Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNX8 Gene 0 26.05 8.70 45.10 25.28 16.98 28.68 15.87 21.46 29.38 18.60 258.59 42.26 33.44 152.58 190.46 157.91 81.33 28.01 20.21 13.41 62.51 43.47 66.69 2 447136 Transcript 0 3.58 6.23 9.06 6.51 2.85 1.40 3.66 3.58 5.20 3.40 2.07 2.19 3.56 2.78 6.29 8.48 7.25 6.85 6.82 5.10 2.98 0.80 5.70 3 435336 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 4 222990 Transcript 0 11.66 7.89 43.35 26.95 16.04 30.78 9.61 20.20 28.69 19.64 197.72 45.25 34.25 143.85 181.29 170.06 51.24 26.54 18.50 9.51 41.03 39.73 70.62 5 494722 Transcript 0 2.13 1.16 2.81 1.93 0.00 1.15 3.07 0.49 2.38 1.44 4.64 0.00 0.00 4.42 8.40 9.03 3.34 5.87 1.03 0.28 4.22 0.71 5.31 6 435060 Transcript 0 1.14 1.46 0.64 0.36 1.44 0.66 1.70 0.04 0.67 0.00 0.35 1.28 2.01 1.18 3.40 3.20 0.65 0.83 1.14 1.15 3.48 0.02 3.69 7 419693 Transcript 0 2.66 0.72 2.51 0.46 3.67 1.68 3.18 1.18 1.47 1.37 13.63 8.64 1.36 1.66 3.05 9.16 3.61 0.68 0.73 0.49 1.26 0.71 0.67 8 457286 Transcript 0 0.58 0.00 0.00 0.00 0.73 1.51 1.09 0.70 0.50 0.00 0.58 1.19 0.00 0.00 4.21 1.63 2.72 0.00 0.00 0.58 1.81 0.01 0.81 9 479689 Transcript 0 1.29 0.00 0.05 0.22 1.05 2.90 0.00 0.83 0.00 0.93 2.83 3.20 0.00 1.58 2.14 4.61 0.00 0.86 0.00 1.57 3.13 1.33 3.49 10 480807 Transcript 0 0.69 0.10 1.76 0.66 0.38 0.72 1.10 1.66 2.88 1.75 7.71 1.07 2.05 5.49 9.75 11.12 3.11 1.78 0.36 1.26 3.59 2.28 8.92 11 ER1a ExonRegion 0 0.21 2.44 0.00 0.14 4.82 2.20 1.19 0.52 0.25 0.11 1.74 0.00 0.00 0.16 0.00 0.00 0.00 3.33 0.64 1.28 1.76 0.00 0.00 12 ER1b ExonRegion 0 5.62 2.10 4.73 1.79 29.00 9.38 6.83 7.07 6.27 2.49 6.60 0.00 2.26 4.35 3.60 18.21 4.36 15.02 9.81 12.25 5.17 1.22 9.49 13 E1a_E2a KnownJunction 0 6.67 0.00 12.03 1.90 0.00 0.00 0.00 5.67 10.30 1.67 0.00 0.00 0.00 0.00 0.00 16.06 8.04 15.55 9.32 2.75 0.00 0.00 4.35 14 E1a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 15 E2_Aa NovelBoundary 1 0.00 2.43 21.35 22.24 3.48 0.00 7.77 2.05 3.94 10.07 0.00 0.00 15.10 2.24 19.90 11.62 4.77 8.87 4.80 9.27 3.09 3.12 24.50 16 ER2a ExonRegion 0 7.45 22.48 24.21 23.99 6.58 3.39 13.43 8.13 10.24 11.81 6.53 8.76 14.24 10.95 25.17 17.85 20.98 8.53 17.33 16.38 10.16 3.21 18.45 17 E2_Da NovelBoundary 0 14.52 25.19 51.09 100.32 20.46 2.56 16.43 21.85 14.24 18.16 0.00 6.30 6.66 0.00 14.71 28.71 11.50 28.31 13.18 3.00 11.55 8.57 32.52 18 E2a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 0.88 0.00 0.00 0.00 0.00 0.76 0.22 0.00 0.00 0.81 2.82 0.00 0.00 0.74 9.67 2.48 1.10 0.69 0.00 0.00 1.47 0.87 2.57 20 ER3b ExonRegion 1 35.27 10.29 7.60 2.16 14.02 39.52 20.95 5.15 12.01 3.53 108.38 2.03 1.91 52.62 106.22 103.95 57.96 12.02 11.70 4.35 39.32 22.84 40.28 21 E3a_E7a KnownJunction 1 64.83 10.79 20.64 