Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NFE2L3 Gene 0 91.89 48.12 72.68 129.83 112.95 286.32 127.24 93.89 59.63 74.10 84.44 116.47 179.74 106.78 108.91 51.45 130.35 26.34 22.39 53.14 9.18 16.12 19.06 2 56233 Transcript 0 59.87 40.46 80.13 143.89 61.00 219.75 79.08 99.25 63.58 104.20 110.17 85.19 157.27 143.77 98.99 74.86 187.25 34.13 29.81 27.54 17.10 17.53 27.84 3 ER1a ExonRegion 0 3.51 3.67 8.23 4.27 3.56 29.16 4.00 6.49 6.32 13.99 18.37 4.76 6.23 40.86 26.37 14.82 35.16 6.61 3.33 3.76 6.48 1.33 6.03 4 E1a_E2a KnownJunction 0 27.71 34.40 41.13 60.53 20.63 144.63 21.33 41.53 27.69 64.93 56.49 5.25 27.11 120.55 54.64 45.12 114.54 42.86 9.41 9.46 11.98 12.25 12.55 5 I1 Intron 0 8.45 6.50 10.43 37.63 16.18 12.94 29.56 7.99 11.43 7.28 3.28 4.42 6.47 2.27 4.61 1.86 6.54 8.39 1.14 10.67 0.13 2.14 0.59 6 I1_AR1 ActiveIntronRegion 0 7.02 10.61 19.92 63.77 16.65 18.08 37.96 15.79 29.43 14.90 5.46 5.29 5.39 3.28 4.96 2.45 12.46 32.62 0.00 22.62 0.00 3.81 0.00 7 I1_SR2 SilentIntronRegion 0 12.45 10.37 14.64 66.10 28.38 19.18 53.88 9.58 19.06 11.16 4.42 7.51 9.98 4.05 5.87 2.37 6.07 12.15 1.76 19.46 0.24 4.40 0.87 8 I1_AR2 ActiveIntronRegion 0 31.95 37.26 44.17 183.09 58.26 60.83 122.60 36.57 45.27 23.18 12.00 20.21 27.32 7.64 12.40 4.11 9.58 27.87 7.25 55.87 0.32 4.26 2.97 9 I1_SR3 SilentIntronRegion 0 17.73 9.96 22.37 70.59 26.86 20.43 42.01 16.20 18.08 9.22 8.14 10.11 14.18 3.85 7.77 4.11 4.14 7.83 4.36 19.92 0.37 4.53 3.46 10 E2_Aa NovelBoundary 0 16.37 14.54 51.18 94.93 23.60 23.62 96.76 38.69 22.74 14.18 0.00 12.75 21.91 10.95 13.35 0.00 8.60 6.09 8.47 32.92 0.00 2.27 3.41 11 ER2a ExonRegion 0 58.00 40.80 96.23 178.37 73.11 282.27 104.52 87.56 68.08 97.86 122.72 90.53 179.11 153.43 104.06 74.29 195.34 44.91 27.54 41.24 19.92 17.10 24.78 12 E2_Da NovelBoundary 0 48.45 12.76 52.22 115.94 63.41 25.55 90.40 24.97 30.24 27.43 14.85 0.00 6.98 7.59 10.75 4.27 4.30 19.36 21.93 52.54 0.00 3.06 4.35 13 E2a_E3a KnownJunction 0 123.43 67.22 139.68 306.39 73.34 220.27 92.39 192.56 102.37 202.24 213.48 133.99 306.15 231.03 143.03 176.62 281.72 64.75 100.14 18.66 33.85 35.45 90.66 14 I2 Intron 0 9.54 8.45 12.35 41.94 15.29 15.80 39.40 9.74 11.83 6.29 5.87 5.95 6.75 3.60 6.61 2.82 6.49 13.09 2.92 22.84 0.82 1.87 1.39 15 I2_SR1 SilentIntronRegion 0 12.51 8.25 14.43 47.89 14.06 16.55 38.86 13.75 12.33 8.96 7.04 3.85 4.99 3.71 7.91 4.87 8.39 16.42 2.98 27.05 1.30 1.62 3.21 16 I2_AR1 ActiveIntronRegion 0 12.95 9.81 22.63 45.86 12.91 18.23 17.06 12.71 6.18 8.43 1.59 0.00 0.00 9.84 13.82 0.00 8.54 26.63 0.00 28.91 2.72 0.00 0.00 17 I2_AR2 ActiveIntronRegion 0 10.87 7.39 19.05 61.14 11.19 17.50 15.47 13.28 6.29 7.56 5.80 0.00 0.00 8.27 7.65 1.76 6.90 33.93 0.00 30.56 0.00 0.66 0.00 18 I2_AR3 ActiveIntronRegion 0 7.89 5.18 15.93 69.01 9.00 17.17 25.28 13.83 10.44 7.82 9.66 0.00 0.00 8.12 5.80 2.97 4.80 39.98 0.00 32.30 0.00 2.08 2.94 19 I2_AR4 ActiveIntronRegion 0 6.75 6.55 9.29 46.95 8.33 11.15 32.86 12.32 13.24 7.46 4.33 2.75 2.98 4.14 8.73 3.62 7.30 23.89 0.82 25.99 0.57 0.97 0.29 20 I2_SR2 SilentIntronRegion 0 