Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PMS2	Gene	0	44.24	53.81	82.72	92.38	77.29	110.54	68.15	60.82	71.46	66.09	54.42	65.63	78.47	83.01	63.20	73.87	73.23	55.19	67.27	65.48	22.06	20.84	22.68
2	265849	Transcript	0	0.00	0.00	3.47	2.95	0.00	0.37	0.60	0.00	1.24	2.10	0.00	0.00	0.00	0.00	0.00	0.22	0.17	0.00	0.00	0.74	0.00	0.00	0.00
3	382322	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	380416	Transcript	1	64.99	37.69	52.37	65.54	83.98	45.28	93.74	26.28	21.34	34.76	18.32	52.93	72.21	58.99	68.23	53.62	32.91	20.78	35.46	48.50	9.09	15.53	24.06
5	441476	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	413462	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	469652	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	406569	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	382321	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	415839	Transcript	0	17.31	12.11	26.06	38.06	32.79	17.57	33.34	20.74	20.64	19.86	7.14	21.14	25.82	8.81	16.69	13.98	14.96	4.50	7.51	20.00	2.52	5.54	4.08
11	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.73	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.45	0.33	0.00	0.00	1.49	0.00	0.00	0.00
12	ER1b	ExonRegion	0	0.53	0.00	0.00	0.00	0.00	10.32	5.96	0.00	0.00	0.86	0.00	0.00	0.00	0.00	1.81	2.97	3.30	0.23	0.80	2.13	0.00	0.00	0.00
13	ER1c	ExonRegion	0	12.81	8.19	0.53	3.68	12.37	40.89	34.39	2.48	4.94	7.97	9.77	0.00	0.00	17.91	12.00	22.17	14.45	15.68	30.30	10.93	3.10	2.03	2.38
14	E1_Ad	KnownBoundary	0	34.15	18.42	1.09	5.03	35.74	65.76	67.75	4.23	8.80	14.05	25.69	0.00	0.00	42.38	17.80	46.57	25.53	29.89	61.18	21.41	5.56	7.59	4.35
15	ER1d	ExonRegion	1	56.24	63.43	11.64	27.55	81.93	215.73	129.15	21.15	33.79	29.14	77.78	0.00	1.79	76.49	46.83	126.24	96.04	78.31	142.81	48.94	33.32	18.50	22.65
16	E1a_E2b	KnownJunction	1	67.72	84.06	38.08	44.35	60.78	114.88	63.29	49.41	68.81	35.75	60.23	0.00	0.00	38.26	34.37	117.23	139.41	91.20	105.70	72.42	53.00	27.62	40.38
17	E1a_E3a	NovelJunction	0	14.08	6.25	3.67	7.19	21.14	13.40	8.61	0.00	4.63	3.28	4.69	0.00	0.00	7.24	0.00	3.25	9.07	15.75	21.84	3.20	0.00	0.00	4.27
18	ER1e	ExonRegion	1	58.11	74.32	28.68	35.87	59.11	165.46	82.81	34.18	54.79	35.61	81.53	0.00	4.69	81.43	56.57	137.39	127.98	97.76	124.37	67.60	51.09	25.57	35.64
19	ER2a	ExonRegion	0	1.47	2.60	2.11	1.44	3.79	2.60	3.24	1.01	1.99	0.96	1.83	0.00	0.13	1.99	1.05	3.47	2.93	2.41	2.48	1.71	1.29	0.69	0.90
20	E2_Ab	KnownBoundary	0	0.00	0.00	5.32	4.13	0.00	0.00	4.42	0.00	0.00	1.50	0.00	0.00	0.00	0.00	0.00	0.00	3.83	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2b	ExonRegion	0	29.97	29.38	34.70	22.99	28.87	49.46	41.15	29.16	43.42	23.90	22.48	0.80	4.57	33.94	19.16	62.49	54.99	47.46	40.07	41.94	17.46	11.08	22.95
22	E2_Da	KnownBoundary	0	374.73	181.81	426.77	351.80	260.36	224.59	262.11	275.61	261.20	280.22	289.13	184.41	126.62	126.32	129.30	220.37	249.09	299.46	152.57	233.17	106.94	56.89	84.34
23	ER2c	ExonRegion	1	16.22	20.28	23.68	36.19	13.96	25.67	17.75	29.55	50.09	36.78	83.06	30.56	20.94	48.55	30.82	51.35	105.30	39.24	62.86	49.53	39.95	10.87	14.63
