Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ARL4A Gene 0 89.36 20.63 22.27 13.53 41.80 39.16 43.90 30.15 22.73 15.32 9.75 21.48 12.15 9.36 14.66 10.06 8.30 8.90 4.70 17.07 9.35 35.68 15.51 2 396662 Transcript 0 6.19 6.89 1.06 0.00 0.00 17.52 6.77 0.24 0.37 0.94 5.31 0.00 0.00 4.90 4.38 1.74 1.90 2.53 3.25 3.31 2.72 3.46 5.43 3 356797 Transcript 0 6.67 0.00 7.95 1.63 3.74 14.65 2.16 0.00 6.13 6.10 27.01 6.00 0.00 2.47 0.00 0.00 3.55 4.52 12.52 14.96 8.09 17.08 0.00 4 396664 Transcript 0 0.00 0.00 11.65 0.00 4.24 0.00 3.89 4.85 3.50 4.97 9.63 0.00 0.00 5.47 0.00 3.59 13.74 3.81 0.00 3.07 2.97 8.21 4.18 5 439721 Transcript 0 0.00 0.00 0.42 0.00 0.00 0.00 0.64 0.38 1.32 0.00 0.00 0.00 0.00 0.00 0.08 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 396663 Transcript 0 53.71 20.03 15.21 8.64 33.54 30.27 40.46 24.80 15.39 10.53 3.43 13.97 7.72 3.81 7.15 2.33 2.56 2.22 3.30 13.25 1.49 17.45 4.47 7 404894 Transcript 0 10.59 0.00 1.45 2.63 4.07 0.00 4.37 0.00 1.22 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 8 399303 Transcript 0 4.05 0.09 0.08 0.05 0.23 0.25 0.66 0.42 0.32 0.07 0.17 0.19 0.03 0.63 0.02 0.04 0.33 0.46 0.11 0.17 0.16 0.18 0.69 9 ER1a ExonRegion 0 12.38 13.77 2.13 0.00 0.00 35.05 13.54 0.49 0.75 1.88 10.61 0.00 0.00 9.81 8.76 3.48 3.80 5.06 6.49 6.62 5.45 6.92 10.86 10 E1_Ab KnownBoundary 0 44.08 33.28 9.64 0.00 0.00 88.59 31.05 7.76 3.15 7.55 14.00 0.00 0.00 12.30 34.98 10.77 8.88 12.89 14.12 14.64 11.31 16.78 22.88 11 ER1b ExonRegion 0 16.31 12.29 6.34 0.90 2.14 16.38 10.11 3.52 2.68 4.68 9.49 1.67 0.00 5.10 6.77 3.37 7.70 3.97 3.21 4.82 7.39 6.24 4.07 12 E1a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E3b KnownJunction 0 6.67 0.00 7.95 1.63 3.74 14.65 2.16 0.00 6.13 6.10 27.01 6.00 0.00 2.47 0.00 0.00 3.55 4.52 12.52 14.96 8.09 17.08 0.00 14 E1a_E3c KnownJunction 0 0.00 0.00 11.65 0.00 4.24 0.00 3.89 4.85 3.50 4.97 9.63 0.00 0.00 5.47 0.00 3.59 13.74 3.81 0.00 3.07 2.97 8.21 4.18 15 ER2a ExonRegion 0 0.00 0.00 0.42 0.00 0.00 0.00 0.64 0.38 1.32 0.00 0.00 0.00 0.00 0.00 0.08 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2b ExonRegion 0 1.07 0.00 0.33 0.00 0.00 1.59 0.38 0.92 0.01 0.29 0.31 0.00 0.00 0.08 1.24 0.00 0.24 0.30 0.00 0.36 0.55 0.00 0.00 18 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 17.66 2.12 2.55 0.00 0.00 5.32 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 0.00 9.39 0.00 0.00 19 ER2c ExonRegion 0 184.02 6.97 1.09 5.02 70.95 40.55 26.82 8.35 2.68 3.18 2.98 0.49 0.67 3.90 2.49 5.43 3.68 7.23 0.00 2.55 22.41 50.72 50.01 20 E2_Ad KnownBoundary 0 568.10 22.96 2.69 11.29 210.27 65.25 82.10 11.13 8.42 5.45 0.00 0.00 0.00 0.00 4.45 11.96 3.74 12.77 0.00 5.69 38.24 123.81 112.25 21 ER2d ExonRegion 1 319.45 21.07 