11.22 21.99 42.76 18.24 22.47 17.48 15.96 180.84 11.55 6.49 108.66 101.61 213.19 43.85 36.77 26.45 5.31 19.34 27.49 70.85 22 E4_Aa NovelBoundary 0 14.15 3.35 9.25 1.60 0.00 0.00 3.44 11.21 4.54 3.33 5.32 0.00 6.82 2.47 23.24 3.42 4.77 6.63 0.00 2.88 8.77 0.00 11.52 23 ER4a ExonRegion 0 2.28 2.92 1.29 0.73 2.88 1.32 3.39 0.07 1.34 0.00 0.71 2.56 4.03 2.37 6.80 6.40 1.30 1.65 2.29 2.29 6.97 0.04 7.38 24 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E5_Aa NovelBoundary 1 3.56 3.03 9.20 2.70 0.00 0.00 10.60 1.64 5.21 2.44 7.48 24.46 34.09 9.83 0.00 3.16 8.32 0.00 4.52 0.00 6.24 3.00 7.60 26 ER5a ExonRegion 0 5.32 1.45 5.01 0.93 7.34 3.36 6.36 2.36 2.95 2.75 16.62 10.97 2.71 3.31 6.10 13.97 3.67 1.35 1.46 0.97 2.51 1.43 1.34 27 E5_Da NovelBoundary 0 18.30 3.29 0.00 1.66 0.00 0.00 15.85 0.00 0.00 1.42 2.47 0.00 0.00 2.35 0.00 8.20 9.44 0.00 0.00 3.07 6.05 0.00 11.52 28 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.63 6.30 0.00 0.00 0.00 4.36 3.55 0.00 0.00 0.00 0.00 0.00 0.00 29 ER6a ExonRegion 0 1.16 0.00 0.00 0.00 1.47 3.02 2.18 1.39 1.01 0.00 1.16 2.37 0.00 0.00 8.42 3.26 5.43 0.00 0.00 1.17 3.63 0.02 1.61 30 E6_Da NovelBoundary 0 2.89 5.92 19.16 2.06 11.04 0.00 9.76 7.11 3.12 1.64 2.00 6.30 0.00 0.00 14.22 18.46 0.00 4.60 0.00 2.62 5.07 0.00 8.71 31 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER7a ExonRegion 0 15.17 6.45 38.83 17.50 8.35 13.64 7.98 18.94 29.18 16.58 366.86 28.32 29.39 183.92 197.86 212.69 99.41 35.21 23.28 11.95 79.96 59.72 79.24 33 E7_Da NovelBoundary 1 12.74 8.62 38.41 29.33 3.82 21.24 15.15 33.76 29.80 22.19 214.42 58.67 44.48 164.99 213.61 300.35 55.07 38.72 32.28 18.98 68.76 81.62 112.34 34 E7b_E8a KnownJunction 0 14.45 3.16 44.94 44.85 15.11 60.08 10.16 40.38 47.19 39.51 405.89 24.16 42.04 222.85 194.20 394.17 125.67 42.90 25.51 23.33 93.72 74.77 135.39 35 ER7b ExonRegion 0 19.96 6.25 44.99 41.47 13.19 46.76 11.16 38.40 45.17 33.83 394.31 51.03 55.28 254.99 304.22 400.81 112.47 44.08 36.18 25.84 104.99 102.99 151.45 36 ER8a ExonRegion 0 29.58 12.36 67.01 34.22 40.70 75.80 37.37 29.51 39.01 32.21 470.39 70.33 51.34 263.36 243.12 224.45 144.20 43.89 28.31 24.13 127.20 67.39 77.38 37 E8_Da KnownBoundary 0 0.00 3.29 8.07 0.00 0.00 0.00 3.71 4.64 0.00 0.00 7.21 0.00 0.00 2.35 5.19 3.08 0.00 1.95 0.00 0.00 2.66 0.00 0.00 38 E8_Db KnownBoundary 0 0.00 0.00 0.00 1.47 0.00 2.21 2.25 0.00 1.22 2.61 0.00 0.00 0.00 2.41 9.64 0.00 4.77 0.00 0.00 0.00 3.15 0.00 7.43 39 E8b_E9a KnownJunction 0 49.79 21.77 82.17 33.60 44.82 84.95 42.26 15.57 31.22 44.46 519.13 72.77 76.62 284.60 357.25 272.24 139.97 42.99 31.72 26.33 124.54 87.20 80.33 40 ER8b ExonRegion 0 31.22 20.34 72.60 43.95 29.43 74.27 38.73 20.31 33.35 44.16 527.20 77.93 