24	E2b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER3a	ExonRegion	0	25.03	57.01	75.52	88.89	64.16	78.05	60.54	71.09	96.41	66.98	80.83	106.25	109.97	128.27	97.51	184.37	136.82	126.88	198.33	110.34	35.41	42.72	51.41
26	E3_Da	KnownBoundary	0	0.00	0.00	0.00	5.86	7.89	0.00	0.00	2.05	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E3a_E4a	KnownJunction	0	0.00	2.50	0.00	1.76	0.00	0.00	0.00	0.00	1.79	1.53	19.79	0.00	0.00	2.47	8.90	0.00	0.00	2.57	9.41	3.26	0.00	0.00	0.00
29	ER3b	ExonRegion	0	27.79	12.90	43.56	64.18	54.09	28.55	57.86	26.43	27.84	27.45	8.61	17.15	23.32	7.22	15.68	21.35	19.42	6.90	9.03	33.77	2.20	2.60	6.46
30	E3_Ab	KnownBoundary	0	0.00	0.00	0.00	6.09	0.00	0.00	0.00	0.00	0.00	1.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER3c	ExonRegion	0	60.88	113.04	87.94	104.18	107.50	219.77	148.50	95.03	107.45	97.15	127.32	107.85	94.31	118.48	65.05	93.42	142.55	91.83	94.66	107.49	40.57	19.71	31.07
32	E3_Db	KnownBoundary	0	29.41	12.76	18.57	28.83	0.00	20.27	17.67	15.94	12.30	8.78	2.42	13.50	14.61	0.00	19.04	16.58	12.53	11.15	22.97	8.25	3.15	2.94	0.00
33	E3b_E4a	KnownJunction	0	9.63	71.50	33.97	44.52	23.51	63.32	28.18	40.13	66.00	65.27	74.12	29.71	74.02	75.34	60.57	42.30	64.05	79.42	62.59	70.50	19.52	8.76	36.71
34	ER3d	ExonRegion	1	22.68	20.82	32.52	48.56	40.48	21.57	38.92	34.78	32.08	31.17	10.98	46.26	54.01	17.24	33.33	17.14	22.52	4.20	11.01	24.52	4.07	13.33	4.87
35	I3	Intron	0	7.31	9.84	12.87	24.98	21.08	15.97	16.83	15.31	13.23	13.46	7.21	19.96	28.29	7.63	11.98	12.73	7.30	7.24	9.70	8.23	3.34	6.62	3.25
36	I3_AR1	ActiveIntronRegion	0	4.43	8.55	16.45	32.63	21.43	14.80	18.52	19.89	17.14	18.97	8.47	23.65	31.93	8.71	14.33	17.86	10.48	10.22	14.07	9.69	5.15	7.75	5.19
37	ER4a	ExonRegion	0	75.18	97.13	97.56	130.16	110.96	132.07	111.00	93.76	114.53	103.23	92.14	116.54	132.49	152.18	95.84	131.10	118.10	120.95	133.47	119.76	40.57	27.96	44.38
38	E4_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E4a_E5a	KnownJunction	0	17.78	66.63	54.20	71.92	115.70	157.75	132.22	55.61	91.55	71.10	75.18	80.43	101.29	149.33	76.15	137.83	110.43	71.38	136.57	95.56	34.10	11.02	36.88
40	ER4b	ExonRegion	1	64.99	37.69	52.37	65.54	83.98	45.28	93.74	26.28	21.34	34.76	18.32	52.93	72.21	58.99	68.23	53.62	32.91	20.78	35.46	48.50	9.09	15.53	24.06
41	E4_Db	NovelBoundary	0	3.70	3.16	22.35	22.08	0.00	0.00	2.25	11.42	11.08	13.05	0.00	0.00	0.00	0.00	5.81	7.60	4.77	23.71	3.86	0.00	0.00	0.00	0.00
42	ER5a	ExonRegion	0	17.06	82.12	68.96	60.59	96.27	155.95	97.02	50.64	80.04	72.78	76.31	83.04	97.27	126.91	67.08	108.60	117.18	84.48	111.62	110.85	35.44	20.50	20.73
43	ER5b	ExonRegion	0	22.53	92.96	71.33	60.26	123.66	168.05	74.80	64.08	82.58	73.81	87.53	93.39	76.05	139.44	78.75	100.63	91.48	91.33	87.83	109.42	27.70	27.38	26.64
44	ER5c	ExonRegion	0	21.57	66.95	58.15	81.09	72.32	121.89	51.57	60.56	88.22	75.12	68.34	82.59	77.48	130.09	66.17	106.28	94.46	78.53	82.79	116.04	23.58	24.50	26.85
