Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SP4 Gene 0 28.20 94.86 27.79 56.69 78.85 79.87 53.57 56.16 34.15 58.88 43.89 126.17 97.79 52.82 30.04 27.87 35.32 45.27 25.41 61.91 12.33 30.83 18.38 2 446800 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 222584 Transcript 0 25.21 48.45 19.74 27.39 46.06 43.05 35.50 39.07 24.20 42.87 49.03 99.02 79.32 58.72 17.70 28.43 43.64 68.21 33.25 69.81 18.90 25.32 17.40 4 432066 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 448246 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 440636 Transcript 0 1.90 0.90 1.35 0.00 0.00 0.87 0.63 0.00 1.74 2.29 1.88 9.06 5.47 0.54 1.93 0.00 0.70 2.60 3.48 6.50 0.00 2.95 2.34 7 ER1a ExonRegion 0 0.00 1.42 0.00 0.00 0.00 0.00 1.72 0.00 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 2.65 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1c ExonRegion 0 2.14 4.70 0.00 2.06 0.90 19.15 3.45 1.79 0.91 2.29 2.57 0.83 0.22 7.02 1.29 7.09 2.23 3.70 2.07 7.33 1.49 0.70 2.00 10 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 9.99 0.00 0.00 2.89 0.00 5.37 11.10 0.00 2.12 0.00 0.00 0.00 4.77 0.00 2.43 0.00 0.00 0.00 11 ER1d ExonRegion 0 2.96 17.24 3.54 0.35 9.56 22.97 13.62 3.98 9.27 6.39 16.66 8.45 18.98 19.72 5.25 5.99 15.77 14.90 4.55 21.41 5.18 2.94 7.83 12 E1a_E2a KnownJunction 0 0.00 45.65 9.14 3.00 15.28 42.99 29.28 13.72 12.36 18.78 14.53 19.51 40.74 18.95 19.28 11.45 26.18 40.91 4.42 36.05 11.43 2.39 7.51 13 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 1.33 18.79 6.91 12.47 4.61 24.55 13.23 15.66 17.55 24.37 24.44 32.99 30.08 34.41 11.18 23.11 30.76 39.46 17.57 50.02 8.07 7.08 14.25 15 E2_Da KnownBoundary 0 0.00 0.00 3.10 0.00 0.00 0.00 0.00 0.00 0.00 4.49 2.00 17.41 12.34 2.41 0.00 0.00 7.95 0.00 22.87 8.82 0.00 0.00 4.01 16 E2a_E3a KnownJunction 0 0.00 20.79 11.12 18.15 3.99 51.56 12.32 25.75 22.08 43.38 61.07 81.33 68.34 68.57 22.50 36.40 49.09 82.53 9.13 97.41 13.59 19.84 10.33 17 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER2b ExonRegion 0 1.90 0.90 1.35 0.00 0.00 0.87 0.63 0.00 1.74 2.29 1.88 9.06 5.47 0.54 1.93 0.00 0.70 2.60 3.48 6.50 0.00 2.95 2.34 19 ER3a ExonRegion 0 6.69 13.32 10.80 19.28 9.41 59.21 16.62 26.96 23.28 47.17 37.01 77.03 94.77 62.28 20.88 29.62 46.55 67.96 28.63 72.02 18.59 29.12 20.96 20 E3_Da KnownBoundary 1 15.63 21.84 15.49 31.80 25.38 42.42 26.01 35.45 25.72 56.97 72.44 72.17 108.92 60.92 4.45 51.95 82.19 91.40 48.38 90.89 10.50 33.13 15.88 21 E3a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3b ExonRegion 1 5.31 27.18 14.45 21.63 41.19 45.02 29.63 28.39 31.78 46.86 80.88 129.64 115.67 70.13 