15 55 IG23_SR2 SilentIntergenicRegion 0 14.15 7.08 7.70 18.10 14.54 12.29 11.32 7.06 9.47 9.88 4.25 10.39 5.47 1.84 5.80 9.96 12.76 16.44 8.34 15.18 2.98 2.81 16.35 56 IG23_AR3 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 8.03 5.50 5.30 0.00 0.00 0.00 4.83 17.32 0.00 0.00 0.00 0.00 0.00 0.00 14.33 6.38 0.00 0.00 10.28 57 IG23_SR3 SilentIntergenicRegion 0 9.97 21.63 28.26 29.65 29.90 13.45 24.60 20.10 11.81 17.36 1.90 5.95 5.69 5.06 8.02 17.28 10.28 16.42 15.70 17.38 3.26 1.98 15.39