45	E5b_E6a	KnownJunction	1	30.38	137.61	70.28	104.35	60.87	147.13	60.81	59.11	90.13	79.16	105.45	123.94	93.18	147.45	27.69	151.33	117.72	122.16	208.66	125.02	42.87	24.00	43.79
46	ER6a	ExonRegion	0	21.12	51.36	56.10	62.86	58.21	112.65	45.23	51.31	77.64	50.21	94.02	89.90	99.73	145.64	92.51	91.07	111.52	87.52	153.84	98.13	31.12	28.83	19.69
47	E6_Da	NovelBoundary	0	3.41	13.42	16.59	24.14	38.46	27.26	17.84	21.44	18.52	11.04	2.68	12.15	6.66	2.35	5.81	26.23	0.00	32.91	8.75	31.77	6.05	0.00	10.16
48	E6a_E7a	KnownJunction	0	15.71	32.89	48.82	50.14	97.62	156.84	66.82	52.70	60.07	39.22	102.24	113.29	131.81	137.68	72.19	80.83	92.75	61.10	93.56	80.73	46.64	26.15	15.96
49	E6a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	I6	Intron	0	11.69	13.66	17.08	34.96	24.76	27.65	17.98	18.20	32.97	18.62	5.10	6.02	18.79	3.95	6.65	10.80	10.35	17.46	25.83	22.97	3.95	3.01	5.26
51	I6_SR1	SilentIntronRegion	0	8.78	11.17	15.02	24.65	20.80	22.03	15.91	14.28	24.52	15.41	3.65	5.59	15.51	4.06	6.32	9.66	7.87	13.63	19.92	20.28	3.72	2.86	4.32
52	I6_AR1	ActiveIntronRegion	0	20.53	21.27	23.41	66.28	36.88	44.78	24.37	30.16	58.66	28.43	9.51	7.35	28.82	3.66	7.70	14.30	17.90	29.16	43.85	31.26	4.68	3.46	8.14
53	E7_Aa	NovelBoundary	0	21.56	22.89	50.44	87.80	44.74	52.24	21.90	27.23	46.99	32.50	2.47	24.31	27.60	4.77	17.80	16.06	30.57	39.88	41.22	24.67	5.99	0.00	0.00
54	ER7a	ExonRegion	0	41.44	75.12	72.84	90.05	113.80	196.11	100.22	65.89	88.19	66.82	103.84	87.59	142.01	158.30	69.49	122.18	115.14	93.53	101.10	104.30	40.00	24.69	27.13
55	E7_Da	NovelBoundary	0	0.00	6.05	17.03	32.46	4.33	0.00	4.11	14.01	29.25	10.56	0.00	0.00	13.64	0.00	0.00	11.79	13.28	6.51	13.08	6.52	0.00	2.57	0.00
56	E7a_E8a	KnownJunction	0	37.71	76.04	50.29	88.67	126.49	172.85	96.27	67.20	84.95	71.08	78.81	70.52	128.56	115.31	48.33	106.72	91.72	80.05	134.31	87.82	29.59	16.29	23.05
57	E8_Aa	NovelBoundary	0	28.89	10.20	11.62	28.04	42.36	27.26	27.07	16.76	16.98	8.92	2.63	0.00	0.00	0.00	0.00	6.75	8.88	1.99	9.41	8.18	9.39	2.63	0.00
58	ER8a	ExonRegion	0	45.22	83.35	74.63	94.95	114.46	190.78	95.11	78.13	99.40	71.94	102.74	134.16	160.90	115.92	83.01	110.95	113.32	92.50	112.24	126.66	33.16	29.66	25.46
59	E8a_E9a	KnownJunction	0	72.31	100.11	107.09	112.01	162.56	178.99	130.59	99.97	106.48	81.23	105.03	140.00	177.91	141.68	99.76	118.77	117.81	73.00	114.73	131.22	43.80	33.92	27.40
60	ER9a	ExonRegion	0	42.32	78.68	87.86	125.15	91.15	181.69	77.18	102.03	102.27	84.64	101.58	119.64	163.58	136.01	66.45	104.20	114.81	84.96	104.42	100.18	33.79	27.21	34.26
61	E9a_E10a	KnownJunction	0	73.79	64.79	91.30	102.48	126.66	291.71	103.34	100.92	118.40	97.24	109.71	123.64	186.68	132.91	119.29	125.52	120.24	82.66	148.43	101.44	40.83	26.09	22.45
62	ER10a	ExonRegion	0	46.48	64.39	91.14	102.79	59.17	143.07	68.70	68.64	98.53	74.23	70.23	77.68	79.70	111.85	65.09	92.29	85.18	107.77	97.71	78.41	28.83	22.97	27.40
63	E10_Da	KnownBoundary	0	105.80	100.38	149.05	205.63	181.15	284.38	149.40	97.72	155.41	124.75	120.29	66.32	107.46	180.53	109.65	141.84	131.65	215.31	184.95	81.17	42.26	52.72	52.24