11.69 38.47 69.18 91.76 56.26 103.93 28.09 39.91 17.45 23 E3_Ab KnownBoundary 1 0.00 42.43 10.14 17.38 34.72 9.26 23.10 18.03 22.42 39.03 71.86 96.93 86.36 76.11 8.90 21.28 41.42 81.12 23.81 94.21 34.47 31.90 13.66 24 ER3c ExonRegion 1 12.02 53.66 10.97 18.54 25.93 54.57 26.48 40.14 30.30 47.43 75.33 176.70 169.12 71.51 11.83 41.42 54.68 61.71 27.18 95.87 14.07 31.97 19.02 25 E3_Db KnownBoundary 1 13.93 87.42 11.00 29.93 41.68 64.68 23.85 53.81 39.81 54.96 74.44 259.13 80.68 65.45 8.90 50.33 69.00 67.98 21.37 102.08 11.80 20.70 11.61 26 ER3d ExonRegion 1 9.52 50.55 14.95 27.29 35.61 70.89 38.59 41.84 34.40 54.05 69.29 145.71 126.70 81.72 15.43 49.19 63.85 100.78 36.38 93.20 24.82 29.04 25.54 27 E3c_E4a KnownJunction 0 23.49 22.30 5.82 19.05 22.84 28.90 42.48 28.59 18.84 36.61 38.69 69.17 46.75 71.40 19.28 20.68 39.64 75.36 30.78 72.48 21.87 14.08 24.93 28 I3_AR4 ActiveIntronRegion 0 31.07 11.39 4.94 6.41 13.44 2.95 5.37 9.45 2.96 5.49 0.12 6.71 3.98 0.52 5.04 1.91 1.91 1.36 2.26 3.42 0.00 0.94 1.49 29 I3_SR5 SilentIntronRegion 0 17.58 4.71 2.82 3.13 10.86 1.77 5.63 2.99 1.07 2.97 0.75 11.36 9.11 0.74 3.00 2.30 1.28 0.89 1.85 1.23 0.00 0.40 0.00 30 ER4a ExonRegion 1 15.18 54.51 13.37 26.61 33.87 59.30 42.71 28.67 26.04 46.19 66.92 81.65 74.70 80.56 14.90 39.28 48.48 88.68 24.90 78.24 31.37 15.82 18.54 31 E4_Da KnownBoundary 1 10.89 60.32 18.69 27.04 30.98 91.20 26.85 32.57 32.67 40.21 81.49 85.68 62.50 75.05 24.11 12.39 52.27 48.21 8.28 108.28 27.00 34.05 29.88 32 ER4b ExonRegion 0 7.66 44.21 16.65 34.51 42.93 71.80 41.79 29.36 27.19 43.29 63.93 102.14 100.62 78.79 20.75 22.52 38.71 60.25 12.31 81.72 21.60 22.22 19.80 33 E4b_E5a KnownJunction 1 14.30 54.20 14.52 45.12 22.58 116.24 39.70 30.31 24.42 45.88 57.17 94.53 145.12 125.85 15.70 26.75 38.24 69.97 8.09 98.88 17.92 19.78 13.83 34 ER5a ExonRegion 1 11.88 54.68 15.50 40.25 52.61 78.84 51.43 37.18 37.20 40.30 67.80 123.15 82.87 78.57 16.62 39.05 56.41 77.31 35.77 74.36 11.35 30.37 29.01 35 E5a_E6a KnownJunction 0 18.74 119.58 10.29 49.94 76.15 91.94 51.54 23.37 29.02 42.84 63.75 132.64 52.76 84.35 23.73 54.43 63.21 76.40 39.34 65.90 20.82 43.17 50.28 36 ER6a ExonRegion 0 39.07 131.61 37.36 81.07 112.47 98.89 70.13 72.43 40.16 71.95 37.20 140.47 101.48 46.27 41.94 22.69 27.41 27.18 24.21 55.75 8.61 36.56 18.11 37 E6_Da KnownBoundary 0 46.60 61.37 22.06 41.15 128.44 11.87 28.88 20.04 6.89 22.70 4.79 43.06 6.17 9.18 26.70 4.36 0.00 5.47 3.95 2.49 0.00 26.88 0.00 38 ER6b ExonRegion 0 62.51 93.75 43.75 41.59 84.60 27.40 31.32 57.47 11.77 33.95 7.25 51.53 28.18 11.62 24.39 5.39 1.88 4.94 9.57 9.65 0.84 18.23 1.68