71.52 297.21 317.69 260.06 137.81 51.74 34.24 30.32 142.14 69.80 80.76 41 ER8c ExonRegion 0 2.13 1.16 2.81 1.93 0.00 1.15 3.07 0.49 2.38 1.44 4.64 0.00 0.00 4.42 8.40 9.03 3.34 5.87 1.03 0.28 4.22 0.71 5.31 42 ER9a ExonRegion 0 47.04 15.68 64.27 46.05 22.67 39.60 31.32 33.80 51.61 44.99 510.59 76.34 54.00 319.59 349.03 294.63 185.63 50.59 22.38 25.28 115.78 98.39 128.13 43 E9_Ab KnownBoundary 0 49.56 13.88 90.56 37.86 14.52 9.99 19.87 52.08 59.03 46.85 440.06 68.42 39.77 345.58 378.27 305.65 190.84 51.28 14.02 14.19 91.31 116.22 143.15 44 ER9b ExonRegion 0 48.63 14.10 76.93 35.58 12.80 20.65 18.91 39.19 46.75 36.00 498.77 57.79 52.20 357.02 360.39 282.22 148.04 41.78 25.21 17.53 109.42 84.07 111.21 45 E9a_E10a KnownJunction 0 53.42 15.00 73.06 36.69 11.88 54.51 24.16 36.43 44.91 35.54 499.97 94.68 67.37 287.54 275.30 246.86 167.93 40.25 16.38 26.40 108.30 58.54 87.67 46 ER10a ExonRegion 0 61.93 13.06 77.46 35.52 21.74 64.41 38.22 42.96 60.51 52.35 665.11 119.41 87.26 380.44 419.97 320.55 198.30 62.55 49.59 29.71 137.55 93.99 158.11 47 E10a_E11a KnownJunction 0 49.12 22.23 87.70 41.75 40.83 82.23 27.65 53.72 55.03 52.09 533.82 192.66 94.64 288.84 402.25 336.41 148.85 62.01 32.85 15.92 79.45 79.42 93.47 48 ER11a ExonRegion 0 47.90 17.98 77.26 38.73 49.99 92.85 31.84 42.94 58.05 42.62 522.19 160.87 86.64 330.21 364.49 287.20 169.21 65.94 21.63 16.91 76.32 75.99 105.87 49 ER11b ExonRegion 0 56.79 13.76 96.10 41.64 49.42 97.35 34.79 39.72 53.45 34.65 543.10 112.20 91.80 341.17 335.19 251.56 165.12 48.32 32.12 23.68 103.06 83.39 137.83 50 E11_Db KnownBoundary 0 93.79 12.17 95.80 36.49 38.12 100.11 39.61 43.87 50.29 24.69 529.19 73.52 103.89 356.64 442.92 275.31 161.76 32.00 43.39 24.16 103.60 76.79 145.89 51 E11_Dc KnownBoundary 0 66.23 21.77 71.49 46.88 23.85 36.97 23.49 45.18 33.97 23.93 280.60 128.29 87.98 290.07 187.53 244.81 111.64 34.66 49.13 17.26 90.94 59.03 91.00 52 ER11c ExonRegion 0 72.43 12.80 97.85 50.78 37.76 60.72 33.88 42.32 51.10 30.88 434.04 100.54 105.96 374.39 364.16 283.45 146.95 40.31 50.14 21.91 111.41 73.62 120.08 53 ER11d ExonRegion 0 74.92 15.52 95.98 69.91 20.97 50.73 36.68 46.72 68.19 32.64 451.84 92.26 71.39 377.39 387.02 287.51 139.27 62.23 48.11 22.43 121.85 109.17 131.20 54 E11_Dd NovelBoundary 0 15.11 0.00 0.00 0.00 0.00 0.00 2.25 4.39 4.54 4.49 0.00 0.00 0.00 4.94 0.00 7.78 7.95 1.87 0.00 0.00 0.00 0.00 7.51 55 E11d_E12a KnownJunction 0 117.58 8.29 100.09 86.50 34.55 54.85 44.87 56.44 87.79 43.03 610.52 96.78 98.05 410.91 567.40 379.22 206.26 80.09 52.61 15.47 160.99 142.98 147.85 56 E11d_E13a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.05 0.00 0.00 11.48 10.26 3.67 0.00 0.00 7.91 0.00 0.00 0.00 0.00 57 ER12a ExonRegion 0 