64	E10a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	ER10b	ExonRegion	0	69.04	92.54	139.38	180.28	134.20	193.20	97.23	117.72	133.75	119.26	98.84	118.33	181.41	132.29	110.84	93.47	129.18	77.53	119.16	105.58	20.94	29.95	23.00
66	E10b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER11a	ExonRegion	1	24.18	60.77	89.80	92.35	107.40	177.35	81.96	63.30	77.49	65.68	29.64	59.17	91.75	53.41	61.13	73.82	36.99	29.52	34.05	31.33	4.66	20.09	13.13
68	E11_Ab	KnownBoundary	0	66.46	52.69	96.89	118.37	82.43	159.23	73.49	69.42	80.64	66.86	42.33	51.47	112.98	58.27	88.26	70.15	82.66	42.74	35.86	56.44	11.92	17.76	12.04
69	E11_Da	KnownBoundary	0	59.27	65.19	159.19	176.70	61.71	132.99	52.51	98.50	72.51	88.13	59.54	120.34	101.29	84.11	75.78	76.48	51.61	47.67	95.16	64.11	20.88	12.74	11.69
70	ER11b	ExonRegion	0	40.99	40.81	161.05	164.86	59.49	117.91	48.99	93.74	90.12	90.03	40.20	53.54	68.32	66.05	62.18	65.88	78.12	48.97	65.94	56.24	19.03	14.45	11.75
71	ER11c	ExonRegion	1	41.54	36.96	155.07	133.80	29.12	90.36	33.59	91.37	66.41	79.74	31.08	97.03	68.60	65.51	76.85	74.65	71.33	29.20	37.41	45.14	19.06	13.32	14.16
72	E11b_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	ER12a	ExonRegion	0	75.90	71.62	209.62	146.30	160.17	126.42	42.50	110.40	106.17	131.34	73.18	57.61	44.90	68.89	70.29	104.26	111.38	44.42	45.83	60.54	43.16	31.44	26.08
74	E12a_E13a	KnownJunction	0	89.28	93.54	207.86	151.73	261.88	188.47	29.28	122.11	102.78	135.73	87.13	59.87	77.11	60.39	65.64	99.03	125.67	47.96	58.83	42.06	40.71	32.27	25.69
75	E12a_E13b	NovelJunction	0	10.37	0.00	13.36	6.16	0.00	0.00	2.21	5.91	3.59	2.50	7.32	12.15	0.00	4.94	4.45	8.72	0.00	2.20	9.60	11.38	4.94	2.33	8.28
76	ER13a	ExonRegion	0	106.35	123.63	257.52	168.41	162.92	179.00	39.36	151.08	109.28	156.68	64.05	48.21	42.32	80.87	69.89	138.95	129.41	22.26	18.24	58.80	44.52	28.41	27.56
77	E13_Ab	KnownBoundary	0	172.85	204.83	217.14	131.75	210.53	241.74	62.53	112.05	86.05	120.64	71.49	96.03	47.89	173.41	165.15	229.43	162.79	6.63	4.52	98.62	60.17	33.49	48.23
78	ER13b	ExonRegion	0	62.28	107.98	208.62	127.09	104.02	152.53	42.23	131.62	88.68	115.69	65.57	53.14	30.02	84.98	73.33	130.40	94.32	4.02	0.00	69.79	39.67	21.77	32.16
79	E13_Da	KnownBoundary	1	21.93	45.45	85.33	58.23	23.09	73.20	51.27	64.24	49.85	55.98	6.84	7.65	0.00	2.47	4.94	0.00	33.29	4.93	3.86	8.88	15.57	0.00	12.63
80	ER13c	ExonRegion	0	21.73	11.92	99.20	55.20	47.32	139.43	43.40	58.73	53.83	78.95	28.18	14.30	5.78	31.03	31.10	34.73	59.11	22.11	20.96	35.25	21.17	20.84	17.48
81	E13b_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
82	ER14a	ExonRegion	0	1.97	4.18	109.30	104.92	30.77	40.00	10.38	42.83	56.46	57.32	6.86	14.40	14.59	54.04	65.14	41.63	13.30	6.92	4.40	14.97	15.36	25.91	30.88
83	E14_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
84	ER14b	ExonRegion	0	61.88	31.46	115.19	106.33	89.48	136.52	43.29	20.26	46.68	65.10	0.00	0.00	0.03	41.57	48.23	0.02	0.00	0.00	0.00	0.00	15.97	21.05	17.17
85	ER14c	ExonRegion	0	0.00	0.00	6.94	5.91	0.00	0.00	0.00	0.00	2.47	4.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00