7.43 7.44 11.28 37.81 13.98 12.30 34.82 7.64 9.92 5.68 5.08 6.59 4.76 2.92 4.93 1.47 6.04 10.14 2.83 19.14 0.56 1.54 1.02 21 I2_AR5 ActiveIntronRegion 0 11.87 12.46 18.21 51.96 22.04 21.77 58.43 9.10 17.38 6.01 6.78 9.79 15.07 3.02 7.84 4.02 7.20 8.95 4.63 23.43 1.33 2.16 1.22 22 I2_SR3 SilentIntronRegion 0 10.60 9.43 6.10 21.46 19.35 20.07 35.60 5.73 9.90 1.90 7.53 4.77 10.80 4.87 4.49 1.10 3.06 5.97 1.18 20.12 0.41 4.64 0.54 23 I2_AR7 ActiveIntronRegion 0 8.30 5.98 7.16 25.89 22.31 23.38 44.80 7.58 3.61 3.35 3.79 12.99 5.68 4.31 5.61 0.00 1.62 8.56 9.37 21.91 0.00 2.04 1.44 24 E3_Aa NovelBoundary 0 16.74 5.92 6.71 38.16 16.30 33.28 49.55 16.14 7.29 7.79 15.16 18.91 27.27 4.71 8.78 8.54 4.68 0.00 4.80 35.67 0.00 2.88 0.00 25 ER3a ExonRegion 0 45.66 34.40 109.52 198.58 64.73 252.04 94.11 139.02 83.36 156.55 136.11 146.22 229.98 186.00 121.06 86.26 284.15 38.16 30.56 30.14 27.21 22.12 30.83 26 E3_Da NovelBoundary 0 17.34 6.45 15.79 56.14 15.87 27.54 45.27 19.47 7.75 7.71 12.69 26.26 19.48 7.65 4.45 0.00 21.32 9.16 0.00 23.97 0.00 2.63 0.00 27 E3a_E4a KnownJunction 0 36.75 39.47 75.66 94.69 39.39 239.92 67.92 106.79 81.91 104.84 122.82 62.57 118.66 152.45 108.54 66.48 248.53 10.65 9.79 19.05 11.55 13.90 7.60 28 I3 Intron 0 29.47 26.96 29.10 72.37 64.32 57.05 72.67 39.58 25.64 17.17 10.27 22.14 21.67 11.96 20.53 5.77 15.05 6.13 7.79 42.76 0.19 5.08 2.73 29 I3_AR1 ActiveIntronRegion 0 29.57 27.05 29.20 72.60 64.53 57.23 72.90 39.71 25.73 17.23 10.30 22.22 21.74 12.00 20.60 5.79 15.10 6.15 7.82 42.90 0.19 5.10 2.74 30 E4_Aa NovelBoundary 0 144.84 22.50 87.49 179.80 82.43 166.27 168.26 130.41 44.10 42.28 30.90 18.16 37.01 24.13 24.48 18.80 37.59 35.03 38.12 73.50 0.00 19.59 3.59 31 ER4a ExonRegion 0 124.00 63.28 90.45 164.37 152.25 369.92 169.30 120.82 75.32 89.00 101.23 153.02 233.63 122.06 135.23 60.45 151.29 30.98 27.86 70.50 8.71 20.58 22.44 32 IG34 Intergenic 0 20.14 24.64 15.46 47.09 43.11 73.68 80.03 36.92 40.48 22.71 24.00 39.21 37.73 25.32 19.73 15.60 30.70 36.31 21.74 75.43 5.12 9.73 18.42 33 IG34_SR1 SilentIntergenicRegion 0 26.06 11.81 8.39 37.07 42.94 80.73 63.74 36.95 33.24 10.19 14.17 19.02 26.68 22.73 13.82 11.90 14.21 16.48 16.81 52.48 1.93 5.55 13.40 34 IG34_AR2 ActiveIntergenicRegion 0 40.92 23.05 3.68 20.44 42.25 84.51 59.85 10.37 13.59 8.03 14.01 20.02 40.84 17.26 12.09 15.11 11.83 19.32 44.99 56.74 2.20 4.17 12.24 35 IG34_AR3 ActiveIntergenicRegion 0 21.11 28.41 14.76 50.83 40.25 74.77 76.41 37.81 42.18 25.14 28.38 29.25 29.49 28.70 23.37 17.83 34.28 49.53 27.54 81.03 6.94 9.79 22.57 36 IG34_SR2 SilentIntergenicRegion 0 1.99 7.00 10.24 17.52 19.28 34.41 45.29 5.39 13.80 7.59 8.75 35.53 6.21 3.10 13.57 14.51 11.75 6.36 12.74 35.23 0.00 4.29 2.85 37 IG34_AR4 ActiveIntergenicRegion 0 20.93 13.50 25.70 45.66 53.74 92.30 78.19 26.41 35.30 13.73 18.31 79.73 16.81 17.59 11.85 38.80 26.13 21.61 20.44 87.41 0.92 11.05 14.36 38 IG34_AR5 ActiveIntergenicRegion 0 16.08 25.36 20.14 47.74 49.38 69.92 97.17 38.67 43.54 25.91 22.19 65.19 60.30 22.45 17.05 12.29 33.78 24.72 13.49 78.46 3.92 11.99 14.57