61.12 16.04 97.69 58.50 31.61 55.00 33.61 37.18 59.53 36.74 506.20 107.81 70.49 345.82 372.17 298.15 184.78 58.03 39.30 19.63 126.49 80.63 122.59 58 E12a_E13a KnownJunction 0 38.01 11.51 123.00 73.82 65.62 82.40 31.93 51.79 77.95 32.53 534.66 161.15 98.86 381.78 498.92 344.95 216.64 68.48 52.71 23.97 163.28 79.24 138.29 59 ER13a ExonRegion 0 43.28 11.11 123.66 68.97 54.25 77.02 33.66 55.44 74.45 44.80 587.41 99.64 92.37 353.59 469.58 420.15 169.21 70.59 48.01 28.40 142.79 110.25 150.15 60 E13_Da KnownBoundary 0 7.11 0.00 0.00 1.37 4.33 5.56 0.00 6.37 0.00 3.81 0.00 0.00 0.00 7.06 8.90 8.37 0.00 2.57 0.00 0.00 8.40 2.33 4.35 61 E13a_E14b KnownJunction 0 19.41 18.02 125.96 71.69 42.19 84.10 26.10 54.05 74.02 52.49 505.86 129.19 94.64 354.47 433.53 461.59 141.75 73.54 43.20 25.89 105.82 108.20 186.26 62 ER13b ExonRegion 0 1.29 0.00 0.05 0.22 1.05 2.90 0.00 0.83 0.00 0.93 2.83 3.20 0.00 1.58 2.14 4.61 0.00 0.86 0.00 1.57 3.13 1.33 3.49 63 ER14a ExonRegion 0 0.69 0.10 1.76 0.66 0.38 0.72 1.10 1.66 2.88 1.75 7.71 1.07 2.05 5.49 9.75 11.12 3.11 1.78 0.36 1.26 3.59 2.28 8.92 64 E14_Ab KnownBoundary 0 3.41 0.00 1.83 0.00 0.00 0.00 2.21 4.52 3.96 3.12 0.00 0.00 6.82 0.00 5.19 12.99 0.00 4.31 0.00 0.00 2.47 0.00 3.50 65 ER14b ExonRegion 0 42.12 11.03 121.43 51.64 32.13 51.30 20.83 59.67 68.88 41.23 592.76 99.11 77.28 305.00 485.11 383.76 166.79 69.15 39.51 27.85 137.75 90.04 167.41 66 E14a_E15a KnownJunction 0 37.93 15.46 129.77 54.41 29.12 16.69 26.72 60.99 63.54 33.87 435.48 81.48 54.54 212.55 194.08 401.09 106.03 73.08 30.49 21.92 114.47 84.62 159.89 67 ER15a ExonRegion 0 50.37 11.60 94.96 55.84 24.63 49.01 19.09 50.40 61.48 33.71 550.46 76.23 56.87 260.99 448.01 322.46 151.78 44.65 35.74 23.22 126.42 89.42 124.94 68 E15a_E16a KnownJunction 0 55.42 9.27 83.82 36.66 11.63 48.95 19.70 50.27 45.51 27.86 416.58 71.42 38.96 205.84 272.08 218.40 95.00 29.47 52.71 18.34 83.21 73.05 108.33 69 ER16a ExonRegion 0 36.13 11.28 57.46 41.16 19.97 35.32 11.34 23.55 38.55 14.37 231.77 36.23 37.48 149.62 224.51 175.01 80.54 25.30 26.37 17.97 60.08 48.16 87.78 70 E16_Da KnownBoundary 0 45.79 26.44 40.21 28.90 20.37 38.22 14.18 37.09 43.14 17.25 190.05 12.60 35.87 150.51 233.02 139.45 34.22 20.77 27.58 6.01 40.28 32.94 81.27 71 ER16b ExonRegion 0 14.70 5.66 4.11 9.17 5.93 7.48 2.50 6.54 12.05 5.61 84.47 6.55 8.11 76.33 100.68 46.11 10.88 5.39 12.31 2.65 15.78 10.14 23.02 72 IG33 Intergenic 0 5.06 3.71 27.42 16.95 7.20 26.32 7.64 10.56 17.51 11.20 45.90 5.08 1.27 47.26 40.57 47.39 17.67 12.00 10.00 5.92 27.08 16.89 35.04 73 IG33_AR1 ActiveIntergenicRegion 0 5.07 3.71 27.45 16.97 7.21 26.35 7.65 10.57 17.53 11.21 45.96 5.09 1.27 47.31 40.62 47.45 17.69 12.02 10.02 5.93 27.11 16.91 35.08