4.52 10.62 112.06 46.92 40.43 11.26 8.09 8.32 3.67 34.93 6.23 4.12 0.80 9.69 6.32 12.87 6.59 8.44 28.95 76.30 60.25 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E2a_E3b KnownJunction 0 110.76 22.04 7.69 5.29 36.84 36.68 14.71 5.46 8.36 6.90 7.00 6.30 7.63 2.47 0.00 8.20 4.77 5.68 8.94 8.95 22.55 8.63 12.63 24 E2a_E3c KnownJunction 0 10.59 0.00 1.45 2.63 4.07 0.00 4.37 0.00 1.22 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 25 ER3a ExonRegion 0 8.10 0.17 0.16 0.10 0.46 0.50 1.32 0.84 0.64 0.15 0.33 0.37 0.07 1.25 0.04 0.08 0.66 0.92 0.23 0.33 0.31 0.36 1.38 26 E3_Ab KnownBoundary 0 2.96 0.00 0.00 0.00 0.00 0.00 1.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 27 E3_Ac KnownBoundary 0 2.89 0.00 0.00 0.00 0.00 0.00 2.21 2.55 1.68 0.00 0.00 0.00 0.00 2.41 0.00 0.00 4.11 2.53 0.00 0.00 0.00 0.00 0.00 28 ER3b ExonRegion 0 110.06 12.88 13.89 9.09 33.89 36.06 17.21 9.79 17.29 13.38 25.77 17.32 3.13 9.20 6.77 6.93 16.50 16.01 15.93 19.86 24.24 25.00 13.70 29 ER3c ExonRegion 0 103.56 21.60 50.62 28.02 62.34 67.30 51.34 52.42 42.36 26.90 26.02 23.66 22.05 31.41 31.18 22.49 21.30 32.94 11.83 32.75 27.27 75.50 46.87 30 E3_Da KnownBoundary 0 195.44 72.95 78.62 47.91 101.78 129.53 99.15 78.99 56.28 31.91 35.06 48.92 53.89 61.39 33.13 32.38 21.32 21.60 13.37 50.62 34.60 98.28 50.96 31 ER3d ExonRegion 0 268.05 40.96 52.80 29.16 81.38 84.62 84.08 66.78 60.41 35.17 24.60 41.12 19.87 21.67 45.86 22.30 23.18 19.65 8.18 30.24 22.91 87.91 32.48 32 E3_Db KnownBoundary 1 529.65 91.89 75.34 34.49 265.11 135.60 169.72 93.73 67.88 63.69 35.85 36.76 75.16 28.37 104.95 42.98 26.37 23.26 9.22 50.24 40.83 165.09 61.55 33 ER3e ExonRegion 0 188.77 36.93 63.26 45.98 137.51 113.97 122.03 74.07 64.42 59.96 39.58 85.86 46.59 23.69 59.52 44.25 23.85 21.46 15.96 45.08 31.10 147.25 42.51 34 E3_Dc KnownBoundary 0 256.56 31.38 72.82 64.03 175.81 106.25 133.15 94.22 83.10 44.32 29.80 69.62 59.74 31.43 31.28 23.24 26.55 28.48 9.32 47.04 25.51 79.05 31.24 35 ER3f ExonRegion 0 184.94 39.20 48.34 37.07 80.69 68.57 89.08 63.89 49.26 33.26 25.59 75.47 45.68 26.15 25.11 45.09 25.95 31.98 8.50 46.49 31.75 85.56 50.47 36 E3_Dd KnownBoundary 0 32.89 11.84 8.43 0.00 16.55 29.02 24.20 21.07 11.63 11.12 5.37 5.85 0.00 5.00 0.00 0.00 8.79 8.79 0.00 3.20 5.19 6.25 0.00 37 E3_De KnownBoundary 0 135.88 6.38 1.83 4.66 38.79 21.24 62.36 19.84 14.18 8.68 4.58 12.15 0.00 4.77 0.00 8.29 9.54 2.11 4.33 12.27 0.00 16.96 8.19 38 ER3g ExonRegion 0 127.70 16.95 11.85 9.09 71.35 54.40 99.74 48.40 36.64 21.79 13.53 17.32 9.38 17.87 2.90 17.83 14.30 12.32 9.56 14.89 4.41 27.78 17.62 39 ER3h ExonRegion 0 53.71 20.03 15.21 8.64 33.54 30.27 40.46 24.80 15.39 10.53 3.43 13.97 7.72 3.81 7.15 2.33 2.56 2.22 3.30 13.25 1.49 17.45 4.47